| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is fepA [C]
Identifier: 150010039
GI number: 150010039
Start: 4215685
End: 4218441
Strand: Direct
Name: fepA [C]
Synonym: BDI_3458
Alternate gene names: 150010039
Gene position: 4215685-4218441 (Clockwise)
Preceding gene: 150010038
Following gene: 150010040
Centisome position: 87.62
GC content: 47.23
Gene sequence:
>2757_bases ATGACAGAGTGGATGAATAAATGGCTTATGGCCATTTTTTGCTGGATGATTTTTATGCCTGTTCCAGACCTCTTGGCCCA ATCAGCCAAGACGAAGGATGATCCCCGGATTACGTTGCGTATGAAGGAGGTTTCGTTGCCGGAGGTCTTGTCAGAGATCG AAAGACAGGCGGGCGTGACCTTCTCGTATGAGTCTTCTTTGTTGAAAGAGCTTCCGAAGATCAGTTTCCAAGTGAAAGAT GAGGCATTGACGGATTGTTTGACCCGCTTGTTCGAGTCGTATCCGATCGTGTATAAGGTGAGTGGAAAGATCGTGATTCT GAAGCGTAGACAGAGACAGGTAACGATCAGCGGCTTCGTGAGGGACCAAGCGTCCTCGGAGTCTCTGATCGGAGCCTCTG TTTATGAGGTCGCCAGCCGGAAAGGCTCGGCTACGAATAGCTATGGTTTTTTCAGTTTGACGCTTCCGCCGGGGAATATC CGCTTGCATGCTTCTTACATTGGCTATGAGAGCTGTTCCTTTAATTTCACGGAGTTGGATAGGGATACTTTGTTAAATAT TGAGTTGCGTCCGAACGCCCGTCTGGAGGAAGTGGTGGTTACCGCTTCGGAGCGGGATCGTTTGTCTGTAAATAACACCT TGATGGGAACGATGGAGTTTAGCCAGAAGACGATCAAGGCGACACCGACCCTGTTTGGTGAGTCCGATATCGTGAAGACC TTGCAACTGACTCCGGGTGTAGCCAGTGGGACAGAGGGACTGGCCGGTTTATATGTTCGTGGCGGCGACCAAGATGGAAA TTTGTTTTTGATAGACGGTAATCCGGTTTACCAGATCAATCATGTCGGCGGGCTATTCTCCGCTTTCAATCCGGAGGCGA TCCGTAATCTGGACTTTTTCAAGGCGGGTTTCCCTGCGAGATATGGCGGGCGACTCTCGTCTGTGGTAGATGTCCATACC AAAGAGGGCAATATGAAAGAGTACCATGGTAGCGCTACGATCGGGCTGATCTCCGGTAATCTGAGCTTGGAAGGCCCTAT CATCAAGGATCGCACGGCTTTTCAGATAGCGCTTAGACGCTCGTGGCTGGATGTATTCTCTGCCCCGACGATAGCGATCG TAAACAGGGTCATAAAAAAGAACGGGAGCCGGATCAACCTTCGTTACGCTTTTCACGATTTGAATTTAAAGCTTAATCAT CGTTTCAGCGATCGCAGCCGGATGTTTTTCAGCTTATATAACGGGAATGATGTATTAAAAGGAGGGGGAACGGATTTCTC AACAGAAGAAGAGCAAGTCCCTTATACGGATGGTACCCATTCATCGCTGCGTTGGGGTAATTTGATGGGAACCTTGGGCT GGACTTATGTCTTCAATAACCGTTTGTTCGGACGGGTTTCCGGGGTCTTTTCACGGTATCGCTCGAATGTACGGAGTTCA AAAGAATATAATTATGGTGTGGAAGGAGAAGATAATTATCTCTCTTCTTCATCGGAAACGAGTAGTTCTACCTCTATCTT GGATATGGGCGTCCGTTCCTCTTTTGATTACACGCCTTCTACGTCGCATGTGATTCGTTTTGGAGGGGATTTCTTGATGC ACCGTTTCCGCCCGGAGTATAATGAGGTGAAAGCAGCCGGTTCCGGTATGCTGGAGTTTTCGAATATAGGGAAAATATAT ACAAATGATCTGCTATGGGCCCGTGAGGCGGCTGTCTTCGGAGAGGATGATTGGAATGTCTTACCTAGCTTGCGTTTGAA TGCGGGGCTTCGGTTTAGCCTGTTCAATGTGGAGCGGAAGGCTTATACCTTATTGGAGCCTCGCGCTTCCTTGAGATGGT TGCTACGTGACGATCTTAGCTTCAAAGCCTCATACGCCCGTATGGGGCAATATATCCATTTATTGGGCAACAGTTATATA AATTTGCCGACGGATGCGTGGATGCCTGTTACCCGTAAGTTGAAACCTTTAATCAGCGATCAAGTCTCCGTTGGTTTCTA TTATAATCTGATGCGTTCCTATAGTTTCTCGGTGGAGGGGTATTATAAATGGATGAAGAACCTGTTGGATTATAAAGACG GCTATTCCTTCTTGCCCGGTACGGCGGCTTGGGAGGAAAAAATGGCGGTCGGCAAGGGACGTTCGTATGGCGTGGAGTTC TTGGCTCGCAAGGAAAGCGGACGTACGACCGGTTGGATAGGATATACACTTTCATGGTCGGATCGGCGTTTCGATGAGAT CGATAACGGGCGACGCTTTCCGGCACGTTACGATAACCGGCATAAGCTGAATATCGTGGTTTCGCATAAACTGTCGGATA AGGTGGAACTGACAGCCGCTTGGACGTATACTTCCGGCAATCGAATGACCTTGTCGTTGGAGAGTTATGAGCAAGCTGGT ACGCTTACTATTTCCAACCAATACAAGATGAATAACTGGTGGGAACCATCCGGGGAAGTGGTGGATTTGTATACACGTCG TAATAATTACCAGATGCCGGCTTATCATCGTCTGGATTTGGGACTTAATATTTACCGTCCGAAGAAGAAGGGACGAATGG GCATCTGGAATATCAGTATTTATAATGTATATAGCCGGATGAATCCGTTTATGGTCTATAAAAGTGATAACTGGGAACGA ACGAATAACTTAGTCCCAGATTCTTCTTCTCCCTATAGCGGTAAAACAAAACCTTGTTTTAAGTTGATAGGTATTATGCC TATCATACCTTCCCTATCATATACTTATAAATTCTAG
Upstream 100 bases:
>100_bases ATGAAGCGGTAAGTTCACGAGGTATGAAAAAAAGGCTTTTCCTTGATAGGGGTATTTCCGGGAGATCCTGTTTTATCAAT GAACTCAATAAAGTAGAATG
Downstream 100 bases:
>100_bases GAAGATGAAACAGATAAAGAATATTCTAATAAATACGATTTGTATAGTAAGCCTGTTTGGTTTGATGTCTTGCATCAAGG AGATCGACCTTGAATCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; NB-Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB Family Protein; Ferric Aerobactin Receptor; NB-Dependent Outer Membrane Receptor; NB Dependent Outer Membrane Protein; Nb Family Protein; NB-Linked Outer Membrane Receptor Protein; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; NB Dependent Receptor Domain Protein; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Receptor Protein; Outer Membrane Protein Omp; NB Dependent Receptor Domain-Containing Protein
Number of amino acids: Translated: 918; Mature: 917
Protein sequence:
