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The map label for this gene is 150394895

Identifier: 150394895

GI number: 150394895

Start: 2544875

End: 2545312

Strand: Direct

Name: 150394895

Synonym: SaurJH1_2458

Alternate gene names: NA

Gene position: 2544875-2545312 (Clockwise)

Preceding gene: 150394894

Following gene: 150394897

Centisome position: 87.56

GC content: 29.68

Gene sequence:

>438_bases
ATGGAAGTGATGATATTGAACTTCAATCAATTCGAGAATCAAAACTTTTTTAACGGTAATCCAAGTGATACATTTAAAGA
TTTAGGTAAACAAGTATTTAATTACTTTTCAACACCTTCATTTGTAACGAATATATATGAAACAGACGAATTATATTACT
TAGAAGCTGAACTAGCAGGTGTAAATAAAGAAGATATTAGTATCGATTTCAATAATAATACGCTCACTATTCAAGCTACT
AGAAGCGCAAAATACAAATCTGAACAACTCATTTTAGATGAGCGTAACTTCGAATCATTAATGCGTCAATTTGATTTTGA
AGCTGTTGATAAGCAACATATTACTGCTAGTTTTGAAAATGGGTTATTAACCATTACATTGCCTAAAATCAAACCAAGCA
ATGAAACTACTTCATCAACATCTATTCCAATTTCATAG

Upstream 100 bases:

>100_bases
TCAGGCACAAATCTACCCATTTATAACTTTTTTATCTCCCCTTTTACTTTATCTTTTTTAATACTACTCATATAATGGCT
TTGTAATACAAATTTCTATA

Downstream 100 bases:

>100_bases
TTAAATTTAAAATGAATACACTACTAAAGCCTTAATGTCATGCTACGAATATTGTGCATGATATTAAGGCTTTGTATTTA
ACTAAATGAATGTCATGTAT

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEVMILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQAT
RSAKYKSEQLILDERNFESLMRQFDFEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS

Sequences:

>Translated_145_residues
MEVMILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQAT
RSAKYKSEQLILDERNFESLMRQFDFEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
>Mature_145_residues
MEVMILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQAT
RSAKYKSEQLILDERNFESLMRQFDFEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16665; Mature: 16665

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVMILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAG
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCEEEEEEEEECC
VNKEDISIDFNNNTLTIQATRSAKYKSEQLILDERNFESLMRQFDFEAVDKQHITASFEN
CCCCCEEEEECCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCHHCCCHHEEEECCC
GLLTITLPKIKPSNETTSSTSIPIS
CEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEVMILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAG
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCEEEEEEEEECC
VNKEDISIDFNNNTLTIQATRSAKYKSEQLILDERNFESLMRQFDFEAVDKQHITASFEN
CCCCCEEEEECCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCHHCCCHHEEEECCC
GLLTITLPKIKPSNETTSSTSIPIS
CEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9657935 [H]