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The map label for this gene is 150010220

Identifier: 150010220

GI number: 150010220

Start: 4451635

End: 4452045

Strand: Direct

Name: 150010220

Synonym: BDI_3643

Alternate gene names: NA

Gene position: 4451635-4452045 (Clockwise)

Preceding gene: 150010219

Following gene: 150010221

Centisome position: 92.52

GC content: 32.12

Gene sequence:

>411_bases
ATGAGGCGTTATCTTTTAGATACCAACATATGTATCTTCTATATGAAAGGGAAATTTCATTTAAATGAGAAGATTGATGA
TAAAATGAAGCGATATTGCTTTATTTCTGAAATTACTATTGCCGAACTTCTATATGGAGCTACTTGCTCAAATCGAAAGG
ATAAAATGTTGAAAGAGGTAGAATCTTTTATCTCGCAGTTTACAGTTTTACCAATTTACGGTTCTTTGCTTATGTTCGCT
GAACTAAAAAGCACATTGCGATCTCAAGGACTTTTAATAGATGATTTTGATTTGTTGATTGGAGCTTCTGCCGTAGCAAA
TGATTTGATTTTAGTTACAGAAAATGTAAAGCACCTAGAACGTATTCCTCATCTTAAAATAGAGAATTGGATTGATAGAG
CGAAGATTTAA

Upstream 100 bases:

>100_bases
CGTTTGGCGCTTGGGATGATGACAAAAGTGCAGAAGAGATTATTGCTGAAATTAATAAAGCACGTGTTTTGGGAACGCGA
TCTATTGAATCTTTTGACGA

Downstream 100 bases:

>100_bases
TTGATAATCTATTCATTTAATTAAAGTTACTTCATGATAGGAAAGATATAATGGAGCAAGTAGCTATTGCCGCTCGAGAA
AGTTCACTTAGAGCGGAGAT

Product: putative DNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRRYLLDTNICIFYMKGKFHLNEKIDDKMKRYCFISEITIAELLYGATCSNRKDKMLKEVESFISQFTVLPIYGSLLMFA
ELKSTLRSQGLLIDDFDLLIGASAVANDLILVTENVKHLERIPHLKIENWIDRAKI

Sequences:

>Translated_136_residues
MRRYLLDTNICIFYMKGKFHLNEKIDDKMKRYCFISEITIAELLYGATCSNRKDKMLKEVESFISQFTVLPIYGSLLMFA
ELKSTLRSQGLLIDDFDLLIGASAVANDLILVTENVKHLERIPHLKIENWIDRAKI
>Mature_136_residues
MRRYLLDTNICIFYMKGKFHLNEKIDDKMKRYCFISEITIAELLYGATCSNRKDKMLKEVESFISQFTVLPIYGSLLMFA
ELKSTLRSQGLLIDDFDLLIGASAVANDLILVTENVKHLERIPHLKIENWIDRAKI

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15821; Mature: 15821

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRYLLDTNICIFYMKGKFHLNEKIDDKMKRYCFISEITIAELLYGATCSNRKDKMLKEV
CCCEEEECCEEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ESFISQFTVLPIYGSLLMFAELKSTLRSQGLLIDDFDLLIGASAVANDLILVTENVKHLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCEEEEECCHHHHH
RIPHLKIENWIDRAKI
HCCCCCHHHHHHHCCC
>Mature Secondary Structure
MRRYLLDTNICIFYMKGKFHLNEKIDDKMKRYCFISEITIAELLYGATCSNRKDKMLKEV
CCCEEEECCEEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ESFISQFTVLPIYGSLLMFAELKSTLRSQGLLIDDFDLLIGASAVANDLILVTENVKHLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHCCEEEEECCHHHHH
RIPHLKIENWIDRAKI
HCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]