>918_residues MTEWMNKWLMAIFCWMIFMPVPDLLAQSAKTKDDPRITLRMKEVSLPEVLSEIERQAGVTFSYESSLLKELPKISFQVKD EALTDCLTRLFESYPIVYKVSGKIVILKRRQRQVTISGFVRDQASSESLIGASVYEVASRKGSATNSYGFFSLTLPPGNI RLHASYIGYESCSFNFTELDRDTLLNIELRPNARLEEVVVTASERDRLSVNNTLMGTMEFSQKTIKATPTLFGESDIVKT LQLTPGVASGTEGLAGLYVRGGDQDGNLFLIDGNPVYQINHVGGLFSAFNPEAIRNLDFFKAGFPARYGGRLSSVVDVHT KEGNMKEYHGSATIGLISGNLSLEGPIIKDRTAFQIALRRSWLDVFSAPTIAIVNRVIKKNGSRINLRYAFHDLNLKLNH RFSDRSRMFFSLYNGNDVLKGGGTDFSTEEEQVPYTDGTHSSLRWGNLMGTLGWTYVFNNRLFGRVSGVFSRYRSNVRSS KEYNYGVEGEDNYLSSSSETSSSTSILDMGVRSSFDYTPSTSHVIRFGGDFLMHRFRPEYNEVKAAGSGMLEFSNIGKIY TNDLLWAREAAVFGEDDWNVLPSLRLNAGLRFSLFNVERKAYTLLEPRASLRWLLRDDLSFKASYARMGQYIHLLGNSYI NLPTDAWMPVTRKLKPLISDQVSVGFYYNLMRSYSFSVEGYYKWMKNLLDYKDGYSFLPGTAAWEEKMAVGKGRSYGVEF LARKESGRTTGWIGYTLSWSDRRFDEIDNGRRFPARYDNRHKLNIVVSHKLSDKVELTAAWTYTSGNRMTLSLESYEQAG TLTISNQYKMNNWWEPSGEVVDLYTRRNNYQMPAYHRLDLGLNIYRPKKKGRMGIWNISIYNVYSRMNPFMVYKSDNWER TNNLVPDSSSPYSGKTKPCFKLIGIMPIIPSLSYTYKF
Sequences:
>Translated_918_residues MTEWMNKWLMAIFCWMIFMPVPDLLAQSAKTKDDPRITLRMKEVSLPEVLSEIERQAGVTFSYESSLLKELPKISFQVKD EALTDCLTRLFESYPIVYKVSGKIVILKRRQRQVTISGFVRDQASSESLIGASVYEVASRKGSATNSYGFFSLTLPPGNI RLHASYIGYESCSFNFTELDRDTLLNIELRPNARLEEVVVTASERDRLSVNNTLMGTMEFSQKTIKATPTLFGESDIVKT LQLTPGVASGTEGLAGLYVRGGDQDGNLFLIDGNPVYQINHVGGLFSAFNPEAIRNLDFFKAGFPARYGGRLSSVVDVHT KEGNMKEYHGSATIGLISGNLSLEGPIIKDRTAFQIALRRSWLDVFSAPTIAIVNRVIKKNGSRINLRYAFHDLNLKLNH RFSDRSRMFFSLYNGNDVLKGGGTDFSTEEEQVPYTDGTHSSLRWGNLMGTLGWTYVFNNRLFGRVSGVFSRYRSNVRSS KEYNYGVEGEDNYLSSSSETSSSTSILDMGVRSSFDYTPSTSHVIRFGGDFLMHRFRPEYNEVKAAGSGMLEFSNIGKIY TNDLLWAREAAVFGEDDWNVLPSLRLNAGLRFSLFNVERKAYTLLEPRASLRWLLRDDLSFKASYARMGQYIHLLGNSYI NLPTDAWMPVTRKLKPLISDQVSVGFYYNLMRSYSFSVEGYYKWMKNLLDYKDGYSFLPGTAAWEEKMAVGKGRSYGVEF LARKESGRTTGWIGYTLSWSDRRFDEIDNGRRFPARYDNRHKLNIVVSHKLSDKVELTAAWTYTSGNRMTLSLESYEQAG TLTISNQYKMNNWWEPSGEVVDLYTRRNNYQMPAYHRLDLGLNIYRPKKKGRMGIWNISIYNVYSRMNPFMVYKSDNWER TNNLVPDSSSPYSGKTKPCFKLIGIMPIIPSLSYTYKF >Mature_917_residues TEWMNKWLMAIFCWMIFMPVPDLLAQSAKTKDDPRITLRMKEVSLPEVLSEIERQAGVTFSYESSLLKELPKISFQVKDE ALTDCLTRLFESYPIVYKVSGKIVILKRRQRQVTISGFVRDQASSESLIGASVYEVASRKGSATNSYGFFSLTLPPGNIR LHASYIGYESCSFNFTELDRDTLLNIELRPNARLEEVVVTASERDRLSVNNTLMGTMEFSQKTIKATPTLFGESDIVKTL QLTPGVASGTEGLAGLYVRGGDQDGNLFLIDGNPVYQINHVGGLFSAFNPEAIRNLDFFKAGFPARYGGRLSSVVDVHTK EGNMKEYHGSATIGLISGNLSLEGPIIKDRTAFQIALRRSWLDVFSAPTIAIVNRVIKKNGSRINLRYAFHDLNLKLNHR FSDRSRMFFSLYNGNDVLKGGGTDFSTEEEQVPYTDGTHSSLRWGNLMGTLGWTYVFNNRLFGRVSGVFSRYRSNVRSSK EYNYGVEGEDNYLSSSSETSSSTSILDMGVRSSFDYTPSTSHVIRFGGDFLMHRFRPEYNEVKAAGSGMLEFSNIGKIYT NDLLWAREAAVFGEDDWNVLPSLRLNAGLRFSLFNVERKAYTLLEPRASLRWLLRDDLSFKASYARMGQYIHLLGNSYIN LPTDAWMPVTRKLKPLISDQVSVGFYYNLMRSYSFSVEGYYKWMKNLLDYKDGYSFLPGTAAWEEKMAVGKGRSYGVEFL ARKESGRTTGWIGYTLSWSDRRFDEIDNGRRFPARYDNRHKLNIVVSHKLSDKVELTAAWTYTSGNRMTLSLESYEQAGT LTISNQYKMNNWWEPSGEVVDLYTRRNNYQMPAYHRLDLGLNIYRPKKKGRMGIWNISIYNVYSRMNPFMVYKSDNWERT NNLVPDSSSPYSGKTKPCFKLIGIMPIIPSLSYTYKF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104568; Mature: 104437
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEWMNKWLMAIFCWMIFMPVPDLLAQSAKTKDDPRITLRMKEVSLPEVLSEIERQAGVT CCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCE FSYESSLLKELPKISFQVKDEALTDCLTRLFESYPIVYKVSGKIVILKRRQRQVTISGFV EEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCEEEEEEEE RDQASSESLIGASVYEVASRKGSATNSYGFFSLTLPPGNIRLHASYIGYESCSFNFTELD ECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHCCC RDTLLNIELRPNARLEEVVVTASERDRLSVNNTLMGTMEFSQKTIKATPTLFGESDIVKT CCEEEEEEECCCCCEEEEEEECCCCCCEEECCEEEEEEHHCCHHEECCCCCCCCCHHEEE LQLTPGVASGTEGLAGLYVRGGDQDGNLFLIDGNPVYQINHVGGLFSAFNPEAIRNLDFF EEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCHHHCCCHHHHHCCHHH KAGFPARYGGRLSSVVDVHTKEGNMKEYHGSATIGLISGNLSLEGPIIKDRTAFQIALRR HCCCCCCCCCCCCCEEEEEECCCCCHHCCCCEEEEEEECCEEECCCEECCCHHHHHHHHH SWLDVFSAPTIAIVNRVIKKNGSRINLRYAFHDLNLKLNHRFSDRSRMFFSLYNGNDVLK HHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCEEEE GGGTDFSTEEEQVPYTDGTHSSLRWGNLMGTLGWTYVFNNRLFGRVSGVFSRYRSNVRSS CCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCC KEYNYGVEGEDNYLSSSSETSSSTSILDMGVRSSFDYTPSTSHVIRFGGDFLMHRFRPEY CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCCH NEVKAAGSGMLEFSNIGKIYTNDLLWAREAAVFGEDDWNVLPSLRLNAGLRFSLFNVERK HHHHHCCCCCEEECCCCCCHHCCHHEEHHHEEECCCCCCCCCCEEECCCCEEEEEECCCC AYTLLEPRASLRWLLRDDLSFKASYARMGQYIHLLGNSYINLPTDAWMPVTRKLKPLISD EEEEECCCHHHHHHHHCCCCHHHHHHHHHHEEEEECCCEECCCCCCCCCHHHHHHHHHHC QVSVGFYYNLMRSYSFSVEGYYKWMKNLLDYKDGYSFLPGTAAWEEKMAVGKGRSYGVEF CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE LARKESGRTTGWIGYTLSWSDRRFDEIDNGRRFPARYDNRHKLNIVVSHKLSDKVELTAA EEECCCCCEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEE WTYTSGNRMTLSLESYEQAGTLTISNQYKMNNWWEPSGEVVDLYTRRNNYQMPAYHRLDL EEEECCCEEEEEECCCCCCCEEEEECCEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEC GLNIYRPKKKGRMGIWNISIYNVYSRMNPFMVYKSDNWERTNNLVPDSSSPYSGKTKPCF CEEEECCCCCCCEEEEEEEEEEHHHCCCCEEEEECCCCHHCCCCCCCCCCCCCCCCCHHH KLIGIMPIIPSLSYTYKF HHHHHHHHCCCCCEEECC >Mature Secondary Structure TEWMNKWLMAIFCWMIFMPVPDLLAQSAKTKDDPRITLRMKEVSLPEVLSEIERQAGVT CHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCE FSYESSLLKELPKISFQVKDEALTDCLTRLFESYPIVYKVSGKIVILKRRQRQVTISGFV EEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCEEEEEEEE RDQASSESLIGASVYEVASRKGSATNSYGFFSLTLPPGNIRLHASYIGYESCSFNFTELD ECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHCCC RDTLLNIELRPNARLEEVVVTASERDRLSVNNTLMGTMEFSQKTIKATPTLFGESDIVKT CCEEEEEEECCCCCEEEEEEECCCCCCEEECCEEEEEEHHCCHHEECCCCCCCCCHHEEE LQLTPGVASGTEGLAGLYVRGGDQDGNLFLIDGNPVYQINHVGGLFSAFNPEAIRNLDFF EEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCHHHCCCHHHHHCCHHH KAGFPARYGGRLSSVVDVHTKEGNMKEYHGSATIGLISGNLSLEGPIIKDRTAFQIALRR HCCCCCCCCCCCCCEEEEEECCCCCHHCCCCEEEEEEECCEEECCCEECCCHHHHHHHHH SWLDVFSAPTIAIVNRVIKKNGSRINLRYAFHDLNLKLNHRFSDRSRMFFSLYNGNDVLK HHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCEEEE GGGTDFSTEEEQVPYTDGTHSSLRWGNLMGTLGWTYVFNNRLFGRVSGVFSRYRSNVRSS CCCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCC KEYNYGVEGEDNYLSSSSETSSSTSILDMGVRSSFDYTPSTSHVIRFGGDFLMHRFRPEY CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHCCCCH NEVKAAGSGMLEFSNIGKIYTNDLLWAREAAVFGEDDWNVLPSLRLNAGLRFSLFNVERK HHHHHCCCCCEEECCCCCCHHCCHHEEHHHEEECCCCCCCCCCEEECCCCEEEEEECCCC AYTLLEPRASLRWLLRDDLSFKASYARMGQYIHLLGNSYINLPTDAWMPVTRKLKPLISD EEEEECCCHHHHHHHHCCCCHHHHHHHHHHEEEEECCCEECCCCCCCCCHHHHHHHHHHC QVSVGFYYNLMRSYSFSVEGYYKWMKNLLDYKDGYSFLPGTAAWEEKMAVGKGRSYGVEF CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEE LARKESGRTTGWIGYTLSWSDRRFDEIDNGRRFPARYDNRHKLNIVVSHKLSDKVELTAA EEECCCCCEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEE WTYTSGNRMTLSLESYEQAGTLTISNQYKMNNWWEPSGEVVDLYTRRNNYQMPAYHRLDL EEEECCCEEEEEECCCCCCCEEEEECCEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEC GLNIYRPKKKGRMGIWNISIYNVYSRMNPFMVYKSDNWERTNNLVPDSSSPYSGKTKPCF CEEEECCCCCCCEEEEEEEEEEHHHCCCCEEEEECCCCHHCCCCCCCCCCCCCCCCCHHH KLIGIMPIIPSLSYTYKF HHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA