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The map label for this gene is fdhD

Identifier: 150394784

GI number: 150394784

Start: 2435043

End: 2435840

Strand: Direct

Name: fdhD

Synonym: SaurJH1_2347

Alternate gene names: 150394784

Gene position: 2435043-2435840 (Clockwise)

Preceding gene: 150394778

Following gene: 150394792

Centisome position: 83.78

GC content: 34.46

Gene sequence:

>798_bases
ATGAACAAAGATGTATCTTTAGGTCAACCAATTGTTAGATATGAAGATGGAAAATTATTCAATACAACAGATCAATATGT
GACAGAATTTCCACTTACAATTATGGTGAATGGTGAAGAATTTGCGACTGTTATATGCAGTCCAACAAACCTTGAGGAGT
TAGTCATTGGATTTCTGGCTTCGGAAGGTGCCATTTTAAAGCGAGATGAATTAAAATCTGTGCTGATTGATGATAGTAAA
GGTTTTGCCCATGTTGAACTTAATAAAGATTTAGGCGATCGCTTTCAATATTCCACAAAACGAATGATTGCATCTTGTTG
TGGAAAGAGTCGTGAGTTTTATTTTCAAAATGATGCTGCTATCGCTAAAACTTCTATGTCTAAAATCACTTTAACTCCAA
TACAAATTATTAACATGATGACTCGATTACAAAGTGCAAGTCATATTTACCAAGAAACAGGTGGCTTACATAATGCTGCT
ATAAGCGATGGTTTGACATTTTTTGTACATCGACAAGACATTGGTAGACATAACGCTCTAGATAAATTATATGGATTTTG
TATCCAGCGACATATTACTGTCCGAGATAAAGTATTAATTTTTAGTGGACGTATTTCATCAGAAATTTTAATTAAAGCCG
CGAAAATCGGTGTTGGCGTCATTTTATCTAAATCAGCTCCGACAACGCTTGCTGTAACCTTAGCTAATGACCTAAATATT
ACGGCAGTAGGTTTTATTCGAAATGGTGGCTTTAATATATATAGTCATCCAGAACGTATCATCGACTCTGAACAATAA

Upstream 100 bases:

>100_bases
TATTAATTTTATAAATCAAATTTCAAACTTAAGCAAATATGTTAAAATTTTAAGCAAATTGCTTTAAAATAAAGTTTAAG
CTAATTAAAGGGGTTAGATA

Downstream 100 bases:

>100_bases
CATATTCATTATAGTGTGTCATAATGAACGATATTCTACATGAATCAACAATTTAAACGCACTATTTTTATAAGTATAAG
TAGCTCAAAACAATTTAAAA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSK
GFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAAIAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAA
ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
TAVGFIRNGGFNIYSHPERIIDSEQ

Sequences:

>Translated_265_residues
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSK
GFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAAIAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAA
ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
TAVGFIRNGGFNIYSHPERIIDSEQ
>Mature_265_residues
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSK
GFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAAIAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAA
ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
TAVGFIRNGGFNIYSHPERIIDSEQ

Specific function: Necessary for formate dehydrogenase activity

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family

Homologues:

Organism=Escherichia coli, GI1790329, Length=246, Percent_Identity=30.0813008130081, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHD_STAA1 (A7X5K8)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442854.1
- ProteinModelPortal:   A7X5K8
- SMR:   A7X5K8
- STRING:   A7X5K8
- EnsemblBacteria:   EBSTAT00000004816
- GeneID:   5560360
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2264
- eggNOG:   COG1526
- GeneTree:   EBGT00050000025399
- HOGENOM:   HBG732883
- OMA:   PEECFYL
- ProtClustDB:   PRK00724
- BioCyc:   SAUR418127:SAHV_2264-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00187
- InterPro:   IPR003786
- TIGRFAMs:   TIGR00129

Pfam domain/function: PF02634 FdhD-NarQ

EC number: NA

Molecular weight: Translated: 29398; Mature: 29398

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
CCCCCCCCCCEEEECCCCEECCHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHHHHHH
SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
CCCCEEEHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
IAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
EEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCCCHHHH
DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
HHHHHHHHHHCCEEEEEEEEEECCCCCHHEEEEECCCEEEEEECCCCCEEEEEEECCCCE
TAVGFIRNGGFNIYSHPERIIDSEQ
EEEEEEECCCCCEECCCHHHCCCCC
>Mature Secondary Structure
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
CCCCCCCCCCEEEECCCCEECCHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHHHHHH
SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
CCCCEEEHHHHHEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
IAKTSMSKITLTPIQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
EEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCCCHHHH
DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
HHHHHHHHHHCCEEEEEEEEEECCCCCHHEEEEECCCEEEEEECCCCCEEEEEEECCCCE
TAVGFIRNGGFNIYSHPERIIDSEQ
EEEEEEECCCCCEECCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA