| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is eryC1 [H]
Identifier: 150010197
GI number: 150010197
Start: 4431988
End: 4433091
Strand: Direct
Name: eryC1 [H]
Synonym: BDI_3620
Alternate gene names: 150010197
Gene position: 4431988-4433091 (Clockwise)
Preceding gene: 150010196
Following gene: 150010198
Centisome position: 92.11
GC content: 40.31
Gene sequence:
>1104_bases ATGATTCCATTTCTTTCATTAAAAGATTTGACTGCTCTTCACGCAGAGGAGATTCACGAAGTTGTGTGTCGTGTGGTTGA TAGCGGTTGGTATTTACAAGGTAAGGAAAATGATACTTTCGAGACTAACTATGCCAAATATATAGGAACAGGGTATTGTA TTGGTTGTGCAAATGGTCTTGACGCACTTATATGGATATTCCGAGCGTACATTGAATTGGGCGTGATGAAACCTGGTGAT GAGGTGATTGTTCCTGCTAATACCTATATAGCTACGATTTTGGCAATAACAGAAAATGGTTTGAAGCCGATTTTAGTAGA GCCGAAACTCAATACGCTTGAGATTGATGAAGACTTGATAGAAGAGGTCATTACGCCTAGAACGAAAGCTATTGCCATTG TCCATTTGTATGGACGTATAGCTTATACGGAGAAAATCGGAACGTTATGCAAAAAGTACGATCTGAAATTGGTGGAGGAT TGTGCACAAAGTCATGGTTGTTTCTATCAAGATGGACGTATGACTGGCAACTTGGGGGATGCGGCAGGCCATAGCTTTTA TCCGGGTAAGAATTTAGGGGCATTGGGTGATGGCGGTGCGGTGACGACGAATGATAAGGAATTAGCTGTAGCCATCCGAG CGTTGGCCAATTATGGAAGCCAAAAGAAATACGTATTTAAATATACGGGACGTAATAGTCGTTTGGATGAAATCCAAGCA GCCGTGTTGGACGTGAAGCTAAAATATTTAAAGGAAGACAACGCCCACAGAAAGATGATCGGAAAATATTATATAGATCA TATAAACAATCCGCATATCAATTTTCCGGATACGCTTCCTGAAGAGCAAAATGTATTTCATCTTTTTCCGGTATTTTGCG AAAGGCGGGATGAGCTCCAAGCTTATTTAACCAAGAATGGAGTAGGTACGGTTATACATTATCCGATTCCTCCTCATAAA CAGGAGTGTTATAAGCAATGGAATGAACTAGCATTCCCGATAACAGAACAAATAGCCTCACAAGAATTGAGCTTGCCTAT AAGTCCTGTATTGACAATAGAGGAGGCAACTTATGTGGTAAATGTATTGAATAAATGGGAATAG
Upstream 100 bases:
>100_bases TATTTTTAAGGATATTAAAATAGGAGCTCATTATGCAAAAAGATATGAAACGTATGAGATAAAATAATGAATCATAAGAA CAACTTAAAGTATAAATAAT
Downstream 100 bases:
>100_bases TTCATAAAATTCTCTCTTTCAGCCAACGGACATTAAAGGCGGACATCGTAAAAGTCTTTTCCTTTACAGCCATGTCTACC GTGGTAAAGATGCTTACGGG
Product: putative aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MIPFLSLKDLTALHAEEIHEVVCRVVDSGWYLQGKENDTFETNYAKYIGTGYCIGCANGLDALIWIFRAYIELGVMKPGD EVIVPANTYIATILAITENGLKPILVEPKLNTLEIDEDLIEEVITPRTKAIAIVHLYGRIAYTEKIGTLCKKYDLKLVED CAQSHGCFYQDGRMTGNLGDAAGHSFYPGKNLGALGDGGAVTTNDKELAVAIRALANYGSQKKYVFKYTGRNSRLDEIQA AVLDVKLKYLKEDNAHRKMIGKYYIDHINNPHINFPDTLPEEQNVFHLFPVFCERRDELQAYLTKNGVGTVIHYPIPPHK QECYKQWNELAFPITEQIASQELSLPISPVLTIEEATYVVNVLNKWE
Sequences:
>Translated_367_residues MIPFLSLKDLTALHAEEIHEVVCRVVDSGWYLQGKENDTFETNYAKYIGTGYCIGCANGLDALIWIFRAYIELGVMKPGD EVIVPANTYIATILAITENGLKPILVEPKLNTLEIDEDLIEEVITPRTKAIAIVHLYGRIAYTEKIGTLCKKYDLKLVED CAQSHGCFYQDGRMTGNLGDAAGHSFYPGKNLGALGDGGAVTTNDKELAVAIRALANYGSQKKYVFKYTGRNSRLDEIQA AVLDVKLKYLKEDNAHRKMIGKYYIDHINNPHINFPDTLPEEQNVFHLFPVFCERRDELQAYLTKNGVGTVIHYPIPPHK QECYKQWNELAFPITEQIASQELSLPISPVLTIEEATYVVNVLNKWE >Mature_367_residues MIPFLSLKDLTALHAEEIHEVVCRVVDSGWYLQGKENDTFETNYAKYIGTGYCIGCANGLDALIWIFRAYIELGVMKPGD EVIVPANTYIATILAITENGLKPILVEPKLNTLEIDEDLIEEVITPRTKAIAIVHLYGRIAYTEKIGTLCKKYDLKLVED CAQSHGCFYQDGRMTGNLGDAAGHSFYPGKNLGALGDGGAVTTNDKELAVAIRALANYGSQKKYVFKYTGRNSRLDEIQA AVLDVKLKYLKEDNAHRKMIGKYYIDHINNPHINFPDTLPEEQNVFHLFPVFCERRDELQAYLTKNGVGTVIHYPIPPHK QECYKQWNELAFPITEQIASQELSLPISPVLTIEEATYVVNVLNKWE
Specific function: Sensor protein that transfers the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of erythromycin biosynthesis genes (Potential) [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=377, Percent_Identity=29.4429708222812, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI2367285, Length=310, Percent_Identity=30.9677419354839, Blast_Score=114, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 41306; Mature: 41306
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFLSLKDLTALHAEEIHEVVCRVVDSGWYLQGKENDTFETNYAKYIGTGYCIGCANGL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCEEEEECCCHH DALIWIFRAYIELGVMKPGDEVIVPANTYIATILAITENGLKPILVEPKLNTLEIDEDLI HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHEEHHCCCCCEEEECCCCCEEECCHHHH EEVITPRTKAIAIVHLYGRIAYTEKIGTLCKKYDLKLVEDCAQSHGCFYQDGRMTGNLGD HHHHCCCCHHEEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCEECCCCC AAGHSFYPGKNLGALGDGGAVTTNDKELAVAIRALANYGSQKKYVFKYTGRNSRLDEIQA CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH AVLDVKLKYLKEDNAHRKMIGKYYIDHINNPHINFPDTLPEEQNVFHLFPVFCERRDELQ HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCHHHHH AYLTKNGVGTVIHYPIPPHKQECYKQWNELAFPITEQIASQELSLPISPVLTIEEATYVV HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEHHHHHHH NVLNKWE HHHHCCC >Mature Secondary Structure MIPFLSLKDLTALHAEEIHEVVCRVVDSGWYLQGKENDTFETNYAKYIGTGYCIGCANGL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHCCCEEEEECCCHH DALIWIFRAYIELGVMKPGDEVIVPANTYIATILAITENGLKPILVEPKLNTLEIDEDLI HHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHEEHHCCCCCEEEECCCCCEEECCHHHH EEVITPRTKAIAIVHLYGRIAYTEKIGTLCKKYDLKLVEDCAQSHGCFYQDGRMTGNLGD HHHHCCCCHHEEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEECCCEECCCCC AAGHSFYPGKNLGALGDGGAVTTNDKELAVAIRALANYGSQKKYVFKYTGRNSRLDEIQA CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH AVLDVKLKYLKEDNAHRKMIGKYYIDHINNPHINFPDTLPEEQNVFHLFPVFCERRDELQ HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHCCHHHHH AYLTKNGVGTVIHYPIPPHKQECYKQWNELAFPITEQIASQELSLPISPVLTIEEATYVV HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEHHHHHHH NVLNKWE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2575703 [H]