| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010093
Identifier: 150010093
GI number: 150010093
Start: 4298902
End: 4300488
Strand: Direct
Name: 150010093
Synonym: BDI_3513
Alternate gene names: NA
Gene position: 4298902-4300488 (Clockwise)
Preceding gene: 150010092
Following gene: 150010095
Centisome position: 89.35
GC content: 46.19
Gene sequence:
>1587_bases ATGAATTACGGGCGGATAATAACCATGTTGGAAGAACAGTTGCGCTTTTCTAAAACTCAGAACGCGCAACTCATCGAACA AAACGCAAGACAGGCAGAACTGATCAGCCGGATGGCTTCTCAGATCGAGACATTGACCGCGTCCGTTCATTCACTCGAAC AGGCTTTACTATCCAGGGACGCTTCCCTGGAACAGGCATTGGTTACTAAACGTGCGTTAGGAAAATTAATAAGCAATAAA TCAGAAAAGATTGTTACAGCTCCACCTCCCTGTTCGCCATCAGATGAGACACCCCCAAAAAAAGTAGCCCCCTCCGCCAA GGAGCGTGGTAACAATAACGCCAAGCGCAAGGAGCATTTTGACTTGGAGGTGCGGGAACACGACATTTATCCTTCACGGT CCGGTTTCCAGCCTGAGCTTGGCAAGTTCCTGAAAACCGTAGACTCCATCCGCTATGAGCTCGTTCCTCCCCGTTTTATC AAACATATCCATCACCTGCATTATTATCGATACCGGGGAAATATCATATATGGCAATCTTCCTGCCACGCCCCTGCTCAA TTCCTCTTATGACGCCTCCTTTATTGCCGGCATACTACAACTGCGTTATATCTACTCCATGCCGGTGGAAAGGATTATCA AGTTTTTCGGTGAAAGCGGTTTTGATATAAACAAATCCACCGCGCACGGACTGATAAAAAAAACAGCGTGGTTGTTCGAC TCTCTGGAGCAGGCCCTGGGGGAGGCGGTCCGTCAGGATGAATATCTGCATATGGACGAGAGCTATTACACGGTATTGGA AAAGGGAAGCAAGTCCTCTACGGGGAAAGCCTCTCGCAAGGTCTATATCTGGGCGGCCCTGGCCAGTCATCTGAGGCTGG TCCACTTCTTCAATGAGAATGGTTCCCGTGCCAGAAAGGTCTTAACCCAATATATAAAACCGGATTATCGGGGAGCCATT CAAACGGATGGTCTGGGAGATTATAAAATACTGGAGACGGACGAATATCCACACGCCGTGCGTCTGGCATGCTTTCAGCA TTGTAAACGAAAGTTCCTTGACATTAAAGAAAACAAGGATGCCCGAGAAGTCATAGAAATCATCAATAAGCTCTATCAAA AGGAACACGAGATGCCCGCGGGATACTCACCGCGGCAGATAATGAAATACAAAAAGAAGCACGCCTCTCCTATATTAAAT GAATTAAAGCGGAAACTGCTGGCCATACAAGCGGAGAAGTCGACCTTGCCTAAAAGCTCTTTGGGGAAAGCGGTGAATTA TGCCCTCAAGGAATATCCCGCGTTGTCGAATTATATACTTGCGCCGGAATACGAGCTGGACAACAATGCGATTGAGAGAA TAAACCGGTACATCAGTTTGAGTAGAAGAAACTCACTCTTCTGTGGAAGTCATCAGGGCGTAAAGAGAGCCGCACTGATA TATTCACTGGCATGCTCATGCAGGATGAACAATATCAATACTTTTGAATACTTTAAAGAATTACTCAACAAGGCTGTCTC ACTGAATCCGAATACCGATAAAAATGTGTTGAGAGAATTACTGCCCGACAAATGGAAAAAAAGATAG
Upstream 100 bases:
>100_bases CGCTTTAAAATATAGCGATTGTAATTGTACGCTATTGACGTACAGATATTTAATCGCTATATTTTTTGGATAAACGCGTT ATTATTCATACCTTTACCCC
Downstream 100 bases:
>100_bases CAACGCGGAGACGCTTACCGTTTCCCATTAAAACATGGTAGATGCAGAATGAAAATTGTAGATGTTATTCCATCTGCAAC CACTATATAACATATTTATT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MNYGRIITMLEEQLRFSKTQNAQLIEQNARQAELISRMASQIETLTASVHSLEQALLSRDASLEQALVTKRALGKLISNK SEKIVTAPPPCSPSDETPPKKVAPSAKERGNNNAKRKEHFDLEVREHDIYPSRSGFQPELGKFLKTVDSIRYELVPPRFI KHIHHLHYYRYRGNIIYGNLPATPLLNSSYDASFIAGILQLRYIYSMPVERIIKFFGESGFDINKSTAHGLIKKTAWLFD SLEQALGEAVRQDEYLHMDESYYTVLEKGSKSSTGKASRKVYIWAALASHLRLVHFFNENGSRARKVLTQYIKPDYRGAI QTDGLGDYKILETDEYPHAVRLACFQHCKRKFLDIKENKDAREVIEIINKLYQKEHEMPAGYSPRQIMKYKKKHASPILN ELKRKLLAIQAEKSTLPKSSLGKAVNYALKEYPALSNYILAPEYELDNNAIERINRYISLSRRNSLFCGSHQGVKRAALI YSLACSCRMNNINTFEYFKELLNKAVSLNPNTDKNVLRELLPDKWKKR
Sequences:
>Translated_528_residues MNYGRIITMLEEQLRFSKTQNAQLIEQNARQAELISRMASQIETLTASVHSLEQALLSRDASLEQALVTKRALGKLISNK SEKIVTAPPPCSPSDETPPKKVAPSAKERGNNNAKRKEHFDLEVREHDIYPSRSGFQPELGKFLKTVDSIRYELVPPRFI KHIHHLHYYRYRGNIIYGNLPATPLLNSSYDASFIAGILQLRYIYSMPVERIIKFFGESGFDINKSTAHGLIKKTAWLFD SLEQALGEAVRQDEYLHMDESYYTVLEKGSKSSTGKASRKVYIWAALASHLRLVHFFNENGSRARKVLTQYIKPDYRGAI QTDGLGDYKILETDEYPHAVRLACFQHCKRKFLDIKENKDAREVIEIINKLYQKEHEMPAGYSPRQIMKYKKKHASPILN ELKRKLLAIQAEKSTLPKSSLGKAVNYALKEYPALSNYILAPEYELDNNAIERINRYISLSRRNSLFCGSHQGVKRAALI YSLACSCRMNNINTFEYFKELLNKAVSLNPNTDKNVLRELLPDKWKKR >Mature_528_residues MNYGRIITMLEEQLRFSKTQNAQLIEQNARQAELISRMASQIETLTASVHSLEQALLSRDASLEQALVTKRALGKLISNK SEKIVTAPPPCSPSDETPPKKVAPSAKERGNNNAKRKEHFDLEVREHDIYPSRSGFQPELGKFLKTVDSIRYELVPPRFI KHIHHLHYYRYRGNIIYGNLPATPLLNSSYDASFIAGILQLRYIYSMPVERIIKFFGESGFDINKSTAHGLIKKTAWLFD SLEQALGEAVRQDEYLHMDESYYTVLEKGSKSSTGKASRKVYIWAALASHLRLVHFFNENGSRARKVLTQYIKPDYRGAI QTDGLGDYKILETDEYPHAVRLACFQHCKRKFLDIKENKDAREVIEIINKLYQKEHEMPAGYSPRQIMKYKKKHASPILN ELKRKLLAIQAEKSTLPKSSLGKAVNYALKEYPALSNYILAPEYELDNNAIERINRYISLSRRNSLFCGSHQGVKRAALI YSLACSCRMNNINTFEYFKELLNKAVSLNPNTDKNVLRELLPDKWKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 60637; Mature: 60637
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYGRIITMLEEQLRFSKTQNAQLIEQNARQAELISRMASQIETLTASVHSLEQALLSRD CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASLEQALVTKRALGKLISNKSEKIVTAPPPCSPSDETPPKKVAPSAKERGNNNAKRKEHF CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCCCCHHHCCCCCCCHHHHC DLEVREHDIYPSRSGFQPELGKFLKTVDSIRYELVPPRFIKHIHHLHYYRYRGNIIYGNL CCEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCEEECCC PATPLLNSSYDASFIAGILQLRYIYSMPVERIIKFFGESGFDINKSTAHGLIKKTAWLFD CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH SLEQALGEAVRQDEYLHMDESYYTVLEKGSKSSTGKASRKVYIWAALASHLRLVHFFNEN HHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC GSRARKVLTQYIKPDYRGAIQTDGLGDYKILETDEYPHAVRLACFQHCKRKFLDIKENKD CHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC AREVIEIINKLYQKEHEMPAGYSPRQIMKYKKKHASPILNELKRKLLAIQAEKSTLPKSS HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH LGKAVNYALKEYPALSNYILAPEYELDNNAIERINRYISLSRRNSLFCGSHQGVKRAALI HHHHHHHHHHHCCCHHCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH YSLACSCRMNNINTFEYFKELLNKAVSLNPNTDKNVLRELLPDKWKKR HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCC >Mature Secondary Structure MNYGRIITMLEEQLRFSKTQNAQLIEQNARQAELISRMASQIETLTASVHSLEQALLSRD CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASLEQALVTKRALGKLISNKSEKIVTAPPPCSPSDETPPKKVAPSAKERGNNNAKRKEHF CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCCCCHHHCCCCCCCHHHHC DLEVREHDIYPSRSGFQPELGKFLKTVDSIRYELVPPRFIKHIHHLHYYRYRGNIIYGNL CCEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCEEECCC PATPLLNSSYDASFIAGILQLRYIYSMPVERIIKFFGESGFDINKSTAHGLIKKTAWLFD CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH SLEQALGEAVRQDEYLHMDESYYTVLEKGSKSSTGKASRKVYIWAALASHLRLVHFFNEN HHHHHHHHHHHCCCCEECCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCC GSRARKVLTQYIKPDYRGAIQTDGLGDYKILETDEYPHAVRLACFQHCKRKFLDIKENKD CHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC AREVIEIINKLYQKEHEMPAGYSPRQIMKYKKKHASPILNELKRKLLAIQAEKSTLPKSS HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH LGKAVNYALKEYPALSNYILAPEYELDNNAIERINRYISLSRRNSLFCGSHQGVKRAALI HHHHHHHHHHHCCCHHCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH YSLACSCRMNNINTFEYFKELLNKAVSLNPNTDKNVLRELLPDKWKKR HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]