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The map label for this gene is zraR [H]

Identifier: 150009925

GI number: 150009925

Start: 4050397

End: 4051947

Strand: Direct

Name: zraR [H]

Synonym: BDI_3342

Alternate gene names: 150009925

Gene position: 4050397-4051947 (Clockwise)

Preceding gene: 150009924

Following gene: 150009926

Centisome position: 84.18

GC content: 44.68

Gene sequence:

>1551_bases
ATGGCAGCGAAGAAAGACAGAGTACTTTGGGCGGATGACGAGATTGATTTGTTGAAACCGCATATCTTGTTCTTGCAGGA
CAAAGGGTATGAGGTCGTTCCGGTGGTGAGCGGGCAAGACGCTATTGACTGCTGTAAGGAACAATCGTTTGATATTATTT
TTCTCGATGAGAATATGCCTGGCTTGACTGGGTTGGAGACGCTGTCGCATATCAAGGAGATCGCTCCGAATGTGCCGGTC
GTGATGGTGACTAAAAGTGAGGAGGAAAGTATCATGAATCAGGCGATCGGAAATAAGATCGCGGATTATTTGATCAAACC
GGTAAATCCCAACCAATTGCTTCTCTCTATCAAGAAGAATGTCCATAAGAACGTGATTATCTCCGAGACGACCACGGTGG
GTTATCAGCAGGAATTCGGTCGTATTGGTATGCAAATCAATGATTCCTTGACCACAGACGACTGGATGGAGGTCTATAAG
AAACTGGTGTACTGGGAACTGGAACTGGAAAGCAGCCAAGTGGCAATGACAGATATGCTCCGTATGCAGAAGGAAGAGGC
CAATAACGCTTTTGCCAAATTCGTGAAGAAGAATTATGTGGACTGGATACAGAATCCGGCCGATCGCCCGTTGATGAGCC
CCGACCTGTTTAAGAAGAAAGTCTTCCCAATGTTGGATAATGACGAGAAGGTTTTCTTTATATTGATCGATAATTTCCGG
CTGGATCAATGGCGGGTGGTAAAAGAATTGCTTACTGAGTATTTTACGTTTGACGAGAGCTTGTATTATAGCATACTGCC
AACCGCCACGCAATATGCCCGCAACTCCATATTCTCGGGCTTGATGCCTTCGCAAATAGAGCAGATGTTTCCGGATTTGT
GGGTGGATGAGGAGAGCGAGGAAGGTAAGAATTTGAATGAGGCTCCATTGATTCAAACCCAGATCGATCGGTTCCGTAAG
AAATATACCTTCTCATATAATAAAGTACACGATTCCCAATATGGAGAGAAATTGTTGGCTACGATCCCTTCTCTTACTCG
TAATCAACTGAATGTGATTGTGCTGAACTTCGTGGATATGCTTTCGCATGCTCGTACGGAGAGTAAGATGATCCGTGAGT
TGGCGCAAAGCGAGGCAGCCTATCGCAGCTTGACTAAATCATGGTTCCAGCACTCTTCTACGCTCGAGTTATTCAAACGA
ATCGCCGAGCGGGGAGGAAAAGTAATCGTTACGACCGATCATGGAACGATCCGGGTAACGAATCCGATCAAGGTGATAGG
TGATAAGAATACGAATACCAATCTACGCTATAAAGTAGGCAAGAACTTGAATTATAACCCGAAAGAGGTATTCGAGATCC
GGGATCCGGAAAAAGTAGGACTTCCCTCCCCGAATCTAAGCAGTAAGTATATTTTCGCCTACGGAGAGAATTTCTTCGCT
TATCCGAATAATTATAACTATTACGTATCCTATTATAAAAATACATTCCAGCACGGAGGAATCTCGATGGAGGAGATGTT
GGTGCCGTTTATTACGATGGAACCGAAATGA

Upstream 100 bases:

>100_bases
TTCTTAATATGTTAAAAATCATCCTATATACGAAACATCTCTATAATCCGTTGTTATATGAAGGATTATCGATATTTTTG
TAAATAAACTAGGTAAGCAT

Downstream 100 bases:

>100_bases
TAATATGCCGAAAAGTTGCGTATATCATAAATATCACGAACTTTGCAGTCCATATAAACTGTAAACACGAATGCTATGAG
CATACTGAAAATAGAAAGTT

Product: putative two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MAAKKDRVLWADDEIDLLKPHILFLQDKGYEVVPVVSGQDAIDCCKEQSFDIIFLDENMPGLTGLETLSHIKEIAPNVPV
VMVTKSEEESIMNQAIGNKIADYLIKPVNPNQLLLSIKKNVHKNVIISETTTVGYQQEFGRIGMQINDSLTTDDWMEVYK
KLVYWELELESSQVAMTDMLRMQKEEANNAFAKFVKKNYVDWIQNPADRPLMSPDLFKKKVFPMLDNDEKVFFILIDNFR
LDQWRVVKELLTEYFTFDESLYYSILPTATQYARNSIFSGLMPSQIEQMFPDLWVDEESEEGKNLNEAPLIQTQIDRFRK
KYTFSYNKVHDSQYGEKLLATIPSLTRNQLNVIVLNFVDMLSHARTESKMIRELAQSEAAYRSLTKSWFQHSSTLELFKR
IAERGGKVIVTTDHGTIRVTNPIKVIGDKNTNTNLRYKVGKNLNYNPKEVFEIRDPEKVGLPSPNLSSKYIFAYGENFFA
YPNNYNYYVSYYKNTFQHGGISMEEMLVPFITMEPK

Sequences:

>Translated_516_residues
MAAKKDRVLWADDEIDLLKPHILFLQDKGYEVVPVVSGQDAIDCCKEQSFDIIFLDENMPGLTGLETLSHIKEIAPNVPV
VMVTKSEEESIMNQAIGNKIADYLIKPVNPNQLLLSIKKNVHKNVIISETTTVGYQQEFGRIGMQINDSLTTDDWMEVYK
KLVYWELELESSQVAMTDMLRMQKEEANNAFAKFVKKNYVDWIQNPADRPLMSPDLFKKKVFPMLDNDEKVFFILIDNFR
LDQWRVVKELLTEYFTFDESLYYSILPTATQYARNSIFSGLMPSQIEQMFPDLWVDEESEEGKNLNEAPLIQTQIDRFRK
KYTFSYNKVHDSQYGEKLLATIPSLTRNQLNVIVLNFVDMLSHARTESKMIRELAQSEAAYRSLTKSWFQHSSTLELFKR
IAERGGKVIVTTDHGTIRVTNPIKVIGDKNTNTNLRYKVGKNLNYNPKEVFEIRDPEKVGLPSPNLSSKYIFAYGENFFA
YPNNYNYYVSYYKNTFQHGGISMEEMLVPFITMEPK
>Mature_515_residues
AAKKDRVLWADDEIDLLKPHILFLQDKGYEVVPVVSGQDAIDCCKEQSFDIIFLDENMPGLTGLETLSHIKEIAPNVPVV
MVTKSEEESIMNQAIGNKIADYLIKPVNPNQLLLSIKKNVHKNVIISETTTVGYQQEFGRIGMQINDSLTTDDWMEVYKK
LVYWELELESSQVAMTDMLRMQKEEANNAFAKFVKKNYVDWIQNPADRPLMSPDLFKKKVFPMLDNDEKVFFILIDNFRL
DQWRVVKELLTEYFTFDESLYYSILPTATQYARNSIFSGLMPSQIEQMFPDLWVDEESEEGKNLNEAPLIQTQIDRFRKK
YTFSYNKVHDSQYGEKLLATIPSLTRNQLNVIVLNFVDMLSHARTESKMIRELAQSEAAYRSLTKSWFQHSSTLELFKRI
AERGGKVIVTTDHGTIRVTNPIKVIGDKNTNTNLRYKVGKNLNYNPKEVFEIRDPEKVGLPSPNLSSKYIFAYGENFFAY
PNNYNYYVSYYKNTFQHGGISMEEMLVPFITMEPK

Specific function: Member of the two-component regulatory system zraS/zraR. When activated by zraS it acts in conjunction with sigma-54 to regulate the expression of zraP. Positively autoregulates the expression of the zraSR operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=137, Percent_Identity=32.1167883211679, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 59798; Mature: 59667

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKKDRVLWADDEIDLLKPHILFLQDKGYEVVPVVSGQDAIDCCKEQSFDIIFLDENMP
CCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEECCCCC
GLTGLETLSHIKEIAPNVPVVMVTKSEEESIMNQAIGNKIADYLIKPVNPNQLLLSIKKN
CCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
VHKNVIISETTTVGYQQEFGRIGMQINDSLTTDDWMEVYKKLVYWELELESSQVAMTDML
CCCCEEEECCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHHEEEEEEECCCHHHHHHHH
RMQKEEANNAFAKFVKKNYVDWIQNPADRPLMSPDLFKKKVFPMLDNDEKVFFILIDNFR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCC
LDQWRVVKELLTEYFTFDESLYYSILPTATQYARNSIFSGLMPSQIEQMFPDLWVDEESE
CHHHHHHHHHHHHHHCCCCHHHEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
EGKNLNEAPLIQTQIDRFRKKYTFSYNKVHDSQYGEKLLATIPSLTRNQLNVIVLNFVDM
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCHHEEEHHHHHH
LSHARTESKMIRELAQSEAAYRSLTKSWFQHSSTLELFKRIAERGGKVIVTTDHGTIRVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCEEEEC
NPIKVIGDKNTNTNLRYKVGKNLNYNPKEVFEIRDPEKVGLPSPNLSSKYIFAYGENFFA
CCEEEEECCCCCCCEEEEECCCCCCCHHHHEEECCCCCCCCCCCCCCCCEEEEECCCEEE
YPNNYNYYVSYYKNTFQHGGISMEEMLVPFITMEPK
CCCCCCEEEEEEHHHHHCCCCCHHHHHCCCEEECCC
>Mature Secondary Structure 
AAKKDRVLWADDEIDLLKPHILFLQDKGYEVVPVVSGQDAIDCCKEQSFDIIFLDENMP
CCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEECCCCC
GLTGLETLSHIKEIAPNVPVVMVTKSEEESIMNQAIGNKIADYLIKPVNPNQLLLSIKKN
CCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
VHKNVIISETTTVGYQQEFGRIGMQINDSLTTDDWMEVYKKLVYWELELESSQVAMTDML
CCCCEEEECCCCCCHHHHHCCCCCEECCCCCCHHHHHHHHHHEEEEEEECCCHHHHHHHH
RMQKEEANNAFAKFVKKNYVDWIQNPADRPLMSPDLFKKKVFPMLDNDEKVFFILIDNFR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCC
LDQWRVVKELLTEYFTFDESLYYSILPTATQYARNSIFSGLMPSQIEQMFPDLWVDEESE
CHHHHHHHHHHHHHHCCCCHHHEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC
EGKNLNEAPLIQTQIDRFRKKYTFSYNKVHDSQYGEKLLATIPSLTRNQLNVIVLNFVDM
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCHHEEEHHHHHH
LSHARTESKMIRELAQSEAAYRSLTKSWFQHSSTLELFKRIAERGGKVIVTTDHGTIRVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCEEEEC
NPIKVIGDKNTNTNLRYKVGKNLNYNPKEVFEIRDPEKVGLPSPNLSSKYIFAYGENFFA
CCEEEEECCCCCCCEEEEECCCCCCCHHHHEEECCCCCCCCCCCCCCCCEEEEECCCEEE
YPNNYNYYVSYYKNTFQHGGISMEEMLVPFITMEPK
CCCCCCEEEEEEHHHHHCCCCCHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]