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The map label for this gene is ctpA [H]

Identifier: 150009932

GI number: 150009932

Start: 4059599

End: 4061206

Strand: Direct

Name: ctpA [H]

Synonym: BDI_3349

Alternate gene names: 150009932

Gene position: 4059599-4061206 (Clockwise)

Preceding gene: 150009931

Following gene: 150009933

Centisome position: 84.37

GC content: 47.82

Gene sequence:

>1608_bases
ATGAAACGAATATATCTGATGAAAAGAATCGTCTTATCCCTGCTGATCGTTCTAGGTGTGTTTACCGGAGCGACAGCGCA
AAAAGCGAATATGGATGCCCGGAAGCTCCAATTGGCTTTATTCGCCATCTCTAATCTATATGTCGACTCTACTAGCGAGA
CGAAGTTGGTGGAAGACGCTATAGTCGGTATGTTGGATAAGCTAGACCCTCATTCCAATTATATGGATCCGGAGGAGACG
AAAGAGATGACCGAGCCTTTACAAGGCAATTTCGATGGTATCGGCATACAGTTCAATATGTTGACGGATACGCTTTACGT
GATTCAGGTAATCCCCGGAGGTCCCTCTGAGAAGGTGGGGTTGATGGCGGGCGACCGTATTATCCAAGTAGACGATACCT
TGATCGCCGGCGTGAAGATGAAGACTACCGATATCATGAAGAAACTACGCGGACCGAAAGGTACCGAGGTGCGTGTGAAA
GTAAAGCGAGGCAAGTCGCCGGAATTGATGGATTTCAAGATCGTTCGCGGTAAGATTCCCGTGTATAGTCTGGATGCCGC
TTATATGGCGGATAAGAATACCGGTTATATTAAGTTGAACCGTTTCGCCGCTTCTTCCGCCGATGAATTCAGGGAGGCGT
TGGAAAAGCTCCGGAAACAGGGCATGAAGAACTTGATTCTGGATTTGCAGGGAAATGGCGGGGGATATTTGAATATCGCC
ATAGAGCTGGCGGATGAGTTCTTGGATAAAAACCGGTTGATCGTTTATACGAAAGGGAGTAAGCAACCTCGTGAGGAGGC
GAACTCTACCGCTCGCGGACAATTCCAAGAGGGACGTTTGGTCGTGCTGGTGGACGAGTCCTCGGCTTCGGCCAGCGAGA
TCGTCTCCGGCGCTATTCAAGATTGGGACCGGGGCGTGATCGTAGGTCGCCGTACCTTTGGTAAAGGTTTGGTACAGAAA
CCGATTCCCCTGCCGGATGGTTCCATGATTCGTTTGACGGTTTCCCGTTACTATACACCCACCGGACGTTGTATACAAAA
GCCTTACGAGAACGGGAAGATCGAGGAGTACCACCATGATCTGATCGACCGTTATAACCGGGGGGAGTTGATGAGTGCCG
ATAGCATTCATTTCCCCGATTCAATGAAGTATAACACCTTGGTTACCGAGCGTACCGTATATGGAGGTGGAGGTATTATG
CCGGACGTGTTCATCCCGGTAGATACGACTCGCTATACGGATTATCACCGGAAACTGGTAGCTTCCGGTTTAGTCAATCG
GGTGTCCATGAATTATCTGGATCGTAATCGGAACCAGATGATGGCTAAATATCCGAAGTTCCAGCAATATAAGCAAGATT
TCGTGGTCGGAGAGGATATCATGGAGGAGCTTCTGAAGATGGCCGGCGATGAGAAGATTGAGTTTGAGGAAGAAGAATAT
AATCGTTCGAAGCCGTTGATCATGCTTCAGATCAAGGCGCTTATCGCACGGGATCTCTATGATATGGCGCAGTACTTCCA
GATTATCAATGATGATAATCCGAGTTACCAGAAAGCGCTTCAGATTATTAATAATAAAGAAACTTACAATAGGCTTTTAG
GACGTTAG

Upstream 100 bases:

>100_bases
AGCATACGCATATTAGCTCAAGTATTGTCCGTGAGTTGTTACGCTACGGCAAAGACATTTCCCAATTCGTCCCTAAAGAG
ACGAGATTGTATTGAAAATT

Downstream 100 bases:

>100_bases
CCAACGTAAACTGATAAGGGTATGTATTGGACGCTTTTTCTGACATTCGTGAAAATCGGTATGTTTACCATCGGAGGTGG
TTACGCCATGTTGCCGCTTA

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MKRIYLMKRIVLSLLIVLGVFTGATAQKANMDARKLQLALFAISNLYVDSTSETKLVEDAIVGMLDKLDPHSNYMDPEET
KEMTEPLQGNFDGIGIQFNMLTDTLYVIQVIPGGPSEKVGLMAGDRIIQVDDTLIAGVKMKTTDIMKKLRGPKGTEVRVK
VKRGKSPELMDFKIVRGKIPVYSLDAAYMADKNTGYIKLNRFAASSADEFREALEKLRKQGMKNLILDLQGNGGGYLNIA
IELADEFLDKNRLIVYTKGSKQPREEANSTARGQFQEGRLVVLVDESSASASEIVSGAIQDWDRGVIVGRRTFGKGLVQK
PIPLPDGSMIRLTVSRYYTPTGRCIQKPYENGKIEEYHHDLIDRYNRGELMSADSIHFPDSMKYNTLVTERTVYGGGGIM
PDVFIPVDTTRYTDYHRKLVASGLVNRVSMNYLDRNRNQMMAKYPKFQQYKQDFVVGEDIMEELLKMAGDEKIEFEEEEY
NRSKPLIMLQIKALIARDLYDMAQYFQIINDDNPSYQKALQIINNKETYNRLLGR

Sequences:

>Translated_535_residues
MKRIYLMKRIVLSLLIVLGVFTGATAQKANMDARKLQLALFAISNLYVDSTSETKLVEDAIVGMLDKLDPHSNYMDPEET
KEMTEPLQGNFDGIGIQFNMLTDTLYVIQVIPGGPSEKVGLMAGDRIIQVDDTLIAGVKMKTTDIMKKLRGPKGTEVRVK
VKRGKSPELMDFKIVRGKIPVYSLDAAYMADKNTGYIKLNRFAASSADEFREALEKLRKQGMKNLILDLQGNGGGYLNIA
IELADEFLDKNRLIVYTKGSKQPREEANSTARGQFQEGRLVVLVDESSASASEIVSGAIQDWDRGVIVGRRTFGKGLVQK
PIPLPDGSMIRLTVSRYYTPTGRCIQKPYENGKIEEYHHDLIDRYNRGELMSADSIHFPDSMKYNTLVTERTVYGGGGIM
PDVFIPVDTTRYTDYHRKLVASGLVNRVSMNYLDRNRNQMMAKYPKFQQYKQDFVVGEDIMEELLKMAGDEKIEFEEEEY
NRSKPLIMLQIKALIARDLYDMAQYFQIINDDNPSYQKALQIINNKETYNRLLGR
>Mature_535_residues
MKRIYLMKRIVLSLLIVLGVFTGATAQKANMDARKLQLALFAISNLYVDSTSETKLVEDAIVGMLDKLDPHSNYMDPEET
KEMTEPLQGNFDGIGIQFNMLTDTLYVIQVIPGGPSEKVGLMAGDRIIQVDDTLIAGVKMKTTDIMKKLRGPKGTEVRVK
VKRGKSPELMDFKIVRGKIPVYSLDAAYMADKNTGYIKLNRFAASSADEFREALEKLRKQGMKNLILDLQGNGGGYLNIA
IELADEFLDKNRLIVYTKGSKQPREEANSTARGQFQEGRLVVLVDESSASASEIVSGAIQDWDRGVIVGRRTFGKGLVQK
PIPLPDGSMIRLTVSRYYTPTGRCIQKPYENGKIEEYHHDLIDRYNRGELMSADSIHFPDSMKYNTLVTERTVYGGGGIM
PDVFIPVDTTRYTDYHRKLVASGLVNRVSMNYLDRNRNQMMAKYPKFQQYKQDFVVGEDIMEELLKMAGDEKIEFEEEEY
NRSKPLIMLQIKALIARDLYDMAQYFQIINDDNPSYQKALQIINNKETYNRLLGR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=329, Percent_Identity=28.8753799392097, Blast_Score=138, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 60645; Mature: 60645

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIYLMKRIVLSLLIVLGVFTGATAQKANMDARKLQLALFAISNLYVDSTSETKLVEDA
CCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHEEEHHHEEECCCCCHHHHHHH
IVGMLDKLDPHSNYMDPEETKEMTEPLQGNFDGIGIQFNMLTDTLYVIQVIPGGPSEKVG
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCEEEEEEEECCCCCCCEE
LMAGDRIIQVDDTLIAGVKMKTTDIMKKLRGPKGTEVRVKVKRGKSPELMDFKIVRGKIP
EEECCEEEEECCCEEECCEEHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCC
VYSLDAAYMADKNTGYIKLNRFAASSADEFREALEKLRKQGMKNLILDLQGNGGGYLNIA
EEECCHHHEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCEEEEE
IELADEFLDKNRLIVYTKGSKQPREEANSTARGQFQEGRLVVLVDESSASASEIVSGAIQ
EEEHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
DWDRGVIVGRRTFGKGLVQKPIPLPDGSMIRLTVSRYYTPTGRCIQKPYENGKIEEYHHD
HCCCCEEEECHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCHHHHHHH
LIDRYNRGELMSADSIHFPDSMKYNTLVTERTVYGGGGIMPDVFIPVDTTRYTDYHRKLV
HHHCCCCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHH
ASGLVNRVSMNYLDRNRNQMMAKYPKFQQYKQDFVVGEDIMEELLKMAGDEKIEFEEEEY
HHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECHHHC
NRSKPLIMLQIKALIARDLYDMAQYFQIINDDNPSYQKALQIINNKETYNRLLGR
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MKRIYLMKRIVLSLLIVLGVFTGATAQKANMDARKLQLALFAISNLYVDSTSETKLVEDA
CCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHEEEHHHEEECCCCCHHHHHHH
IVGMLDKLDPHSNYMDPEETKEMTEPLQGNFDGIGIQFNMLTDTLYVIQVIPGGPSEKVG
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCEEEEEEEECCCCCCCEE
LMAGDRIIQVDDTLIAGVKMKTTDIMKKLRGPKGTEVRVKVKRGKSPELMDFKIVRGKIP
EEECCEEEEECCCEEECCEEHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEECCCC
VYSLDAAYMADKNTGYIKLNRFAASSADEFREALEKLRKQGMKNLILDLQGNGGGYLNIA
EEECCHHHEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCEEEEE
IELADEFLDKNRLIVYTKGSKQPREEANSTARGQFQEGRLVVLVDESSASASEIVSGAIQ
EEEHHHHHCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
DWDRGVIVGRRTFGKGLVQKPIPLPDGSMIRLTVSRYYTPTGRCIQKPYENGKIEEYHHD
HCCCCEEEECHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHCCCCCCCHHHHHHH
LIDRYNRGELMSADSIHFPDSMKYNTLVTERTVYGGGGIMPDVFIPVDTTRYTDYHRKLV
HHHCCCCCCEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHH
ASGLVNRVSMNYLDRNRNQMMAKYPKFQQYKQDFVVGEDIMEELLKMAGDEKIEFEEEEY
HHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECHHHC
NRSKPLIMLQIKALIARDLYDMAQYFQIINDDNPSYQKALQIINNKETYNRLLGR
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]