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The map label for this gene is ureF

Identifier: 150394796

GI number: 150394796

Start: 2445427

End: 2446116

Strand: Direct

Name: ureF

Synonym: SaurJH1_2359

Alternate gene names: 150394796

Gene position: 2445427-2446116 (Clockwise)

Preceding gene: 150394795

Following gene: 150394797

Centisome position: 84.14

GC content: 32.9

Gene sequence:

>690_bases
ATGATTGATCATACACACTTAAGATTATTTCAGTTCTGTGATTCACAGTTTCCAACAGGTGCTTTCAGTCATTCATTTGG
TCTTGAAACATATATTCAACGAAATATAATTCATGACGATCATACTTTTATTGCTTGGTTAAAAATGTTTTTACAAGAGC
AACTTACCTATTCTGATGGTTTAGCCATGCGTTTAGTTTATGATGCATTGGAAAATGATGATACACAAAAAGTATTACAC
ATAGATAAACTGATGTTTGTTCAAAACTTACCTAAAGAAACACGTGTTGGTGCAAAACAAATGGGGACTCGCATGGTTAA
ATTGGCTTTAGAACTTTATAATAGCCCATGGATTGCTTGGTATCATCAACAAATGCAAGATAAGAAAGCAAAGTTAAATC
CAGCTATTTGTTTTACTATGCTAGGCCATCATTTAGGTGTAGATATTGAAACGATTATTGATTACTATTTATATCAAAAT
GTTTCAAGTTTAACTCAAAATGCTGTTCGTGCTATTCCACTTGGACAAACTGCTGGTCAAAAGATAGTTACTCACATGAT
TCCTTATATAGAAGAAACAAGAAAGCAGATTTTCGAATTAAAAGAAGCAGATTTTGGCATGACAGCGCCTGGTTTAGAAC
TAAATCAAATGGCGCATGAGAACGTCAATGTTAGAATTTTCATATCATAG

Upstream 100 bases:

>100_bases
TATGATTATTTAGTTGAAGATTTATTAAAAAGTTTAGGCATCCCATATGTTCGAGAAGACCGTAAAGTTAATAAGGCTTT
CAGACATATAGGGCATTCTC

Downstream 100 bases:

>100_bases
GAGGTTATAATTGTGGCAAATCCGATTAAAATTGGTATTGGTGGTCCTGTAGGTGCAGGTAAAACACAATTAATTGAAAA
AGTTGTAAAACGTCTTTCAA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLH
IDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQN
VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS

Sequences:

>Translated_229_residues
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLH
IDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQN
VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
>Mature_229_residues
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLH
IDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQN
VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_STAA1 (A7X5M5)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442866.1
- STRING:   A7X5M5
- EnsemblBacteria:   EBSTAT00000003666
- GeneID:   5561571
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2276
- eggNOG:   COG0830
- GeneTree:   EBGT00050000024014
- HOGENOM:   HBG709295
- OMA:   FIRYETH
- ProtClustDB:   CLSK885868
- BioCyc:   SAUR418127:SAHV_2276-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 26552; Mature: 26552

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
CCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
YHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
CCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRMVKLALELYNSPWIAW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
YHQQMQDKKAKLNPAICFTMLGHHLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA