| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150010427
Identifier: 150010427
GI number: 150010427
Start: 4704082
End: 4704681
Strand: Direct
Name: 150010427
Synonym: BDI_3867
Alternate gene names: NA
Gene position: 4704082-4704681 (Clockwise)
Preceding gene: 150010426
Following gene: 150010428
Centisome position: 97.77
GC content: 49.33
Gene sequence:
>600_bases ATGAAAAGATATGACATAAGAGTAAGGTATTCCTTCGAGGGCACTTACACGGTAGCGGCAGAAGACCGCGATGAAGCAAA AAGAATGGTAAATGACGATTGCGGTCTTGTTTTGGGCGGCGATATCCACACGACACGCGATGACGATGAAGTGTTGGACT GGGATTTCTGTATCCATCCCGACACGCGGATTCTCTCCTTGCAGGAAAGAGGCGGAAAAGGAAGTTTACCGTCAGAAGCC GTTGATTTCAGCGGCAGGATCAAGGAACTGCGGGGGGACATCATCGACGCGATACGGCAGTTGCTCCATACTCACTGCAT GAAAGAAATTCGTCTTCCGGAAGAGGATTATGATCCGGTCTGGGTGATATGGTTTGGCAAGAACGGAGAACTATATGAAT GCAGGGTGACAGGACTCCGGGTAACGGCGGACAGCCTGACCGTCCTTGCCAAAGAGAAAGAAAGCGGTGACGAGGTGCAG TGTCACAGCCCGTTTGAACTCGGCGCAAAGAACATAGACTGGCTTCATGAGATGTATGAGGCTGTGTGGCATCAACTGAG AGAAACAAACAATGTAGAATCACAAATAGAAGAACCATGA
Upstream 100 bases:
>100_bases CGTTTTACAGGCTTGACCCACATGCCTTTAGCGCAATATTGAATATCCGGTAATCCTTCCGGGCAATGAATCTGGTATCA ACAATCAAATGGAAAGAATC
Downstream 100 bases:
>100_bases AATATCAAGCGGAAAATACCGTCTCCAGTTTCTTCTACTACATGTGGAACGCCTGGAGCGAGGAGGAATGCAAAGCCGTG TATGGCGGCATGTACCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKRYDIRVRYSFEGTYTVAAEDRDEAKRMVNDDCGLVLGGDIHTTRDDDEVLDWDFCIHPDTRILSLQERGGKGSLPSEA VDFSGRIKELRGDIIDAIRQLLHTHCMKEIRLPEEDYDPVWVIWFGKNGELYECRVTGLRVTADSLTVLAKEKESGDEVQ CHSPFELGAKNIDWLHEMYEAVWHQLRETNNVESQIEEP
Sequences:
>Translated_199_residues MKRYDIRVRYSFEGTYTVAAEDRDEAKRMVNDDCGLVLGGDIHTTRDDDEVLDWDFCIHPDTRILSLQERGGKGSLPSEA VDFSGRIKELRGDIIDAIRQLLHTHCMKEIRLPEEDYDPVWVIWFGKNGELYECRVTGLRVTADSLTVLAKEKESGDEVQ CHSPFELGAKNIDWLHEMYEAVWHQLRETNNVESQIEEP >Mature_199_residues MKRYDIRVRYSFEGTYTVAAEDRDEAKRMVNDDCGLVLGGDIHTTRDDDEVLDWDFCIHPDTRILSLQERGGKGSLPSEA VDFSGRIKELRGDIIDAIRQLLHTHCMKEIRLPEEDYDPVWVIWFGKNGELYECRVTGLRVTADSLTVLAKEKESGDEVQ CHSPFELGAKNIDWLHEMYEAVWHQLRETNNVESQIEEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23000; Mature: 23000
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYDIRVRYSFEGTYTVAAEDRDEAKRMVNDDCGLVLGGDIHTTRDDDEVLDWDFCIHP CCCEEEEEEEEECCEEEEEECCHHHHHHHHCCCCCEEECCCEECCCCCCCEEEEEEEECC DTRILSLQERGGKGSLPSEAVDFSGRIKELRGDIIDAIRQLLHTHCMKEIRLPEEDYDPV CCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE WVIWFGKNGELYECRVTGLRVTADSLTVLAKEKESGDEVQCHSPFELGAKNIDWLHEMYE EEEEECCCCCEEEEEEEEEEEECCCEEEEEECCCCCCEEEECCCHHCCCCCHHHHHHHHH AVWHQLRETNNVESQIEEP HHHHHHHHCCCCHHHCCCC >Mature Secondary Structure MKRYDIRVRYSFEGTYTVAAEDRDEAKRMVNDDCGLVLGGDIHTTRDDDEVLDWDFCIHP CCCEEEEEEEEECCEEEEEECCHHHHHHHHCCCCCEEECCCEECCCCCCCEEEEEEEECC DTRILSLQERGGKGSLPSEAVDFSGRIKELRGDIIDAIRQLLHTHCMKEIRLPEEDYDPV CCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE WVIWFGKNGELYECRVTGLRVTADSLTVLAKEKESGDEVQCHSPFELGAKNIDWLHEMYE EEEEECCCCCEEEEEEEEEEEECCCEEEEEECCCCCCEEEECCCHHCCCCCHHHHHHHHH AVWHQLRETNNVESQIEEP HHHHHHHHCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA