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The map label for this gene is omp85 [H]

Identifier: 150010270

GI number: 150010270

Start: 4517095

End: 4519785

Strand: Direct

Name: omp85 [H]

Synonym: BDI_3699

Alternate gene names: 150010270

Gene position: 4517095-4519785 (Clockwise)

Preceding gene: 150010269

Following gene: 150010271

Centisome position: 93.88

GC content: 45.78

Gene sequence:

>2691_bases
ATGTACAAAAGAATAGTGCTGTTTTTTATTTGCTTGGGTTTCGCTTGCGGTGCGTTTGCCCAAGAAATAGACACTACCCA
AGTTGAGACGCCGGCAGAAGTGCCGGTCATTTCGTACTCGTTGGCCGCGAAGAAATACAAGATTGCGGATATAAAGATTA
CGGGTATCAAGAATTATGATGATTTTGTGTTGATCGGCTTCTCGGGCTTGTCGGTAGGCGATGAGATTACCGTACCGGGA
GAGGAGATCACTACAGCAGTGAAGCGTTTTTGGAAACATGGCTTGTTTTCGGATGTGAAGATCTTGGCGACGAAGATCGA
GGGCGACCAGATTTGGCTGGAGATCCAGCTGAAGCAGCGTCCGCGTATCTCGCAAGTCAATTACCACGGGATCAAGAAAG
GCGAGCGTGAGGACTTGGAGGCGAAGCTGGGCTTGAAGAAAGGTTTCCAGGTGACGCCGAACGTCATGGACCGTGCCAAG
ATCGTGATCCAGAAGTTCTTCGATGGCAAAGGCTTTAAGAACGTGGATGTCGAGATCGAGCAAAAGGACGATCCCGCGAA
TGAAGGCGAGGTGATCGTGGATATCAATATCGATAAGAATGAAAAGACCAAGATCCATCGTATCTATTTTGAGGGTAACG
AAAAACTGACCGCCCGGGAGTTGAAGAAGGCGATGAAGAAGACGAACGAGAAGTTCAGCTTGCCGAACGACTGGAAAACC
AGTATCATGGAGATGTTCAGCACGAAGAAGTTCACGACTGAGGAATATGAGAACGATAAGAAAAATATAATCGCTAAATA
TAACGAGCATGGTTATCGCGACGCCGTATTGTTGTCCGATAGCGTAGCGAACTTTAACGAGAAGAAGGTAGATATCTTCT
TGAAAGTGGATGAAGGTGAGAAATACTATTTGAAAGATATTCGCTTCGTGGGTAATACGCAATATTCTACGGACTATTTG
ATGGCCGTGCTGGGTATGAAACCGGGCGAGGTGTATAATCAAAAGAAATTGAACGAACGTTTGAGTACGGATGAGGATGC
CGTTTCGAATGTCTATTTTAATAACGGTTATTTGTTCTTCAACGCCGATCCGGTAGAGGTGGATGTAGCGAATGACTCTA
TCTCGTTAGAGATCCGTATCCAAGAGGGTCCGCAAGCGACGATCAACCGTATTATCATTAATGGTAATGACCGTCTGTAT
GAGGATATCGTTCGCCGTGAGTTGCGTACGAAGCCGGGTATGTTGTTCAGCCGCGAGGATTTGATGCGTTCCGTTCGTGA
GTTGGCCCAGATGGGACACTTCGACCCGGAAAACATGAATCCGGTGCCGCTGCCTGATCCTGAGAATGGAACCGTGGATA
TCGAGTATAACTTGGTTTCCAAGGCGAATGACCAGATCGAGTTCTCCGCAGGTTGGGGACAGACGGGTGTGATCGGTAAG
TTAAGTTTGAAGTTTACGAACTTCTCTATGAAGAACTTCTTAAACCCGAAAACCTATAAGGGCATCATCCCGCAAGGTGA
GGGACAGACATTGACCTTGAGCGGCCAGACGAATGGGCGTTACTATCAGGCTTACAGCATCTCCTTCATGGATCCTTGGT
TCGGCGGTAAACGACCGAATACATTGTCTGTCAGTGCTTATTTCTCAAAGCAAACCGATATCAGTAGCAATTACTTGACC
AATTCCGGTTATGGTTATGGCTATCCGGGCTATGGCTATGGTTATCCCGGTTATTATGGGGGCGGTTATGGCTATGGTAG
CAACTATTACGGCAACTATGGTTACAATAATAGTTATGAGTATGCTTACGACCCGGATAAGTCTATCATGATGTTCGGTT
TAGCGGCCGGTTATGGTAAACGTTTGAATTGGCCGGACGACTACTTCCAGTTCATGGCGACGTTGAACTATCAGTTGTAT
ATGATGCATGATTGGGACTATTTCTTGGTTAATAACGGAAATTGCCATAATATCAACTTGGAGTTGATGTTGCAACGTAA
CTCTATCGATAACCCGTTGTATACTCGTAAGGGTTCACAATTCATGTTGTCTGTAGCTGCTACGCCTCCTTACTCTTTAT
TCGATGGTAAGGATTATGCGTCGATGTCAAGCTCAGACCCGGATAAGTATAAATTCATCGAGTATCATAAATGGAAGTTC
AAAGCGAAGATCTTCTCTCCGTTGGCTCCGTTGACCGTGAAACGTACGCCGGTATTGATGACCCGTGTTGAGTATGGTTT
CTTGGGTACTTATAATAAAAATAAGAAGTCTCCGTTCGAGACCTTCTATATGGGTGGTGACGGTATGAGTGGTTACTCCA
GTACCTATGCTCAGGAAACGATCGGTTTGAGAGGTTATGAGAATGGTAGTATCGCCGGTAATGGTGGTTACAACTCTTAT
GGATACGCTTATTCTCGTTTGGCTATGGAGTTGAGATATCCGTTCTTGCTGGAGCCTTCCTCTACGATCTACGGATTGGT
ATTTGTGGAGGCTGGTAACGCTTGGACTGATTTGAAGAATTTTAATCCGTTTAACTTGAAACGCTCCGCCGGTGTCGGTG
TCCGTATATTCTTGCCGATGATCGGTTTGATGGGACTCGACTGGGCTTATGGTTTCGACGAGCCGAATTATGGATCTAAT
GGTAAACGTAGCGGTAGTAACCTGCACTTTATCATCGGACAGGAATTCTAA

Upstream 100 bases:

>100_bases
GAGAAGAAGAGTTGTATGAGGCTATATTGTATTACCAGCAACGTGAGCGTCGTTTCGGTAAGACAAGTGAGCAATTAATC
TTATAAACAATAGCTGTTAT

Downstream 100 bases:

>100_bases
AATATAGATCGGGTATAGCTTCGTATGTAGAGACGGGGCGTGTTCCGTATGTGGAGACGGGGCACGCCCCGTCTCTACAT
TTAAATAAATACTTTTAACG

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 896; Mature: 896

Protein sequence:

>896_residues
MYKRIVLFFICLGFACGAFAQEIDTTQVETPAEVPVISYSLAAKKYKIADIKITGIKNYDDFVLIGFSGLSVGDEITVPG
EEITTAVKRFWKHGLFSDVKILATKIEGDQIWLEIQLKQRPRISQVNYHGIKKGEREDLEAKLGLKKGFQVTPNVMDRAK
IVIQKFFDGKGFKNVDVEIEQKDDPANEGEVIVDINIDKNEKTKIHRIYFEGNEKLTARELKKAMKKTNEKFSLPNDWKT
SIMEMFSTKKFTTEEYENDKKNIIAKYNEHGYRDAVLLSDSVANFNEKKVDIFLKVDEGEKYYLKDIRFVGNTQYSTDYL
MAVLGMKPGEVYNQKKLNERLSTDEDAVSNVYFNNGYLFFNADPVEVDVANDSISLEIRIQEGPQATINRIIINGNDRLY
EDIVRRELRTKPGMLFSREDLMRSVRELAQMGHFDPENMNPVPLPDPENGTVDIEYNLVSKANDQIEFSAGWGQTGVIGK
LSLKFTNFSMKNFLNPKTYKGIIPQGEGQTLTLSGQTNGRYYQAYSISFMDPWFGGKRPNTLSVSAYFSKQTDISSNYLT
NSGYGYGYPGYGYGYPGYYGGGYGYGSNYYGNYGYNNSYEYAYDPDKSIMMFGLAAGYGKRLNWPDDYFQFMATLNYQLY
MMHDWDYFLVNNGNCHNINLELMLQRNSIDNPLYTRKGSQFMLSVAATPPYSLFDGKDYASMSSSDPDKYKFIEYHKWKF
KAKIFSPLAPLTVKRTPVLMTRVEYGFLGTYNKNKKSPFETFYMGGDGMSGYSSTYAQETIGLRGYENGSIAGNGGYNSY
GYAYSRLAMELRYPFLLEPSSTIYGLVFVEAGNAWTDLKNFNPFNLKRSAGVGVRIFLPMIGLMGLDWAYGFDEPNYGSN
GKRSGSNLHFIIGQEF

Sequences:

>Translated_896_residues
MYKRIVLFFICLGFACGAFAQEIDTTQVETPAEVPVISYSLAAKKYKIADIKITGIKNYDDFVLIGFSGLSVGDEITVPG
EEITTAVKRFWKHGLFSDVKILATKIEGDQIWLEIQLKQRPRISQVNYHGIKKGEREDLEAKLGLKKGFQVTPNVMDRAK
IVIQKFFDGKGFKNVDVEIEQKDDPANEGEVIVDINIDKNEKTKIHRIYFEGNEKLTARELKKAMKKTNEKFSLPNDWKT
SIMEMFSTKKFTTEEYENDKKNIIAKYNEHGYRDAVLLSDSVANFNEKKVDIFLKVDEGEKYYLKDIRFVGNTQYSTDYL
MAVLGMKPGEVYNQKKLNERLSTDEDAVSNVYFNNGYLFFNADPVEVDVANDSISLEIRIQEGPQATINRIIINGNDRLY
EDIVRRELRTKPGMLFSREDLMRSVRELAQMGHFDPENMNPVPLPDPENGTVDIEYNLVSKANDQIEFSAGWGQTGVIGK
LSLKFTNFSMKNFLNPKTYKGIIPQGEGQTLTLSGQTNGRYYQAYSISFMDPWFGGKRPNTLSVSAYFSKQTDISSNYLT
NSGYGYGYPGYGYGYPGYYGGGYGYGSNYYGNYGYNNSYEYAYDPDKSIMMFGLAAGYGKRLNWPDDYFQFMATLNYQLY
MMHDWDYFLVNNGNCHNINLELMLQRNSIDNPLYTRKGSQFMLSVAATPPYSLFDGKDYASMSSSDPDKYKFIEYHKWKF
KAKIFSPLAPLTVKRTPVLMTRVEYGFLGTYNKNKKSPFETFYMGGDGMSGYSSTYAQETIGLRGYENGSIAGNGGYNSY
GYAYSRLAMELRYPFLLEPSSTIYGLVFVEAGNAWTDLKNFNPFNLKRSAGVGVRIFLPMIGLMGLDWAYGFDEPNYGSN
GKRSGSNLHFIIGQEF
>Mature_896_residues
MYKRIVLFFICLGFACGAFAQEIDTTQVETPAEVPVISYSLAAKKYKIADIKITGIKNYDDFVLIGFSGLSVGDEITVPG
EEITTAVKRFWKHGLFSDVKILATKIEGDQIWLEIQLKQRPRISQVNYHGIKKGEREDLEAKLGLKKGFQVTPNVMDRAK
IVIQKFFDGKGFKNVDVEIEQKDDPANEGEVIVDINIDKNEKTKIHRIYFEGNEKLTARELKKAMKKTNEKFSLPNDWKT
SIMEMFSTKKFTTEEYENDKKNIIAKYNEHGYRDAVLLSDSVANFNEKKVDIFLKVDEGEKYYLKDIRFVGNTQYSTDYL
MAVLGMKPGEVYNQKKLNERLSTDEDAVSNVYFNNGYLFFNADPVEVDVANDSISLEIRIQEGPQATINRIIINGNDRLY
EDIVRRELRTKPGMLFSREDLMRSVRELAQMGHFDPENMNPVPLPDPENGTVDIEYNLVSKANDQIEFSAGWGQTGVIGK
LSLKFTNFSMKNFLNPKTYKGIIPQGEGQTLTLSGQTNGRYYQAYSISFMDPWFGGKRPNTLSVSAYFSKQTDISSNYLT
NSGYGYGYPGYGYGYPGYYGGGYGYGSNYYGNYGYNNSYEYAYDPDKSIMMFGLAAGYGKRLNWPDDYFQFMATLNYQLY
MMHDWDYFLVNNGNCHNINLELMLQRNSIDNPLYTRKGSQFMLSVAATPPYSLFDGKDYASMSSSDPDKYKFIEYHKWKF
KAKIFSPLAPLTVKRTPVLMTRVEYGFLGTYNKNKKSPFETFYMGGDGMSGYSSTYAQETIGLRGYENGSIAGNGGYNSY
GYAYSRLAMELRYPFLLEPSSTIYGLVFVEAGNAWTDLKNFNPFNLKRSAGVGVRIFLPMIGLMGLDWAYGFDEPNYGSN
GKRSGSNLHFIIGQEF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=505, Percent_Identity=21.980198019802, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 102000; Mature: 102000

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKRIVLFFICLGFACGAFAQEIDTTQVETPAEVPVISYSLAAKKYKIADIKITGIKNYD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCC
DFVLIGFSGLSVGDEITVPGEEITTAVKRFWKHGLFSDVKILATKIEGDQIWLEIQLKQR
CEEEEEECCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEECCC
PRISQVNYHGIKKGEREDLEAKLGLKKGFQVTPNVMDRAKIVIQKFFDGKGFKNVDVEIE
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEEE
QKDDPANEGEVIVDINIDKNEKTKIHRIYFEGNEKLTARELKKAMKKTNEKFSLPNDWKT
CCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEECHHHHHHHHHHCCCCCCCCCHHHH
SIMEMFSTKKFTTEEYENDKKNIIAKYNEHGYRDAVLLSDSVANFNEKKVDIFLKVDEGE
HHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEECCCC
KYYLKDIRFVGNTQYSTDYLMAVLGMKPGEVYNQKKLNERLSTDEDAVSNVYFNNGYLFF
EEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCEEEE
NADPVEVDVANDSISLEIRIQEGPQATINRIIINGNDRLYEDIVRRELRTKPGMLFSRED
CCCCEEEEECCCEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEECHHH
LMRSVRELAQMGHFDPENMNPVPLPDPENGTVDIEYNLVSKANDQIEFSAGWGQTGVIGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEE
LSLKFTNFSMKNFLNPKTYKGIIPQGEGQTLTLSGQTNGRYYQAYSISFMDPWFGGKRPN
EEEEEECEEHHHCCCCCCEECCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCC
TLSVSAYFSKQTDISSNYLTNSGYGYGYPGYGYGYPGYYGGGYGYGSNYYGNYGYNNSYE
EEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YAYDPDKSIMMFGLAAGYGKRLNWPDDYFQFMATLNYQLYMMHDWDYFLVNNGNCHNINL
EEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEECCCEEEEECCCEEEEEE
ELMLQRNSIDNPLYTRKGSQFMLSVAATPPYSLFDGKDYASMSSSDPDKYKFIEYHKWKF
EEEEECCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
KAKIFSPLAPLTVKRTPVLMTRVEYGFLGTYNKNKKSPFETFYMGGDGMSGYSSTYAQET
EEEECCCCCCCEECCCCEEEEEEEECEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
IGLRGYENGSIAGNGGYNSYGYAYSRLAMELRYPFLLEPSSTIYGLVFVEAGNAWTDLKN
CCCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCEEECCCCCEEEEEEEECCCCEECCCC
FNPFNLKRSAGVGVRIFLPMIGLMGLDWAYGFDEPNYGSNGKRSGSNLHFIIGQEF
CCCCCEECCCCCCEEEHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MYKRIVLFFICLGFACGAFAQEIDTTQVETPAEVPVISYSLAAKKYKIADIKITGIKNYD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCC
DFVLIGFSGLSVGDEITVPGEEITTAVKRFWKHGLFSDVKILATKIEGDQIWLEIQLKQR
CEEEEEECCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEEECCC
PRISQVNYHGIKKGEREDLEAKLGLKKGFQVTPNVMDRAKIVIQKFFDGKGFKNVDVEIE
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCEEEEEEE
QKDDPANEGEVIVDINIDKNEKTKIHRIYFEGNEKLTARELKKAMKKTNEKFSLPNDWKT
CCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEECHHHHHHHHHHCCCCCCCCCHHHH
SIMEMFSTKKFTTEEYENDKKNIIAKYNEHGYRDAVLLSDSVANFNEKKVDIFLKVDEGE
HHHHHHHCCCCCHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEECCCC
KYYLKDIRFVGNTQYSTDYLMAVLGMKPGEVYNQKKLNERLSTDEDAVSNVYFNNGYLFF
EEEEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHEEEEECCEEEE
NADPVEVDVANDSISLEIRIQEGPQATINRIIINGNDRLYEDIVRRELRTKPGMLFSRED
CCCCEEEEECCCEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEECHHH
LMRSVRELAQMGHFDPENMNPVPLPDPENGTVDIEYNLVSKANDQIEFSAGWGQTGVIGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEE
LSLKFTNFSMKNFLNPKTYKGIIPQGEGQTLTLSGQTNGRYYQAYSISFMDPWFGGKRPN
EEEEEECEEHHHCCCCCCEECCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCC
TLSVSAYFSKQTDISSNYLTNSGYGYGYPGYGYGYPGYYGGGYGYGSNYYGNYGYNNSYE
EEEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YAYDPDKSIMMFGLAAGYGKRLNWPDDYFQFMATLNYQLYMMHDWDYFLVNNGNCHNINL
EEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEEECCCEEEEECCCEEEEEE
ELMLQRNSIDNPLYTRKGSQFMLSVAATPPYSLFDGKDYASMSSSDPDKYKFIEYHKWKF
EEEEECCCCCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
KAKIFSPLAPLTVKRTPVLMTRVEYGFLGTYNKNKKSPFETFYMGGDGMSGYSSTYAQET
EEEECCCCCCCEECCCCEEEEEEEECEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHH
IGLRGYENGSIAGNGGYNSYGYAYSRLAMELRYPFLLEPSSTIYGLVFVEAGNAWTDLKN
CCCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCEEECCCCCEEEEEEEECCCCEECCCC
FNPFNLKRSAGVGVRIFLPMIGLMGLDWAYGFDEPNYGSNGKRSGSNLHFIIGQEF
CCCCCEECCCCCCEEEHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]