| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010053
Identifier: 150010053
GI number: 150010053
Start: 4239989
End: 4243003
Strand: Direct
Name: 150010053
Synonym: BDI_3472
Alternate gene names: NA
Gene position: 4239989-4243003 (Clockwise)
Preceding gene: 150010051
Following gene: 150010055
Centisome position: 88.12
GC content: 43.58
Gene sequence:
>3015_bases ATGAACAAGAGAATTTCTACGTTGATGACAATGGGCTTGCTGACCGCAGGTGCATTGTTTACTACTGCGAATGCTCAAAC AACCAAAGAAGCGGCAGATACCCAATTCAATGGCAGCAAGTATTATTATCTTGCGAATGAGAATGGCGGAACTTACAGCT ACATTGGTGGACAGAGCGTGAAAAAAGGTACTGCGGAGCAATACACCGCATTGAATACTACGGCGGAAACTGATAAGGAT GTAGTTAGTGGCGATGGTGCGTATTTATGGGCTATTTCTCATGTAACTCGTAATGGTAAATCCTATTTTACGTTTAAGAA CAAGGAAACAGGTACTTTATTGTCTTTTGCCACGGATGGTACAATCACTACGACGGTGGATGCAGGCAAGGCTAATGAGT TGACATGGTTGGACGCAAACAAGTATATTCAAGCAGGTAAGGCTATCCAAGCCGTTGACGCTTCTCACCAAATCGGGCTT TCGGGTACAACTTGGTCAATGAACTCTAGCGGAGTAAATATTCAAGTTTTCGTACAGGATGCAGCTCCTGTTTCTGTTGA TGACTTAAATGCGGCTTTAGGTAATGGTTTCGCTTTGAGTTTTCCGGCGATTAATCCACAGCCGAAGGAGAATATCTTCG ATCAGAAGATTAGGGCTTATAACTTTGCTGGAGAGACTTGGGCTACAAACTTGTCTTTACCGTCAGGAACTTATTTCGCC GTATCTGCTCCGAAAGGTGGTATTGTAGATGAGGCAACTTTCAAGGCTTCTACCTTTATCGCTGTAGACCCGGTAAACCA TTTTGGTATCAATGCGCTGAAGAGAGCGGATGGCGTTGGTTTCGCTTTCAAGTTGGTATCCGGAGAGAATTTGGTAATGA CTGCAAACACGTCTAAGGAGCAAGTTTACGCCGGTAACGCTGCGTTTACGGTATCAGAGATGGATAACGTAAACAAACCG GGTGAATATACATTGAAACTGTCTTCCGTACGTGTGAAGAAAGATGCGGCTAAAGACGATCAAACTACAGTTCCTGATGT TTATGTAGACGCTATTACCTCTACAGGCACTACTTATGTAACAACGACTAGCAAGCCGACTACCGCAAAATGTACGATTA GCACTTCCAATATGCTGAAAGCTTCTGAATTGTTGAGTAAGGATGCGCCGTCCGTATTTAATGTATTGTTCGTAAGCAAT GAGAAGAATGTGACTAAATCCGGTTCTTCCGAATACGGTAAGTACTTAGGTTTAAAAGTAGGAACGAGCGATTATGAGTT GTTCGCTCAAGGCCCGGATTATGTAAACTTGAACGCTCCGCAGAATCAGTGGGTAGTAACTAAGATTGACGGGCAGAAGT TCACGTTCACGAACCGTGAGGTAAATACCTATAATACTTCTACGGGTGCTGCCACAGGCCTTTCATTCACGGCTTCTTTA CGTAAGACCGATGAGGCTAATGTTTACGAAGTAAATGCGGAGTCTAAGACATTCACTTATGCTTATGTTGCAAATAACTC ATATACGATTTCTAATGACAAAGATTTGGCAACAGTAGATGGCTTGAAGATCAAATTGATCCCTGCTACGGTAACTCCTT CCGCAGGTTACGCTGATTATTCAGACGCTGAGCTTGCTGAGTTAGCTAGACTGAAATTTACGGTTGGATCGAATGTTCTT TATAAGGATTTGTACTTGAAAGCTAAATATACAGGCTCTACTCCTTCTTCTGTAGAGGCTACTCAAGAAGCGTTGGATGC CGCTGAATGGGAAATCATCAAGTTCGATTGCAGTGCCGCTGAAAGCGACGTGGCTAAATCCGATACGATCTATGGATCTA CAAAATACGCTTATATCGTAAAAGACGAAGAGACTAAGACGAAAGACGTGAAAGATATCGCTATCGTATCTTACGCATTC AAATTGCATATGGACGGTAAGGCTTTCTATTTGAATGAAACTCGTGGAAGCTATTCACTTATTCAAGAAGATGACGTGGA AGACGCTCCTAGATTTATCGTGAAGGAGAACAAGAACGGTTCCGCTTATTTAATTAAGGCTGGTACAGAACGTAAATACA CAGAGATCATTAATAAGAATACGCAAGGTTTGGCTTTGAGTAGTACGGATGGCAAGTTGACGCAGGAAAGTATTTATGCG ACAGCAAAAGACGTAAAAGCTAGTTTCTTCGTAGTGAGAGATATCACGACTCCTTCCTTGCCTTCTGTTCTTAGACATGC TTCTTTCCAAGCATTGGAAGGTGGTTTCGTGGCTGTAGGCGAGGCTAACGACGCTGTTATCGCTCCGACAAGCGCAGATG CGGAGAACTTGACATTCTGGTTGGATACTGCTGATACGAAAGCTTATACTCCTTCATTCTATATCTCTAAGGGTGTTGAT ACGACAGCCAACGCTCCGAGAATGTTCTTGTATAACGCTAAGGATTCCGCTTCTTATTACAACCCGGGTTCTGCTAGCCT AGTAACAGACGATAGCTATAAGTTGGTGGATCGCACCTCTATCAAGGCTATTTTCCGCCCGGCTACTTTGGTAGGTATCG ATACTTTGTCTACTACTGTAAAAGGTAAGGAAACAGAGGTGACCGCTAAGAATGGCTTGAACAACTTTAAGTTCCAGATC GTATTGAAAGATGCTACTGTAGAAGGTGAGTATATCATCAAGAGTTTATCTAGTTCAAACTATATCTTCAACTTGAACGG TAAACTTGGATTCACGAACGATAAATCAGAGGCTTTGGTCGTAAGCGTTGAGAACGGTATCATCCCGACCGGTAACGAGT CTATCGACAGCTCCGCCTCTTCTATCGTAGTGATCGGCAACGCCGGTTCCGTAACGATCCAAGGCGCTCAAGGCGAGACG GCTTATGTTCGTAACCTGTTGGGTATGCCATTGGCTGAGACAGTGGTTACTTCCGATAACGCTACGATCGCTGTTCCCGC AGGAATCGTTCTTGTAACGGTTGGCGACGAGACTGTAAAGGTGGTCGTTAAATAA
Upstream 100 bases:
>100_bases AAACGATCGTTTAGACTAGTCGTTTTCGAATAGGAGGTGATCGGTTAATATGTTGAATGATATTTAATTAACACTATTAT TAATATTTAAATTAGAGATT
Downstream 100 bases:
>100_bases GACATGTAAAGGAATAATGAAAAATAAATCGAAAATCATCCCCGTGCGGATTATCCAAGTATCCCGTGAGGGCGAACAAG CGGGAATGGATTAATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 1004; Mature: 1004
Protein sequence:
>1004_residues MNKRISTLMTMGLLTAGALFTTANAQTTKEAADTQFNGSKYYYLANENGGTYSYIGGQSVKKGTAEQYTALNTTAETDKD VVSGDGAYLWAISHVTRNGKSYFTFKNKETGTLLSFATDGTITTTVDAGKANELTWLDANKYIQAGKAIQAVDASHQIGL SGTTWSMNSSGVNIQVFVQDAAPVSVDDLNAALGNGFALSFPAINPQPKENIFDQKIRAYNFAGETWATNLSLPSGTYFA VSAPKGGIVDEATFKASTFIAVDPVNHFGINALKRADGVGFAFKLVSGENLVMTANTSKEQVYAGNAAFTVSEMDNVNKP GEYTLKLSSVRVKKDAAKDDQTTVPDVYVDAITSTGTTYVTTTSKPTTAKCTISTSNMLKASELLSKDAPSVFNVLFVSN EKNVTKSGSSEYGKYLGLKVGTSDYELFAQGPDYVNLNAPQNQWVVTKIDGQKFTFTNREVNTYNTSTGAATGLSFTASL RKTDEANVYEVNAESKTFTYAYVANNSYTISNDKDLATVDGLKIKLIPATVTPSAGYADYSDAELAELARLKFTVGSNVL YKDLYLKAKYTGSTPSSVEATQEALDAAEWEIIKFDCSAAESDVAKSDTIYGSTKYAYIVKDEETKTKDVKDIAIVSYAF KLHMDGKAFYLNETRGSYSLIQEDDVEDAPRFIVKENKNGSAYLIKAGTERKYTEIINKNTQGLALSSTDGKLTQESIYA TAKDVKASFFVVRDITTPSLPSVLRHASFQALEGGFVAVGEANDAVIAPTSADAENLTFWLDTADTKAYTPSFYISKGVD TTANAPRMFLYNAKDSASYYNPGSASLVTDDSYKLVDRTSIKAIFRPATLVGIDTLSTTVKGKETEVTAKNGLNNFKFQI VLKDATVEGEYIIKSLSSSNYIFNLNGKLGFTNDKSEALVVSVENGIIPTGNESIDSSASSIVVIGNAGSVTIQGAQGET AYVRNLLGMPLAETVVTSDNATIAVPAGIVLVTVGDETVKVVVK
Sequences:
>Translated_1004_residues MNKRISTLMTMGLLTAGALFTTANAQTTKEAADTQFNGSKYYYLANENGGTYSYIGGQSVKKGTAEQYTALNTTAETDKD VVSGDGAYLWAISHVTRNGKSYFTFKNKETGTLLSFATDGTITTTVDAGKANELTWLDANKYIQAGKAIQAVDASHQIGL SGTTWSMNSSGVNIQVFVQDAAPVSVDDLNAALGNGFALSFPAINPQPKENIFDQKIRAYNFAGETWATNLSLPSGTYFA VSAPKGGIVDEATFKASTFIAVDPVNHFGINALKRADGVGFAFKLVSGENLVMTANTSKEQVYAGNAAFTVSEMDNVNKP GEYTLKLSSVRVKKDAAKDDQTTVPDVYVDAITSTGTTYVTTTSKPTTAKCTISTSNMLKASELLSKDAPSVFNVLFVSN EKNVTKSGSSEYGKYLGLKVGTSDYELFAQGPDYVNLNAPQNQWVVTKIDGQKFTFTNREVNTYNTSTGAATGLSFTASL RKTDEANVYEVNAESKTFTYAYVANNSYTISNDKDLATVDGLKIKLIPATVTPSAGYADYSDAELAELARLKFTVGSNVL YKDLYLKAKYTGSTPSSVEATQEALDAAEWEIIKFDCSAAESDVAKSDTIYGSTKYAYIVKDEETKTKDVKDIAIVSYAF KLHMDGKAFYLNETRGSYSLIQEDDVEDAPRFIVKENKNGSAYLIKAGTERKYTEIINKNTQGLALSSTDGKLTQESIYA TAKDVKASFFVVRDITTPSLPSVLRHASFQALEGGFVAVGEANDAVIAPTSADAENLTFWLDTADTKAYTPSFYISKGVD TTANAPRMFLYNAKDSASYYNPGSASLVTDDSYKLVDRTSIKAIFRPATLVGIDTLSTTVKGKETEVTAKNGLNNFKFQI VLKDATVEGEYIIKSLSSSNYIFNLNGKLGFTNDKSEALVVSVENGIIPTGNESIDSSASSIVVIGNAGSVTIQGAQGET AYVRNLLGMPLAETVVTSDNATIAVPAGIVLVTVGDETVKVVVK >Mature_1004_residues MNKRISTLMTMGLLTAGALFTTANAQTTKEAADTQFNGSKYYYLANENGGTYSYIGGQSVKKGTAEQYTALNTTAETDKD VVSGDGAYLWAISHVTRNGKSYFTFKNKETGTLLSFATDGTITTTVDAGKANELTWLDANKYIQAGKAIQAVDASHQIGL SGTTWSMNSSGVNIQVFVQDAAPVSVDDLNAALGNGFALSFPAINPQPKENIFDQKIRAYNFAGETWATNLSLPSGTYFA VSAPKGGIVDEATFKASTFIAVDPVNHFGINALKRADGVGFAFKLVSGENLVMTANTSKEQVYAGNAAFTVSEMDNVNKP GEYTLKLSSVRVKKDAAKDDQTTVPDVYVDAITSTGTTYVTTTSKPTTAKCTISTSNMLKASELLSKDAPSVFNVLFVSN EKNVTKSGSSEYGKYLGLKVGTSDYELFAQGPDYVNLNAPQNQWVVTKIDGQKFTFTNREVNTYNTSTGAATGLSFTASL RKTDEANVYEVNAESKTFTYAYVANNSYTISNDKDLATVDGLKIKLIPATVTPSAGYADYSDAELAELARLKFTVGSNVL YKDLYLKAKYTGSTPSSVEATQEALDAAEWEIIKFDCSAAESDVAKSDTIYGSTKYAYIVKDEETKTKDVKDIAIVSYAF KLHMDGKAFYLNETRGSYSLIQEDDVEDAPRFIVKENKNGSAYLIKAGTERKYTEIINKNTQGLALSSTDGKLTQESIYA TAKDVKASFFVVRDITTPSLPSVLRHASFQALEGGFVAVGEANDAVIAPTSADAENLTFWLDTADTKAYTPSFYISKGVD TTANAPRMFLYNAKDSASYYNPGSASLVTDDSYKLVDRTSIKAIFRPATLVGIDTLSTTVKGKETEVTAKNGLNNFKFQI VLKDATVEGEYIIKSLSSSNYIFNLNGKLGFTNDKSEALVVSVENGIIPTGNESIDSSASSIVVIGNAGSVTIQGAQGET AYVRNLLGMPLAETVVTSDNATIAVPAGIVLVTVGDETVKVVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107702; Mature: 107702
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRISTLMTMGLLTAGALFTTANAQTTKEAADTQFNGSKYYYLANENGGTYSYIGGQSV CCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCEEEEECCCCC KKGTAEQYTALNTTAETDKDVVSGDGAYLWAISHVTRNGKSYFTFKNKETGTLLSFATDG CCCCCHHEEEECCCCCCCCHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCC TITTTVDAGKANELTWLDANKYIQAGKAIQAVDASHQIGLSGTTWSMNSSGVNIQVFVQD EEEEEEECCCCCCEEEECCHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEC AAPVSVDDLNAALGNGFALSFPAINPQPKENIFDQKIRAYNFAGETWATNLSLPSGTYFA CCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCEEE VSAPKGGIVDEATFKASTFIAVDPVNHFGINALKRADGVGFAFKLVSGENLVMTANTSKE EECCCCCCCCCCEECEEEEEEECCCHHCCCHHHHHCCCCCEEEEEECCCEEEEEECCCCC QVYAGNAAFTVSEMDNVNKPGEYTLKLSSVRVKKDAAKDDQTTVPDVYVDAITSTGTTYV EEEECCEEEEEEHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEE TTTSKPTTAKCTISTSNMLKASELLSKDAPSVFNVLFVSNEKNVTKSGSSEYGKYLGLKV EECCCCCEEEEEEECHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEE GTSDYELFAQGPDYVNLNAPQNQWVVTKIDGQKFTFTNREVNTYNTSTGAATGLSFTASL CCCCEEEEECCCCEEECCCCCCCEEEEEECCCEEEEECCEEEEEECCCCCCCCEEEEEEE RKTDEANVYEVNAESKTFTYAYVANNSYTISNDKDLATVDGLKIKLIPATVTPSAGYADY CCCCCCCEEEECCCCCEEEEEEEECCEEEECCCCCEEEECCEEEEEEEEEECCCCCCCCC SDAELAELARLKFTVGSNVLYKDLYLKAKYTGSTPSSVEATQEALDAAEWEIIKFDCSAA CCHHHHHHHEEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCC ESDVAKSDTIYGSTKYAYIVKDEETKTKDVKDIAIVSYAFKLHMDGKAFYLNETRGSYSL CCCCCCCCEEECCCEEEEEEECCCCCCCCHHHEEEEEEEEEEEECCEEEEEECCCCCEEE IQEDDVEDAPRFIVKENKNGSAYLIKAGTERKYTEIINKNTQGLALSSTDGKLTQESIYA EECCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHH TAKDVKASFFVVRDITTPSLPSVLRHASFQALEGGFVAVGEANDAVIAPTSADAENLTFW HHHCCCEEEEEEEECCCCCHHHHHHHCCHHCCCCCEEEEECCCCCEEECCCCCCCCEEEE LDTADTKAYTPSFYISKGVDTTANAPRMFLYNAKDSASYYNPGSASLVTDDSYKLVDRTS EECCCCCEECCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCC IKAIFRPATLVGIDTLSTTVKGKETEVTAKNGLNNFKFQIVLKDATVEGEYIIKSLSSSN CCEEECCEEEEEEEHHEEEECCCCEEEEHHCCCCCEEEEEEEEECCCCCHHHEEECCCCC YIFNLNGKLGFTNDKSEALVVSVENGIIPTGNESIDSSASSIVVIGNAGSVTIQGAQGET EEEEECCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCH AYVRNLLGMPLAETVVTSDNATIAVPAGIVLVTVGDETVKVVVK HHHHHHHCCCHHHEEEECCCCEEEEECCEEEEEECCCEEEEEEC >Mature Secondary Structure MNKRISTLMTMGLLTAGALFTTANAQTTKEAADTQFNGSKYYYLANENGGTYSYIGGQSV CCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCEEEEECCCCC KKGTAEQYTALNTTAETDKDVVSGDGAYLWAISHVTRNGKSYFTFKNKETGTLLSFATDG CCCCCHHEEEECCCCCCCCHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCC TITTTVDAGKANELTWLDANKYIQAGKAIQAVDASHQIGLSGTTWSMNSSGVNIQVFVQD EEEEEEECCCCCCEEEECCHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEC AAPVSVDDLNAALGNGFALSFPAINPQPKENIFDQKIRAYNFAGETWATNLSLPSGTYFA CCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHEEECCCCCEEEEECCCCCCEEE VSAPKGGIVDEATFKASTFIAVDPVNHFGINALKRADGVGFAFKLVSGENLVMTANTSKE EECCCCCCCCCCEECEEEEEEECCCHHCCCHHHHHCCCCCEEEEEECCCEEEEEECCCCC QVYAGNAAFTVSEMDNVNKPGEYTLKLSSVRVKKDAAKDDQTTVPDVYVDAITSTGTTYV EEEECCEEEEEEHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEE TTTSKPTTAKCTISTSNMLKASELLSKDAPSVFNVLFVSNEKNVTKSGSSEYGKYLGLKV EECCCCCEEEEEEECHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEE GTSDYELFAQGPDYVNLNAPQNQWVVTKIDGQKFTFTNREVNTYNTSTGAATGLSFTASL CCCCEEEEECCCCEEECCCCCCCEEEEEECCCEEEEECCEEEEEECCCCCCCCEEEEEEE RKTDEANVYEVNAESKTFTYAYVANNSYTISNDKDLATVDGLKIKLIPATVTPSAGYADY CCCCCCCEEEECCCCCEEEEEEEECCEEEECCCCCEEEECCEEEEEEEEEECCCCCCCCC SDAELAELARLKFTVGSNVLYKDLYLKAKYTGSTPSSVEATQEALDAAEWEIIKFDCSAA CCHHHHHHHEEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCC ESDVAKSDTIYGSTKYAYIVKDEETKTKDVKDIAIVSYAFKLHMDGKAFYLNETRGSYSL CCCCCCCCEEECCCEEEEEEECCCCCCCCHHHEEEEEEEEEEEECCEEEEEECCCCCEEE IQEDDVEDAPRFIVKENKNGSAYLIKAGTERKYTEIINKNTQGLALSSTDGKLTQESIYA EECCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHH TAKDVKASFFVVRDITTPSLPSVLRHASFQALEGGFVAVGEANDAVIAPTSADAENLTFW HHHCCCEEEEEEEECCCCCHHHHHHHCCHHCCCCCEEEEECCCCCEEECCCCCCCCEEEE LDTADTKAYTPSFYISKGVDTTANAPRMFLYNAKDSASYYNPGSASLVTDDSYKLVDRTS EECCCCCEECCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEECCC IKAIFRPATLVGIDTLSTTVKGKETEVTAKNGLNNFKFQIVLKDATVEGEYIIKSLSSSN CCEEECCEEEEEEEHHEEEECCCCEEEEHHCCCCCEEEEEEEEECCCCCHHHEEECCCCC YIFNLNGKLGFTNDKSEALVVSVENGIIPTGNESIDSSASSIVVIGNAGSVTIQGAQGET EEEEECCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCH AYVRNLLGMPLAETVVTSDNATIAVPAGIVLVTVGDETVKVVVK HHHHHHHCCCHHHEEEECCCCEEEEECCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA