Definition Clostridium beijerinckii NCIMB 8052 chromosome, complete genome.
Accession NC_009617
Length 6,000,632

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The map label for this gene is trmE

Identifier: 150019907

GI number:

Start: 5996632

End: 5998020

Strand: Reverse

Name: trmE

Synonym: Cbei_5099

Alternate gene names: NA

Gene position: NA

Preceding gene: 150019908

Following gene: 150019906

Centisome position: NA

GC content: NA

Gene sequence:

>1389_bases
ATGAAAGAATTTGATACTATTTGTGCGATCGCTACACCAATCGGAGAAGGCGGAGTTTCAATAATAAGAATTTCAGGGGA
GAATGTTTTAAAGATTGCTAGTAAGATATTTACTCCTAGGAATAAATACGATATTGAAAGCATGAAAACATACACTATGA
AGTATGGTAATATTGTGGATTTAGAGAACAAAAAAGAGATAATTGATGAAGTTATTTTAAGTTATATGAAAGCGCCAAGA
AGCTATACGGGTGAAAACGTGGTAGAAATAAATTGTCATGGAGGAGTTATATCTACTAATAGTGTATTAGATCAGGTTAT
CAAAGCTGGTGCAAGACTTGCAGAACCTGGAGAATTTACTAAAAGAGCATTTTTAAATGGAAGAATAGATTTGAGTCAGG
CCGAAGCAGTTATGGATATAATAACTGCTAAAACAGAGTTATCGATGAAAGCCGCTATGATTCAAAGCAAAGGGGCTTTA
TCTAAAGAAATAAATGAATTAAGAGGGTATTTGCTAAACGTTTTAGCGCTAATTGAATATGCAGTTGATTTTACAGAGGA
TGATGAGGATATCGTTGATGACAATTTAATTTTACAGATTAAAGATGGGATCGAGAATACAAATTCAAAAATTGAAACCT
TATTGTCTAATGCGGATGCGGGTAAAATTGTGAGAGATGGACTCAATATAGTTATTGTAGGAAAACCAAATGTAGGAAAA
TCTTCATTACTTAATGCATTATTAAGAGAAAATAGAGCTATAGTAACAGATGTCCCAGGGACAACTAGAGATATAATTGA
GGAATATATAAATCTTGATGGAATACCGGTTAAAATAACCGATACAGCAGGAATAAGAGATACAGAAGATGTAGTAGAAA
AAATAGGTGTGGAAAAATCAAAAGAGAAAATTGAAGAAGCAGATCTAATAATACTCATGCTTGATGCATCTAGATATATA
GATGAAGAAGACAGTAGAATAATTAATAAAATAAAGAATAGAAAATATATAGTATTATTAAATAAGATGGATTTGAAAGA
TATAAAAATTCAAGAAGAAATACTTAAGAATTTAAGTAATATAATAAATATATCAGCTAAAACTGGCCAAGGAATAGATA
TTTTAAAAGATGAAGTTAAAAAGTTATTCTTTAATGGAGAGATAAGCTCTGAAAGCTTAATAATTTCTAATGCACGACAT
AAGCAAGCTTTATATAAATCATTAGAAAATTGTAAAATGGCTTTAGATAAAATTAATGCTAATGAATATCTTGATTTAAT
ATCAATTTATATAACAGCGGCTATGAAAGCTTTAGGAGAAATAACTGGAGATGAATTAGAAGAAGATTTATTAAACAAAA
TTTTTAGTGAATTTTGTGTAGGAAAGTAG

Upstream 100 bases:

>100_bases
ATAACTTTGACTATTTAAATTTTGTTATGTAAAATTGATAATAGTTAAAAAGGAGTTTTAGTTTAGAAAATATTCTTCTT
TAAAAAGAGGAGGAAATTAA

Downstream 100 bases:

>100_bases
GTAAAAGTAATGGCAGTAAATTATGATGGTGGTCAATTCGATATAGTTGTTGTTGGTGCAGGTCATGCGGGATGTGAAGC
TGCATTGGCATCAGCAAGAT

Product: tRNA modification GTPase TrmE

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>462_residues
MKEFDTICAIATPIGEGGVSIIRISGENVLKIASKIFTPRNKYDIESMKTYTMKYGNIVDLENKKEIIDEVILSYMKAPR
SYTGENVVEINCHGGVISTNSVLDQVIKAGARLAEPGEFTKRAFLNGRIDLSQAEAVMDIITAKTELSMKAAMIQSKGAL
SKEINELRGYLLNVLALIEYAVDFTEDDEDIVDDNLILQIKDGIENTNSKIETLLSNADAGKIVRDGLNIVIVGKPNVGK
SSLLNALLRENRAIVTDVPGTTRDIIEEYINLDGIPVKITDTAGIRDTEDVVEKIGVEKSKEKIEEADLIILMLDASRYI
DEEDSRIINKIKNRKYIVLLNKMDLKDIKIQEEILKNLSNIINISAKTGQGIDILKDEVKKLFFNGEISSESLIISNARH
KQALYKSLENCKMALDKINANEYLDLISIYITAAMKALGEITGDELEEDLLNKIFSEFCVGK

Sequences:
NA

Specific function: NA

COG id: COG0486

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA