| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010378
Identifier: 150010378
GI number: 150010378
Start: 4648287
End: 4648667
Strand: Direct
Name: 150010378
Synonym: BDI_3815
Alternate gene names: NA
Gene position: 4648287-4648667 (Clockwise)
Preceding gene: 150010377
Following gene: 150010379
Centisome position: 96.61
GC content: 56.17
Gene sequence:
>381_bases ATGTCTTCCCTTCCCTCCGGTATTCGCTTGGTCGCATTGCTAAACGAACACCTGAACGAGATCATGGAGCGTGAGCGCAT GAACCATACCTCGATCCACTTATATTGTACAGGACCTTATTGGGTGGCTTTCGAGCGTTCGGCCTACCAGCTGCATCGTG CGTTCCCGGATAGCGAGACCACACCGCTGCGCCTGTTCGCCTACCCGTTCCCAATCGTGATGGTCTCCGTTACGGATCGC TCGCTGCGTTCCTACGCCCGTAAACATATCTTGCGGTGGGACGAGACGGATTACGTGGTACTAACTGCTCCCGAATCCTC TTCGACCGACTACCGAAGATGGCATGCCGGTGAGGTGGAGGGCTTGCCCCAGCTGACATGA
Upstream 100 bases:
>100_bases TAAATTATCTTTGATCCGTCGGTTGGCTGATTACGACCGGTGGCTGAAACATAATGAATAATTCAAAATTCATAATTTAC AATTCATAATTCAAAAAGAA
Downstream 100 bases:
>100_bases ACCAAAAATTTTATTCATGATGAACCTTTTTTCTAAACTCTCAACGTGGTATTTCTCAAGGAAAGCGTTGCCGTATTGGA GCATTATCCTGTTGGATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSSLPSGIRLVALLNEHLNEIMERERMNHTSIHLYCTGPYWVAFERSAYQLHRAFPDSETTPLRLFAYPFPIVMVSVTDR SLRSYARKHILRWDETDYVVLTAPESSSTDYRRWHAGEVEGLPQLT
Sequences:
>Translated_126_residues MSSLPSGIRLVALLNEHLNEIMERERMNHTSIHLYCTGPYWVAFERSAYQLHRAFPDSETTPLRLFAYPFPIVMVSVTDR SLRSYARKHILRWDETDYVVLTAPESSSTDYRRWHAGEVEGLPQLT >Mature_125_residues SSLPSGIRLVALLNEHLNEIMERERMNHTSIHLYCTGPYWVAFERSAYQLHRAFPDSETTPLRLFAYPFPIVMVSVTDRS LRSYARKHILRWDETDYVVLTAPESSSTDYRRWHAGEVEGLPQLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14698; Mature: 14567
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPSGIRLVALLNEHLNEIMERERMNHTSIHLYCTGPYWVAFERSAYQLHRAFPDSET CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECHHHHHHHCCCCCCC TPLRLFAYPFPIVMVSVTDRSLRSYARKHILRWDETDYVVLTAPESSSTDYRRWHAGEVE CCEEEEECCCEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEECCCCCC GLPQLT CCCCCC >Mature Secondary Structure SSLPSGIRLVALLNEHLNEIMERERMNHTSIHLYCTGPYWVAFERSAYQLHRAFPDSET CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECHHHHHHHCCCCCCC TPLRLFAYPFPIVMVSVTDRSLRSYARKHILRWDETDYVVLTAPESSSTDYRRWHAGEVE CCEEEEECCCEEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEECCCCCC GLPQLT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA