| Definition | Staphylococcus aureus subsp. aureus JH1, complete genome. |
|---|---|
| Accession | NC_009632 |
| Length | 2,906,507 |
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The map label for this gene is pgcA [H]
Identifier: 150395004
GI number: 150395004
Start: 2656296
End: 2658131
Strand: Direct
Name: pgcA [H]
Synonym: SaurJH1_2569
Alternate gene names: 150395004
Gene position: 2656296-2658131 (Clockwise)
Preceding gene: 150394992
Following gene: 150395005
Centisome position: 91.39
GC content: 33.33
Gene sequence:
>1836_bases ATGATATATCACTCTTACATCTACTCCATGCATTTTCATACACATCTATTATATAATACTTGTGAAAAGTATTGTCTTGG GGCTGTGTTTTTTTACTTTTGGGGCGTATTTCTTTATAATTCATTACATAAATGTAAGGGCTTTAGTTTTCATGTTTTAT TAAGTCTAACTGAGATTTTGAAAGGATGTTTAGCAACAATGGATAAAGAATTATGGATAGAAAGAGCTAATGATAGTTTA GTTAAACATTTTTATGAGCAGCAATCTGACATTGAACAGCGAGAAGGTTTTGAAAGTAAATTAACATTTGGTACTGCGGG TATACGCGGAAAATTCGGTCTTGGTGAAGGTCGACTTAATAAGTTTACTATTGAAAAATTGGCATTAGGTTTAGCGCGTT ATTTAAATGCCCAAACAAACAGTCCAACAATAGTCATTCATTATGATATTAGACATCTTTCAACTGAATTCGCCCAAATT ATTGCTAATGTATTAGCAAACCATCAAATAACAGTTTATTTACCTGATACATATAAAACGACACCGGAATTATCGTTCGC GGTTCGCAATCTTAATACTACTGCCGGCATTATGATTACAGCAAGTCATAATCCGAAAGACTATAACGGCATTAAAGTAT ATGGTTCTGATGGCGCGCAATTATCGACTGATGCATCTGAGCTTGCAAGTCGTTATATCGAAGAAGTTGGCGATCCATTA CAGATTGATATACCTATTTCAAAACAAAATACATCTTATATCAAACCTTTTCCGAAATCTGTAACTGATGACTATATGAA ACACATTCAAAATATGATTGGCTATATTCCTAAATCTGATTTACAAGTTGTGTTCACTAGTTTGCATGGTACAAGTGTTC CAATTGTACCTGAGTTATTAAAATCTTTGAATTTCAATCAATTTAATCTTGTAGATGCACAATGTAAACCTGATCCGAAT TTTAGTTCAGTTCAAAGTGCTAATCCTGAAGATCATCACGCTTTTGATCAAGCAGTCGAACTTGCAAATAAAAGTCATGC AGACTTATTAATATCAACTGACCCAGATGCAGATCGACTTGGTATTGCTGAACGTGATGCACATGGTCATATCACATATT TTAATGGCAACCAAATTGGTGCGCTGTTACTTAATTATCGTATTCAACAAACGTCTCAATTACGTCACCGCTTAATGATT CAATCTATTGTAAGTAGTGAGTTAACAAAGTCATTAGCACGCTATAATAATGTTAAATACAAAGAGGTACTGACGGGCTT TAAATTTATTGCTCAGGAAATAAGACAACTGGATGATCATCAAAATATGATTTTCGCATTTGAAGAGAGTTACGGTTTTC TATCAGAGCCTTTTGTACGTGATAAAGATGCCGTACAAATTGTGCCACTCATTATAAAATACGCTTCTGAGTTAAAATTA TATGGCAAAACATTGAAAGATGAATTAGAACAGATTTATCAAACTGTTGGTAGACATGAGGATACATTATTCTCGCATAC GCTAGAAGGATTAGAAGGTAAGAAAAAAATTGAATCAATTATGACACATTTCCGTTCAAATCCACCGCAAGAGATTCAAG GACTGAAAGTGAAAGCAATTGAAGATTATTTAACTAGCGAGGTTTATCATTTGGATAAAGATACAACGTCACAGATTAAT TCTTCTAAATCAAATGTTATTCGTGTCTTATTTGACGAAGGATTTATCGCTTTACGTCCTTCTGGTACTGAACCTAAAAT TAAATTATATGTGTCGTTAAAATGTCCGGATTTTGATGATGTAGCTCAAAAAATTAATGCGATGATTTTTAGCTAA
Upstream 100 bases:
>100_bases CTCACCCTTCAATTTAAAATCATCTTAATTGTTATTCTATCAAAAATTACAAAACTATATATAAATCAATATTAAAAATT AATATTTTACAATTTCCTGC
Downstream 100 bases:
>100_bases TTAAAAATTTTATACATCGAAATATTACATTTCATTTTATACTTATCAGCCCTTTTGAAACTAGAATCCTTATGTTTTCG CGTTTTGAAGGGGCTAATTT
Product: phosphoglucomutase/phosphomannomutase alpha/beta/subunit
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 611; Mature: 611
Protein sequence:
>611_residues MIYHSYIYSMHFHTHLLYNTCEKYCLGAVFFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSL VKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNSPTIVIHYDIRHLSTEFAQI IANVLANHQITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPL QIDIPISKQNTSYIKPFPKSVTDDYMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLKSLNFNQFNLVDAQCKPDPN FSSVQSANPEDHHAFDQAVELANKSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMI QSIVSSELTKSLARYNNVKYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKL YGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAIEDYLTSEVYHLDKDTTSQIN SSKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPDFDDVAQKINAMIFS
Sequences:
>Translated_611_residues MIYHSYIYSMHFHTHLLYNTCEKYCLGAVFFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSL VKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNSPTIVIHYDIRHLSTEFAQI IANVLANHQITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPL QIDIPISKQNTSYIKPFPKSVTDDYMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLKSLNFNQFNLVDAQCKPDPN FSSVQSANPEDHHAFDQAVELANKSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMI QSIVSSELTKSLARYNNVKYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKL YGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAIEDYLTSEVYHLDKDTTSQIN SSKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPDFDDVAQKINAMIFS >Mature_611_residues MIYHSYIYSMHFHTHLLYNTCEKYCLGAVFFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSL VKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNSPTIVIHYDIRHLSTEFAQI IANVLANHQITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPL QIDIPISKQNTSYIKPFPKSVTDDYMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLKSLNFNQFNLVDAQCKPDPN FSSVQSANPEDHHAFDQAVELANKSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMI QSIVSSELTKSLARYNNVKYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKL YGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAIEDYLTSEVYHLDKDTTSQIN SSKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPDFDDVAQKINAMIFS
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in the S.aureus membrane, which is also use
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=583, Percent_Identity=32.590051457976, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI31377548, Length=549, Percent_Identity=32.2404371584699, Blast_Score=229, Evalue=4e-60, Organism=Escherichia coli, GI1789566, Length=302, Percent_Identity=28.476821192053, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788361, Length=264, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71993870, Length=560, Percent_Identity=29.8214285714286, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71993878, Length=321, Percent_Identity=30.8411214953271, Blast_Score=132, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6323934, Length=552, Percent_Identity=27.7173913043478, Blast_Score=173, Evalue=8e-44, Organism=Drosophila melanogaster, GI20129809, Length=563, Percent_Identity=29.4849023090586, Blast_Score=220, Evalue=3e-57, Organism=Drosophila melanogaster, GI24651977, Length=537, Percent_Identity=28.4916201117318, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24653722, Length=533, Percent_Identity=29.0806754221388, Blast_Score=187, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 69470; Mature: 69470
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYHSYIYSMHFHTHLLYNTCEKYCLGAVFFYFWGVFLYNSLHKCKGFSFHVLLSLTEIL CEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KGCLATMDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCCH KFTIEKLALGLARYLNAQTNSPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKT HHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC TPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPL CCCHHHHEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHCCCCE QIDIPISKQNTSYIKPFPKSVTDDYMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELL EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCCCHHHHHH KSLNFNQFNLVDAQCKPDPNFSSVQSANPEDHHAFDQAVELANKSHADLLISTDPDADRL HHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHC GIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVKY CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKL HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHH EDYLTSEVYHLDKDTTSQINSSKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPDFDD HHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCEEEECCCCCCCEEEEEEEEECCCHHH VAQKINAMIFS HHHHHHHHHCC >Mature Secondary Structure MIYHSYIYSMHFHTHLLYNTCEKYCLGAVFFYFWGVFLYNSLHKCKGFSFHVLLSLTEIL CEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KGCLATMDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLN HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCCCH KFTIEKLALGLARYLNAQTNSPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKT HHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC TPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPL CCCHHHHEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHCCCCE QIDIPISKQNTSYIKPFPKSVTDDYMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELL EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCCCHHHHHH KSLNFNQFNLVDAQCKPDPNFSSVQSANPEDHHAFDQAVELANKSHADLLISTDPDADRL HHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHC GIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVKY CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKL HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHH EDYLTSEVYHLDKDTTSQINSSKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPDFDD HHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCEEEECCCCCCCEEEEEEEEECCCHHH VAQKINAMIFS HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA