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The map label for this gene is ydiB [H]

Identifier: 150009926

GI number: 150009926

Start: 4052023

End: 4052442

Strand: Direct

Name: ydiB [H]

Synonym: BDI_3343

Alternate gene names: 150009926

Gene position: 4052023-4052442 (Clockwise)

Preceding gene: 150009925

Following gene: 150009929

Centisome position: 84.22

GC content: 44.52

Gene sequence:

>420_bases
ATGAGCATACTGAAAATAGAAAGTTTGGATAAGATCCATGAGGCGGCTAAGGAGTTTATCGCCGGGATGGATGATCGTAC
GGTCTTTGCCTTCTATGGTCCGATGGGGGCCGGTAAGACTACCTTTATCAAGGCGATCTGTGAGGAATTGGGTGTGGAGG
ATGTGATCAACAGTCCCACATTCGCTATTATCAATGAGTACCGTAGCGATACGACGGGAGAATTGATTTATCATTTTGAT
TTTTACCGGATCAATAAATTGAGTGAGGCGGAGGATATCGGAACAGAGGATTATTTCTATAGCGGAGCTTTATGTTTTAT
CGAATGGCCGGAGAAAATAGATGAGTTGTTGCCCGGAGATGTGGTAGATGTAACGATCTCGGAGAATCCGGACGGTTCAC
GTACTGTAGAGGTTAAGTAA

Upstream 100 bases:

>100_bases
GTTTATTACGATGGAACCGAAATGATAATATGCCGAAAAGTTGCGTATATCATAAATATCACGAACTTTGCAGTCCATAT
AAACTGTAAACACGAATGCT

Downstream 100 bases:

>100_bases
GTCTATGGATCCTTCCGAATACTTTATCTTATCCTTGTTTATCGCTTTGGGATTGTTCTCAATCGTAGCGGCGATCTGTA
ATTTTGATTGGTACTTTAAA

Product: putative ATPase/GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSILKIESLDKIHEAAKEFIAGMDDRTVFAFYGPMGAGKTTFIKAICEELGVEDVINSPTFAIINEYRSDTTGELIYHFD
FYRINKLSEAEDIGTEDYFYSGALCFIEWPEKIDELLPGDVVDVTISENPDGSRTVEVK

Sequences:

>Translated_139_residues
MSILKIESLDKIHEAAKEFIAGMDDRTVFAFYGPMGAGKTTFIKAICEELGVEDVINSPTFAIINEYRSDTTGELIYHFD
FYRINKLSEAEDIGTEDYFYSGALCFIEWPEKIDELLPGDVVDVTISENPDGSRTVEVK
>Mature_138_residues
SILKIESLDKIHEAAKEFIAGMDDRTVFAFYGPMGAGKTTFIKAICEELGVEDVINSPTFAIINEYRSDTTGELIYHFDF
YRINKLSEAEDIGTEDYFYSGALCFIEWPEKIDELLPGDVVDVTISENPDGSRTVEVK

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=109, Percent_Identity=37.6146788990826, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 15634; Mature: 15502

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILKIESLDKIHEAAKEFIAGMDDRTVFAFYGPMGAGKTTFIKAICEELGVEDVINSPT
CCEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCCH
FAIINEYRSDTTGELIYHFDFYRINKLSEAEDIGTEDYFYSGALCFIEWPEKIDELLPGD
HEEHHHHCCCCCCEEEEEEEEEEECCCCCHHHCCCCCEEECCEEEEEECHHHHHHHCCCC
VVDVTISENPDGSRTVEVK
EEEEEECCCCCCCEEEEEC
>Mature Secondary Structure 
SILKIESLDKIHEAAKEFIAGMDDRTVFAFYGPMGAGKTTFIKAICEELGVEDVINSPT
CEEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHCCCH
FAIINEYRSDTTGELIYHFDFYRINKLSEAEDIGTEDYFYSGALCFIEWPEKIDELLPGD
HEEHHHHCCCCCCEEEEEEEEEEECCCCCHHHCCCCCEEECCEEEEEECHHHHHHHCCCC
VVDVTISENPDGSRTVEVK
EEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]