| Definition | Staphylococcus aureus subsp. aureus JH1, complete genome. |
|---|---|
| Accession | NC_009632 |
| Length | 2,906,507 |
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The map label for this gene is 150393396
Identifier: 150393396
GI number: 150393396
Start: 959079
End: 960317
Strand: Direct
Name: 150393396
Synonym: SaurJH1_0928
Alternate gene names: NA
Gene position: 959079-960317 (Clockwise)
Preceding gene: 150393395
Following gene: 150393397
Centisome position: 33.0
GC content: 33.9
Gene sequence:
>1239_bases ATGTACAAAATAAAAGATGTTGAAACGAGAATAAAAAATGATGGTGTTGACTTAGGTGACATTGGCTGTCGATTTTACAC TGAAGATGAAAATACAGCATCTATAAGAATAGGTATCAATGACAAACAAGGTCGTATCGATCTAAAAGCACATGGCTTAA CACCTAGATTGCATTTGTTTATGGAAGATGGCTCTATATTCAAAAATGAGCCCCTTATTATGGACGATGTTGTAAAAGGG TTCATTACCTACAAGATACCTAAAAAGGTTATCAAACACGCTGGTTATGTTCGTTGTAAGCTGTTTTTAGAGAAAGAAGA AGAAAAAATACATGTCGCGAACTTTTCTTTCAATATCGTTGATAGTGGCATTGAATCTGCTGTAGCAAAAGAAATCGATG TTAAATTGGTAGATGATGCTATTACGAGAATTTTAAAAGATAACGCGACAGATTTATTGAGCAAAGACTTTAAAGAGAAA ATAGATAAAGATGTCATTTCTTACATCGAAAAGAATGAAAGTAGATTTAAAGGTGCGAAAGGTGATAAAGGCGAACCGGG ACAACCTGGAGCAAAAGGTGAAGCAGGTAAAAAAGGAGAACAAGGCGCACCCGGTAAAAACGGTACTGTAGTATCAATCA ATCCTGACACTAAAATGTGGCAAATTGATGGTAAAGATACAGATATCAAAGCAGAACCTGAGTTATTGGACAAAATCAAT ATCGCAAATGTTGAAGGGTTAGAAAATAAATTGCAAGAAGTTGAAAAAATCAAAGATACAACTCTCAACGACTCTAAAAC GTATACGGATTCAAAAATTGCTGAACTAGTTGATAGCGCGCCTGAATCTATGAATACATTAAGAGAATTAGCAGAAGCAA TACAAAACAACTCTATTTCAGAAAGTGTATTGCAACAGATTGGCTCAAAAGTTAGTACAGAAGATTTTGAGGGATTCAAG CAATCATTAAACAGTTTGTATGCAGATAAAAATCATAGTCATACAATCAAACAGATTGAAGGATTAGAAAATGCTTTATC AAAAAAATCAGACATAAATCACAGTCATGATGAACGTTATCTTTTATCATCAAATGCTTTTACAAAAGAGGAAGCAGATA AACTTTATCAACCTATCGGTTCTTCGCAGCCGTCACTGAATATTTGGACAGGCAGTGAAACAGAATATAATTATTTGTAT CAAAAAGACCCTAATACACTTTATTTAATTAAGGGGTGA
Upstream 100 bases:
>100_bases GTGCCAACATCAAGCTAGTACAATCGCTAAGCTATATAAACAAATCGGCTTAAAAGGTATCTACTTTATAAGAGATAAAT ATAAATAAAGAGGTGTATAA
Downstream 100 bases:
>100_bases TTTTTATGGAAGGTAATTTTAAAAATGTAAAGAAGCTTATTTACGAAGGCGAAGCATATACAAAAGTATATGCTGGAAAT ATCCAAATATGGAAAAAGCC
Product: tail fiber
Products: NA
Alternate protein names: Phage Tail Fiber; Phage-Related Tail Fiber
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIMDDVVKG FITYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEK IDKDVISYIEKNESRFKGAKGDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKIN IANVEGLENKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFEGFK QSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERYLLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLY QKDPNTLYLIKG
Sequences:
>Translated_412_residues MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIMDDVVKG FITYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEK IDKDVISYIEKNESRFKGAKGDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKIN IANVEGLENKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFEGFK QSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERYLLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLY QKDPNTLYLIKG >Mature_412_residues MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIMDDVVKG FITYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEK IDKDVISYIEKNESRFKGAKGDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKIN IANVEGLENKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFEGFK QSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERYLLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLY QKDPNTLYLIKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46086; Mature: 46086
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLF CCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEE MEDGSIFKNEPLIMDDVVKGFITYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIV EECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEEEEEEH DSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEKIDKDVISYIEKNESRFKGAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC GDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHCC IANVEGLENKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSIS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH ESVLQQIGSKVSTEDFEGFKQSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERY HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE LLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLYQKDPNTLYLIKG EECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEC >Mature Secondary Structure MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLF CCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEE MEDGSIFKNEPLIMDDVVKGFITYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIV EECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEEEEEEH DSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEKIDKDVISYIEKNESRFKGAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC GDKGEPGQPGAKGEAGKKGEQGAPGKNGTVVSINPDTKMWQIDGKDTDIKAEPELLDKIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHCC IANVEGLENKLQEVEKIKDTTLNDSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSIS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHH ESVLQQIGSKVSTEDFEGFKQSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERY HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE LLSSNAFTKEEADKLYQPIGSSQPSLNIWTGSETEYNYLYQKDPNTLYLIKG EECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA