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The map label for this gene is ctpA [H]

Identifier: 150010231

GI number: 150010231

Start: 4465639

End: 4467345

Strand: Direct

Name: ctpA [H]

Synonym: BDI_3657

Alternate gene names: 150010231

Gene position: 4465639-4467345 (Clockwise)

Preceding gene: 150010230

Following gene: 150010236

Centisome position: 92.81

GC content: 47.8

Gene sequence:

>1707_bases
ATGTACAGATTGGTTCAACGAAGAGGAATTATAGGTTTATTTTGCTTGCTGTTCGTCGCAAGTAGCGTAGTGCCGGGATG
GGCGCAAAAAGATAACCGCTTTGAGGTGAGTAAGAACCTAGACATTTTCAATTCTTTATTGAAAGAAGTAGAGATGTTCT
ACGTGGATTCAGTGGATGTGGATAAAACCGTTCAGCGGGGAATCGAGGCAATGTTGGCTGGTTTAGATCCTTATACGGAA
TACTATCCTGAGCAAAAAACGGAGGAATTGAGTCTGATGACGACCGGCGAATACGGAGGTATCGGTTCCTTGATCCGTCA
GCGTAACAACGAGGGAGGCGTGATGATTGCCGAGCCTACCGAGGGAATGCCGGCCGATTTAGCGGGTCTGAAGCCGGGCG
ATCTGATCTTGGCGATCGATACGATCGATGTTTCCAAGGCGACAAACTCCCGGGTCAGCGAGTTGTTGAAAGGTGTTCCG
AATACGAAGATGGTTTTGACGATCCAACGTCCGGGCGAGAAGAAACCCCGGAAGTTCGAGATTACCCGTAAGCAGATCAC
GACACCTCAAGTTACTTACTACGGGGTTAAGAATGACAGTATCGGTTATATTTATCTAAAGGCATTTACTATCAAGAGTG
CTCAAGAGGTGAAAGAGGCGTTCTTGGACTTAAAGAAAAATCATAATATCAAGTCTTTGGTACTGGATTTGCGCGGTAAC
GGCGGCGGCGTGCTGGAAGGTGCCGTACAAATCGTAGGTATGTTCGTACCGAAAGGCAGCGAGGTGCTTTCAACGAAAGG
AAAGATCAAGCAATGGGATCGTACGTACCGAACCTCTACGGAGCCTTTGGATACGGTAATGCCGTTGGCTATATTGATCA
ATGGAGGTACGGCTTCCGCCGCTGAGATCGTATCGGGATCTTTGCAGGATATGGATCGTGCCGTGTTGGTGGGACAACGT
TCGTTTGGTAAGGGGTTGGTGCAAGCTCCTCGTGACCTGCCTTATAATGGAAAAGTGAAAATCACGATGAGTAAATACTA
TATCCCGAGTGGCCGTTGCATCCAGCAAATCGATTATTCGCACCGGAAAGAGGATGGTAGCGTGGCTGCTATTCCGGATA
GCTTGACTTCCGTATTCTATACGTCCAAGAAGCGTCCGGTTCGTGATGGTGGTGGCGTACGTCCGGAGTTTGAGGTGAAG
GAGCCGAAAGTGCCTACCATGATGTATTATTTGGCGGCGGATACGGTCTTGTTCGACTTCGTTACGGATTGGGCACAAAA
GCATAAGACAATCGCTCCTATCGAGGAATTTACGGTTTCCGATGAGGATTTCGAAGCTTTGAAGCAATACGCCAAGTCCA
AGAATTTCACGTATGACCGCCAAAGCGAGAAAGTATTGAGGAACTTAAAAGAAGTGGCTGAGTTCGAGGGGTATCTGGAG
GAGGATTCTACTGCGTTCAAGGAATTAGAGGCTAAGCTGACTCCGAATCTGGAAAAAGATTTCGATCGTTTCAAGGATGA
GGTGAAACGAGTAATGGCCGCCGAGATCGTAAAACGTTATTATTACCAACGAGGAGAGTTGCAAGAAAGCTTGAAAGATG
ATCTTGTATTGGAGAAAGCGTTGGAGGTATTGGGCGATCCGGATTTATACAGGCGTACATTGAGCGTGCCGGTTGAGTTG
GAAGCGGCCACCAAGGGTACCGAATAG

Upstream 100 bases:

>100_bases
GTATGATAAATGGGAACAAATAAAGTTAAAAGTAAAAGGGATATTGGCTTAAGCGGCATATTATTCCTTACATTTATGCC
ATTAATTAACTAAATATTGT

Downstream 100 bases:

>100_bases
GCGGGTTTCTGCCGATGCCCATTCAAAGGGCCTTACAATGCCCATTCAAGCGAGCTTACGATGCCCATTGTCAGCTCCCT
TGAATGGGCATCGTGCTTTT

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MYRLVQRRGIIGLFCLLFVASSVVPGWAQKDNRFEVSKNLDIFNSLLKEVEMFYVDSVDVDKTVQRGIEAMLAGLDPYTE
YYPEQKTEELSLMTTGEYGGIGSLIRQRNNEGGVMIAEPTEGMPADLAGLKPGDLILAIDTIDVSKATNSRVSELLKGVP
NTKMVLTIQRPGEKKPRKFEITRKQITTPQVTYYGVKNDSIGYIYLKAFTIKSAQEVKEAFLDLKKNHNIKSLVLDLRGN
GGGVLEGAVQIVGMFVPKGSEVLSTKGKIKQWDRTYRTSTEPLDTVMPLAILINGGTASAAEIVSGSLQDMDRAVLVGQR
SFGKGLVQAPRDLPYNGKVKITMSKYYIPSGRCIQQIDYSHRKEDGSVAAIPDSLTSVFYTSKKRPVRDGGGVRPEFEVK
EPKVPTMMYYLAADTVLFDFVTDWAQKHKTIAPIEEFTVSDEDFEALKQYAKSKNFTYDRQSEKVLRNLKEVAEFEGYLE
EDSTAFKELEAKLTPNLEKDFDRFKDEVKRVMAAEIVKRYYYQRGELQESLKDDLVLEKALEVLGDPDLYRRTLSVPVEL
EAATKGTE

Sequences:

>Translated_568_residues
MYRLVQRRGIIGLFCLLFVASSVVPGWAQKDNRFEVSKNLDIFNSLLKEVEMFYVDSVDVDKTVQRGIEAMLAGLDPYTE
YYPEQKTEELSLMTTGEYGGIGSLIRQRNNEGGVMIAEPTEGMPADLAGLKPGDLILAIDTIDVSKATNSRVSELLKGVP
NTKMVLTIQRPGEKKPRKFEITRKQITTPQVTYYGVKNDSIGYIYLKAFTIKSAQEVKEAFLDLKKNHNIKSLVLDLRGN
GGGVLEGAVQIVGMFVPKGSEVLSTKGKIKQWDRTYRTSTEPLDTVMPLAILINGGTASAAEIVSGSLQDMDRAVLVGQR
SFGKGLVQAPRDLPYNGKVKITMSKYYIPSGRCIQQIDYSHRKEDGSVAAIPDSLTSVFYTSKKRPVRDGGGVRPEFEVK
EPKVPTMMYYLAADTVLFDFVTDWAQKHKTIAPIEEFTVSDEDFEALKQYAKSKNFTYDRQSEKVLRNLKEVAEFEGYLE
EDSTAFKELEAKLTPNLEKDFDRFKDEVKRVMAAEIVKRYYYQRGELQESLKDDLVLEKALEVLGDPDLYRRTLSVPVEL
EAATKGTE
>Mature_568_residues
MYRLVQRRGIIGLFCLLFVASSVVPGWAQKDNRFEVSKNLDIFNSLLKEVEMFYVDSVDVDKTVQRGIEAMLAGLDPYTE
YYPEQKTEELSLMTTGEYGGIGSLIRQRNNEGGVMIAEPTEGMPADLAGLKPGDLILAIDTIDVSKATNSRVSELLKGVP
NTKMVLTIQRPGEKKPRKFEITRKQITTPQVTYYGVKNDSIGYIYLKAFTIKSAQEVKEAFLDLKKNHNIKSLVLDLRGN
GGGVLEGAVQIVGMFVPKGSEVLSTKGKIKQWDRTYRTSTEPLDTVMPLAILINGGTASAAEIVSGSLQDMDRAVLVGQR
SFGKGLVQAPRDLPYNGKVKITMSKYYIPSGRCIQQIDYSHRKEDGSVAAIPDSLTSVFYTSKKRPVRDGGGVRPEFEVK
EPKVPTMMYYLAADTVLFDFVTDWAQKHKTIAPIEEFTVSDEDFEALKQYAKSKNFTYDRQSEKVLRNLKEVAEFEGYLE
EDSTAFKELEAKLTPNLEKDFDRFKDEVKRVMAAEIVKRYYYQRGELQESLKDDLVLEKALEVLGDPDLYRRTLSVPVEL
EAATKGTE

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=319, Percent_Identity=28.2131661442006, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 63771; Mature: 63771

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRLVQRRGIIGLFCLLFVASSVVPGWAQKDNRFEVSKNLDIFNSLLKEVEMFYVDSVDV
CCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCH
DKTVQRGIEAMLAGLDPYTEYYPEQKTEELSLMTTGEYGGIGSLIRQRNNEGGVMIAEPT
HHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEECCC
EGMPADLAGLKPGDLILAIDTIDVSKATNSRVSELLKGVPNTKMVLTIQRPGEKKPRKFE
CCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEE
ITRKQITTPQVTYYGVKNDSIGYIYLKAFTIKSAQEVKEAFLDLKKNHNIKSLVLDLRGN
EHHHHCCCCCEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCC
GGGVLEGAVQIVGMFVPKGSEVLSTKGKIKQWDRTYRTSTEPLDTVMPLAILINGGTASA
CCCHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCHHHHCEEEEEEECCCCHH
AEIVSGSLQDMDRAVLVGQRSFGKGLVQAPRDLPYNGKVKITMSKYYIPSGRCIQQIDYS
HHHHCCCHHHHHHHHEECCHHHCCHHHCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHH
HRKEDGSVAAIPDSLTSVFYTSKKRPVRDGGGVRPEFEVKEPKVPTMMYYLAADTVLFDF
HCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VTDWAQKHKTIAPIEEFTVSDEDFEALKQYAKSKNFTYDRQSEKVLRNLKEVAEFEGYLE
HHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
EDSTAFKELEAKLTPNLEKDFDRFKDEVKRVMAAEIVKRYYYQRGELQESLKDDLVLEKA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEVLGDPDLYRRTLSVPVELEAATKGTE
HHHHCCCHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure
MYRLVQRRGIIGLFCLLFVASSVVPGWAQKDNRFEVSKNLDIFNSLLKEVEMFYVDSVDV
CCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCH
DKTVQRGIEAMLAGLDPYTEYYPEQKTEELSLMTTGEYGGIGSLIRQRNNEGGVMIAEPT
HHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCEEEECCC
EGMPADLAGLKPGDLILAIDTIDVSKATNSRVSELLKGVPNTKMVLTIQRPGEKKPRKFE
CCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEE
ITRKQITTPQVTYYGVKNDSIGYIYLKAFTIKSAQEVKEAFLDLKKNHNIKSLVLDLRGN
EHHHHCCCCCEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCC
GGGVLEGAVQIVGMFVPKGSEVLSTKGKIKQWDRTYRTSTEPLDTVMPLAILINGGTASA
CCCHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCCHHHHCEEEEEEECCCCHH
AEIVSGSLQDMDRAVLVGQRSFGKGLVQAPRDLPYNGKVKITMSKYYIPSGRCIQQIDYS
HHHHCCCHHHHHHHHEECCHHHCCHHHCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHH
HRKEDGSVAAIPDSLTSVFYTSKKRPVRDGGGVRPEFEVKEPKVPTMMYYLAADTVLFDF
HCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VTDWAQKHKTIAPIEEFTVSDEDFEALKQYAKSKNFTYDRQSEKVLRNLKEVAEFEGYLE
HHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
EDSTAFKELEAKLTPNLEKDFDRFKDEVKRVMAAEIVKRYYYQRGELQESLKDDLVLEKA
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEVLGDPDLYRRTLSVPVELEAATKGTE
HHHHCCCHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]