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The map label for this gene is glvR [H]

Identifier: 150394829

GI number: 150394829

Start: 2479856

End: 2480620

Strand: Direct

Name: glvR [H]

Synonym: SaurJH1_2392

Alternate gene names: 150394829

Gene position: 2479856-2480620 (Clockwise)

Preceding gene: 150394826

Following gene: 150394837

Centisome position: 85.32

GC content: 29.93

Gene sequence:

>765_bases
ATGTTTTTAGATGAACACATTAATCGAAACTTTGATAAACTTAATGATAATGATTTACATATCGCTCACTTTATCAATAC
ACATATAGATGAATGTAAAAATATGAAAATACAAGATTTAGCGCAATTCACACATGCCTCGAATGCAACCATTCACAGAT
TTACACGCAAATTAGGTTTTGACGGTTATAGTGATTTTAAATCGTACCTTAAATTTGAAAGTAATAAGACACACCAATTA
CCTTCTAACTCTATCGATAGTTTCAAACAAGAAATCGATAGTACATTCAGTTATTTAGAACGCGTTGATTACCAGCTTCT
TACTGAAAAAATGCATACAGCTTCAACAATATATTTGTATGGTACAGGGCGTGCACAGTTAAACGTTGCTTCAGAGGCAC
AGCGTATATTGTTAACGTTACATAATCATGTCATTGTACTTCATGATGAACATGAACTTAAAATGATTTTGAACAAGAGT
GAACCTAATGATTTATTCTTTATTATTTCATTATCAGGTGAAACACATGAATTATTAGAAGTAACAAACTTGCTTCAACT
TAGACAAAAATACTTTATTTCTGTTACTACAATGAAAGATAATACCCTTGCTCAAAAAGCAAATTACAACGTCTATGTAT
CCAGTAACACATTCTACTTAACTGATGGTACAGACTATTCTAGCTTCATCAGTTATCATATATTCTTTGAAACACTTGTA
AGAAAATATAATGAGTATTTACTACATAATGATATTTCAAATTAG

Upstream 100 bases:

>100_bases
GCATAATCAAACCTATATCAATACACAAATATATATAATGACATACAAGATTTTAATGTAATAACGATCTATCACACATT
TATTTTCAAGGAGGTTGAAT

Downstream 100 bases:

>100_bases
AAAAAAGGAAGTTATGATTTAATGGCCTTGAGCCTATCATAACTTCCTTTTATCATTTTATTGTTGTGTTGATGTTTCGA
TAACGTGGTACATCTTATCA

Product: sugar isomerase (SIS)

Products: NA

Alternate protein names: Glv operon regulatory protein [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGFDGYSDFKSYLKFESNKTHQL
PSNSIDSFKQEIDSTFSYLERVDYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKS
EPNDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
RKYNEYLLHNDISN

Sequences:

>Translated_254_residues
MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGFDGYSDFKSYLKFESNKTHQL
PSNSIDSFKQEIDSTFSYLERVDYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKS
EPNDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
RKYNEYLLHNDISN
>Mature_254_residues
MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGFDGYSDFKSYLKFESNKTHQL
PSNSIDSFKQEIDSTFSYLERVDYQLLTEKMHTASTIYLYGTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKS
EPNDLFFIISLSGETHELLEVTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
RKYNEYLLHNDISN

Specific function: Positive regulator of the glv operon expression, which consists of glvA, glvR and glvC [H]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 29786; Mature: 29786

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF
CCCHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCC
DGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERVDYQLLTEKMHTASTIYLY
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
GTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEPNDLFFIISLSGETHELLE
ECCCEEEEEHHHHHHHHEEECCCEEEEECCCEEEEEECCCCCCCEEEEEEECCCHHHHHH
VTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
HHHHHHHHHHHEEEEEEECCCHHHHHCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHH
RKYNEYLLHNDISN
HHHHHHHHHCCCCC
>Mature Secondary Structure
MFLDEHINRNFDKLNDNDLHIAHFINTHIDECKNMKIQDLAQFTHASNATIHRFTRKLGF
CCCHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCC
DGYSDFKSYLKFESNKTHQLPSNSIDSFKQEIDSTFSYLERVDYQLLTEKMHTASTIYLY
CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
GTGRAQLNVASEAQRILLTLHNHVIVLHDEHELKMILNKSEPNDLFFIISLSGETHELLE
ECCCEEEEEHHHHHHHHEEECCCEEEEECCCEEEEEECCCCCCCEEEEEEECCCHHHHHH
VTNLLQLRQKYFISVTTMKDNTLAQKANYNVYVSSNTFYLTDGTDYSSFISYHIFFETLV
HHHHHHHHHHHEEEEEEECCCHHHHHCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHH
RKYNEYLLHNDISN
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377; 11489864 [H]