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The map label for this gene is 150394870

Identifier: 150394870

GI number: 150394870

Start: 2520246

End: 2520689

Strand: Direct

Name: 150394870

Synonym: SaurJH1_2433

Alternate gene names: NA

Gene position: 2520246-2520689 (Clockwise)

Preceding gene: 150394869

Following gene: 150394871

Centisome position: 86.71

GC content: 28.38

Gene sequence:

>444_bases
ATGATGAAACTCAATTTATTTATCAATGCAAATGAGACGGAATCTTATATTGATATACATGCACCTAAAATGAATGATCA
CGTTCAAAGTATTATTAATGCAGTCAATGATTTAGACAAATCACATACATTAGTCGGATACATAGACAAAGAAATCCATA
TCATTAATGTATCAGATGTTATAACATTCCAAGTTATTAATAAAAATGTAACAGCCATTACAAGCAATCAAAAATTCAAA
CTAAAATTACGACTTTATGAACTAGAAAAACAGTTACCACAACATTTCATTCGCATTTCCAAATCAGAAATCGTCAACAA
GTATTACATTGAAAAATTATTATTAGAGCCAAATGGACTTATACGTATGTATCTTAAAGATGCACACTACACCTATTCTT
CTAGACGTTATTTAAAATCTATAAAGGAGCGCTTATCAATATGA

Upstream 100 bases:

>100_bases
CGCTTTCTAGCCACTTAACATTTAATTTCTACCATTCAACAAAATTTAAATATATCGATGGTCATTTATGGTTTAATAAT
TTTGAAGGAGGCATTAACCT

Downstream 100 bases:

>100_bases
AAAATTTGAAAAACTCATTATTTATTAGCTTAATCATTGGTTTGTCCCTTTCACTGTTCTTTAGTATGTTATTTGCAGAC
GGCAAATATTATCCACTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MMKLNLFINANETESYIDIHAPKMNDHVQSIINAVNDLDKSHTLVGYIDKEIHIINVSDVITFQVINKNVTAITSNQKFK
LKLRLYELEKQLPQHFIRISKSEIVNKYYIEKLLLEPNGLIRMYLKDAHYTYSSRRYLKSIKERLSI

Sequences:

>Translated_147_residues
MMKLNLFINANETESYIDIHAPKMNDHVQSIINAVNDLDKSHTLVGYIDKEIHIINVSDVITFQVINKNVTAITSNQKFK
LKLRLYELEKQLPQHFIRISKSEIVNKYYIEKLLLEPNGLIRMYLKDAHYTYSSRRYLKSIKERLSI
>Mature_147_residues
MMKLNLFINANETESYIDIHAPKMNDHVQSIINAVNDLDKSHTLVGYIDKEIHIINVSDVITFQVINKNVTAITSNQKFK
LKLRLYELEKQLPQHFIRISKSEIVNKYYIEKLLLEPNGLIRMYLKDAHYTYSSRRYLKSIKERLSI

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH LytTR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2153_STAAN (Q7A3W9)

Other databases:

- EMBL:   BA000018
- PIR:   F90036
- RefSeq:   NP_375476.1
- ProteinModelPortal:   Q7A3W9
- STRING:   Q7A3W9
- EnsemblBacteria:   EBSTAT00000001428
- GeneID:   1125081
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA2153
- eggNOG:   COG3279
- GeneTree:   EBGT00050000024061
- HOGENOM:   HBG704300
- OMA:   VQAPQET
- ProtClustDB:   CLSK885928
- BioCyc:   SAUR158879:SA2153-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR007492
- SMART:   SM00850

Pfam domain/function: PF04397 LytTR

EC number: NA

Molecular weight: Translated: 17339; Mature: 17339

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLNLFINANETESYIDIHAPKMNDHVQSIINAVNDLDKSHTLVGYIDKEIHIINVSDV
CEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCE
ITFQVINKNVTAITSNQKFKLKLRLYELEKQLPQHFIRISKSEIVNKYYIEKLLLEPNGL
EEEEEECCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IRMYLKDAHYTYSSRRYLKSIKERLSI
EEEEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKLNLFINANETESYIDIHAPKMNDHVQSIINAVNDLDKSHTLVGYIDKEIHIINVSDV
CEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCE
ITFQVINKNVTAITSNQKFKLKLRLYELEKQLPQHFIRISKSEIVNKYYIEKLLLEPNGL
EEEEEECCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IRMYLKDAHYTYSSRRYLKSIKERLSI
EEEEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146