Click here to switch to the map view.

The map label for this gene is 150393398

Identifier: 150393398

GI number: 150393398

Start: 960774

End: 961049

Strand: Direct

Name: 150393398

Synonym: SaurJH1_0930

Alternate gene names: NA

Gene position: 960774-961049 (Clockwise)

Preceding gene: 150393397

Following gene: 150393399

Centisome position: 33.06

GC content: 38.41

Gene sequence:

>276_bases
ATGGATATCGGTACAATCGTAAGAACAATTTTATTAATAGTCGCATGGATCAATCAGTTTTTAGCAATCAAACATATTTC
TCCAATCCCAGTTGACGAAGTGTTTATAAGCACAGTCGTTACTGGGATTGTTTCAATTTGGACGTGGTGGAAGAATAACA
ACTTTACTCACGCATCTAAGAAAGGGCAACAAAAAATTTATGAAGTAAAAGCTGGCATTCAGTCAACTGGTGGCGCACCT
AAAGTGAACGGAGATGATAACAATGCCGTCGGTTAG

Upstream 100 bases:

>100_bases
ATAAGTGATGTTTATTCAGGATCTCCGACATTGACCATTGAATAATTTTAAACGACTAATTTTTTAGTCGTTTTTTATTT
TGGATAAAAGGAGTAAACAA

Downstream 100 bases:

>100_bases
GACATACAGTCAAGCTATTAGTTATCTTAAAAGTTTAGAGGGTAAGGCGTGGAATCCAGACAATGCATTTGGATGTCAAT
GCTTCGATACTGCTAACCAA

Product: SPP1 family holin

Products: NA

Alternate protein names: SPP1 Family Holin

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MDIGTIVRTILLIVAWINQFLAIKHISPIPVDEVFISTVVTGIVSIWTWWKNNNFTHASKKGQQKIYEVKAGIQSTGGAP
KVNGDDNNAVG

Sequences:

>Translated_91_residues
MDIGTIVRTILLIVAWINQFLAIKHISPIPVDEVFISTVVTGIVSIWTWWKNNNFTHASKKGQQKIYEVKAGIQSTGGAP
KVNGDDNNAVG
>Mature_91_residues
MDIGTIVRTILLIVAWINQFLAIKHISPIPVDEVFISTVVTGIVSIWTWWKNNNFTHASKKGQQKIYEVKAGIQSTGGAP
KVNGDDNNAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9976; Mature: 9976

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGTIVRTILLIVAWINQFLAIKHISPIPVDEVFISTVVTGIVSIWTWWKNNNFTHASK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
KGQQKIYEVKAGIQSTGGAPKVNGDDNNAVG
HHHHHHHHHHHCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDIGTIVRTILLIVAWINQFLAIKHISPIPVDEVFISTVVTGIVSIWTWWKNNNFTHASK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
KGQQKIYEVKAGIQSTGGAPKVNGDDNNAVG
HHHHHHHHHHHCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA