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The map label for this gene is ycjS [C]

Identifier: 150010139

GI number: 150010139

Start: 4354506

End: 4355660

Strand: Direct

Name: ycjS [C]

Synonym: BDI_3562

Alternate gene names: 150010139

Gene position: 4354506-4355660 (Clockwise)

Preceding gene: 150010137

Following gene: 150010140

Centisome position: 90.5

GC content: 49.52

Gene sequence:

>1155_bases
ATGAAACGAAAAATCAGAATGGGAATGGTCGGTGGAGGACAAGGCTCGTTTATCGGGGCCGTTCATCGTATCGCCGCTAA
TTTAGACGGACAGATCGAGTTGGTCTGTGGATGCTTCAGTTCTCGCCCGGAGAATTCATTGGCTACCGGACAATCTTTAT
TTTTACCGGATAATCGTATTTACGCATCTTATCAGGAAATGATAGAGAAAGAGGCCACCCTGCCTGAAGGCGAACGGATG
GATTTTGTGTCTATCGTTACCCCGAATCATGTGCATTTCGGTCCGGCCATGATGGCGTTGGAACATGGTTTCCATGTCGT
ACTGGATAAACCGATGACATATACCTTGGATGAGGCGAAGCAATTACGAGACAAAGTGAAGGAAACCGGAAAATTGTTTA
TGCTGACTCATACCTATACCGCTTACCCGATGGTGAAGGAGGCTCGGGAAAGGGTACGCAGGGGCGATTTAGGTAAGATA
CGCCGTATTTATGTGGAATATCCTCAAGGCTGGCTATATAATGACTGCGCTGATGTTAATAAGCAGGCGGCTTGGCGGGT
GGATCCCAATCGGTCGGGTAAGGCCGGTTGCATGGGGGATATCGGGACTCATGCGTTTAATCTGGCGGAATATATAACAG
GGCTGAAGGCCGTGGAATTATGCGGTGAATTGAATACCTTCGTGCCGGATCGTCTTTTGGATGATGATGGGGCGGCATTG
ATCCGTTATGAGGGAGGCGCGAAAGGGGTGCTGACCGCTAGTCAGATCGCCGTAGGTGTAGAGAATGGCTTGAATATTCG
TGTGTATGGAGAGAAAGGTGGGTTGGAATGGCGTCAAGAAGAACCGAATACGATGATTATGCGTTGGCCGGATCGTCCGG
CGGAGATCATCCGTACTTCCAATGGATATATGTCGGGTATCGCCGCTCATAATTCCCGTACGCCGGGCGGGCATCCGGAA
GGCTATATAGAGGCATTCGCTAATTTGTATCGGAATTTCGCCTTGGCTTTGCGATCGATTCTGGCTGGTGAGGAACCGGC
TCCTGAAACCTTGGATTTCCCTTCCGCCGAAGACGGTGTCCGTGGCATGCGGTTTATCGAGACGATTGTAGCTACCGGAT
CGACAGAGAATAAATGGATAAAAATAATCGACTAA

Upstream 100 bases:

>100_bases
AAAAATATTAAGCTGTTAAATTGGCGTACGCAGGGTTATTTTTCATAGCTTTGTGAATCAACAATGTAATTACCTTAGTT
TAATAAAACGGAATAATACC

Downstream 100 bases:

>100_bases
AAATAATACTATATATGGCACGTCCTGTAACATTATATACCCTCCAGTGGGGAGATTTATCACTGGAAACAGTTTGTCAA
AAAGCGAAAGAATTCGGATA

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKRKIRMGMVGGGQGSFIGAVHRIAANLDGQIELVCGCFSSRPENSLATGQSLFLPDNRIYASYQEMIEKEATLPEGERM
DFVSIVTPNHVHFGPAMMALEHGFHVVLDKPMTYTLDEAKQLRDKVKETGKLFMLTHTYTAYPMVKEARERVRRGDLGKI
RRIYVEYPQGWLYNDCADVNKQAAWRVDPNRSGKAGCMGDIGTHAFNLAEYITGLKAVELCGELNTFVPDRLLDDDGAAL
IRYEGGAKGVLTASQIAVGVENGLNIRVYGEKGGLEWRQEEPNTMIMRWPDRPAEIIRTSNGYMSGIAAHNSRTPGGHPE
GYIEAFANLYRNFALALRSILAGEEPAPETLDFPSAEDGVRGMRFIETIVATGSTENKWIKIID

Sequences:

>Translated_384_residues
MKRKIRMGMVGGGQGSFIGAVHRIAANLDGQIELVCGCFSSRPENSLATGQSLFLPDNRIYASYQEMIEKEATLPEGERM
DFVSIVTPNHVHFGPAMMALEHGFHVVLDKPMTYTLDEAKQLRDKVKETGKLFMLTHTYTAYPMVKEARERVRRGDLGKI
RRIYVEYPQGWLYNDCADVNKQAAWRVDPNRSGKAGCMGDIGTHAFNLAEYITGLKAVELCGELNTFVPDRLLDDDGAAL
IRYEGGAKGVLTASQIAVGVENGLNIRVYGEKGGLEWRQEEPNTMIMRWPDRPAEIIRTSNGYMSGIAAHNSRTPGGHPE
GYIEAFANLYRNFALALRSILAGEEPAPETLDFPSAEDGVRGMRFIETIVATGSTENKWIKIID
>Mature_384_residues
MKRKIRMGMVGGGQGSFIGAVHRIAANLDGQIELVCGCFSSRPENSLATGQSLFLPDNRIYASYQEMIEKEATLPEGERM
DFVSIVTPNHVHFGPAMMALEHGFHVVLDKPMTYTLDEAKQLRDKVKETGKLFMLTHTYTAYPMVKEARERVRRGDLGKI
RRIYVEYPQGWLYNDCADVNKQAAWRVDPNRSGKAGCMGDIGTHAFNLAEYITGLKAVELCGELNTFVPDRLLDDDGAAL
IRYEGGAKGVLTASQIAVGVENGLNIRVYGEKGGLEWRQEEPNTMIMRWPDRPAEIIRTSNGYMSGIAAHNSRTPGGHPE
GYIEAFANLYRNFALALRSILAGEEPAPETLDFPSAEDGVRGMRFIETIVATGSTENKWIKIID

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=287, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42610; Mature: 42610

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKIRMGMVGGGQGSFIGAVHRIAANLDGQIELVCGCFSSRPENSLATGQSLFLPDNRI
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCHH
YASYQEMIEKEATLPEGERMDFVSIVTPNHVHFGPAMMALEHGFHVVLDKPMTYTLDEAK
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCEECCHHHHHHHCCCEEEECCCCEEEHHHHH
QLRDKVKETGKLFMLTHTYTAYPMVKEARERVRRGDLGKIRRIYVEYPQGWLYNDCADVN
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHCC
KQAAWRVDPNRSGKAGCMGDIGTHAFNLAEYITGLKAVELCGELNTFVPDRLLDDDGAAL
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEE
IRYEGGAKGVLTASQIAVGVENGLNIRVYGEKGGLEWRQEEPNTMIMRWPDRPAEIIRTS
EEECCCCCCEEEHHHEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHEECC
NGYMSGIAAHNSRTPGGHPEGYIEAFANLYRNFALALRSILAGEEPAPETLDFPSAEDGV
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
RGMRFIETIVATGSTENKWIKIID
HHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MKRKIRMGMVGGGQGSFIGAVHRIAANLDGQIELVCGCFSSRPENSLATGQSLFLPDNRI
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCHH
YASYQEMIEKEATLPEGERMDFVSIVTPNHVHFGPAMMALEHGFHVVLDKPMTYTLDEAK
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCEECCHHHHHHHCCCEEEECCCCEEEHHHHH
QLRDKVKETGKLFMLTHTYTAYPMVKEARERVRRGDLGKIRRIYVEYPQGWLYNDCADVN
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHCC
KQAAWRVDPNRSGKAGCMGDIGTHAFNLAEYITGLKAVELCGELNTFVPDRLLDDDGAAL
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEE
IRYEGGAKGVLTASQIAVGVENGLNIRVYGEKGGLEWRQEEPNTMIMRWPDRPAEIIRTS
EEECCCCCCEEEHHHEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHEECC
NGYMSGIAAHNSRTPGGHPEGYIEAFANLYRNFALALRSILAGEEPAPETLDFPSAEDGV
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
RGMRFIETIVATGSTENKWIKIID
HHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]