Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150009851

Identifier: 150009851

GI number: 150009851

Start: 3948050

End: 3949279

Strand: Direct

Name: 150009851

Synonym: BDI_3267

Alternate gene names: NA

Gene position: 3948050-3949279 (Clockwise)

Preceding gene: 150009848

Following gene: 150009852

Centisome position: 82.06

GC content: 49.11

Gene sequence:

>1230_bases
ATGAGACGGATTACCCTGTTGCTCGTGGGGATGCTAGCCTTATTTTCTACGACAGCGCAAAGAAAAAACTTCACTTACAA
ATTCTACGGCTTCGTCCGTGGAGATCTTTTCTACAATTCCCGGGCTAATATGGCTCCGATCGATGGGAACTTTTATCTCT
ATCCTTTGGATAAGAGTTTTGATGCGGATGGCAAGGATTTGAACGCCACGCCGAATGGCAGTTTCTATACGTTCACTTCC
CGCTTGGGCTTGGACGTGACGGGTCCCGATATCGGCAAGGCTCGTTCCTCCGCTAAGATAGAGACGGACTTTGGCGGTTT
TTCCGGTAGTAATACGATGTTACGTATCCGGCAGGCATACGTAAACTTGGATTGGGGAAAATCGGCGGTATTAGTAGGGA
TCACGTGGCATCCCTTGTTTGGCGCCGTGATGCCGGATGTCTTGAATCTTTCCACCGGAGCGCCGTTCCAGCCTTTCAAC
CGTAGCCCGCAGATCCGTTACCAGTATAAGGCGAATAGCCGGGTACAACTGACGGCTTCCGTGTTGTGGCAATTACAATA
CCTTTCCAGCGGACCGAAAGGAATGAGCGAGGATTATATCAAGAATAGTTGCATTCCGGAGATGTTCGTGGGGGCGGACT
TTACCCCCGCGGATGGCTGGTTGATGGGTCTCGGCGCTCATATGATCTCCTTGAAGCCCCGTACTTCCACGGAATGGAAG
GAGCAAACTTTTAAGGTGAACGAGCGAATGACGGCCTTCTCTTACGAGGCACATTTGAAGTATAGCGGAAGAAACTATAC
CTTTGCGGCGAAAACCTTGATGGCCTCTGCCTTGGATCATACCGCTTTATTGGGCGGTTACGGGGTGAGCTCGGTGGACT
CCCGTACGGGCGAACAGGGATATACGCCTTTTCGCCATTCTACGACATGGGTGAATTTCGCCTACGGAACGAAATGGAGA
CCGGGAGTTTTCGTCGGATATACGAAGAATTTGGGAACCGGGAAGTCCTTGGTCTCAGCGGATAAGGTGTATGGTATGGG
ATTGGATATCGATCAATTAATAACCGTCAGCTTAAACGTATCGTATAATTTACCGCATTGGAAGTTCGGTTTCGAGTATT
GTCCGGCGACAGCTTATTATGGCACGACCGACTTAGAGAGCGGACGTATCGAGCAAACACATGCGATAACGAATCATCGT
ATATTAGGTTTGATGATGTATTATTTTTAA

Upstream 100 bases:

>100_bases
AAGCAAAGGAACAAATAATATTTCGTTTCTTCAAATTGAATCCATAAAAATATATACATTCGCGGCTTATAAGGTAAGAA
AAATAACAAACTGAATTATA

Downstream 100 bases:

>100_bases
AGATAGATTGACCGGAATGGAAATGAAACGCAACTTGCTTCTTTTGATCGGCCTATGTATGGCGGTATGCGTACAGGCGC
AAAAGAAAAACTTCTCTTAC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSFDADGKDLNATPNGSFYTFTS
RLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAYVNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFN
RSPQIRYQYKANSRVQLTASVLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK
EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQGYTPFRHSTTWVNFAYGTKWR
PGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNVSYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHR
ILGLMMYYF

Sequences:

>Translated_409_residues
MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSFDADGKDLNATPNGSFYTFTS
RLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAYVNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFN
RSPQIRYQYKANSRVQLTASVLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK
EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQGYTPFRHSTTWVNFAYGTKWR
PGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNVSYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHR
ILGLMMYYF
>Mature_409_residues
MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSFDADGKDLNATPNGSFYTFTS
RLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAYVNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFN
RSPQIRYQYKANSRVQLTASVLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK
EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQGYTPFRHSTTWVNFAYGTKWR
PGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNVSYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHR
ILGLMMYYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45763; Mature: 45763

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSF
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCEECCCEEEEECCCCC
DADGKDLNATPNGSFYTFTSRLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAY
CCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEE
VNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFNRSPQIRYQYKANSRVQLTAS
EECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHH
VLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK
HHHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCHH
EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQG
HHHEECCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC
YTPFRHSTTWVNFAYGTKWRPGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNV
CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCCCHHHEEEEEEEE
SYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHRILGLMMYYF
EECCCCCCCCCEECCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MRRITLLLVGMLALFSTTAQRKNFTYKFYGFVRGDLFYNSRANMAPIDGNFYLYPLDKSF
CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCEECCCEEEEECCCCC
DADGKDLNATPNGSFYTFTSRLGLDVTGPDIGKARSSAKIETDFGGFSGSNTMLRIRQAY
CCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEE
VNLDWGKSAVLVGITWHPLFGAVMPDVLNLSTGAPFQPFNRSPQIRYQYKANSRVQLTAS
EECCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHH
VLWQLQYLSSGPKGMSEDYIKNSCIPEMFVGADFTPADGWLMGLGAHMISLKPRTSTEWK
HHHHHHHHCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCHH
EQTFKVNERMTAFSYEAHLKYSGRNYTFAAKTLMASALDHTALLGGYGVSSVDSRTGEQG
HHHEECCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC
YTPFRHSTTWVNFAYGTKWRPGVFVGYTKNLGTGKSLVSADKVYGMGLDIDQLITVSLNV
CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCCCHHHEEEEEEEE
SYNLPHWKFGFEYCPATAYYGTTDLESGRIEQTHAITNHRILGLMMYYF
EECCCCCCCCCEECCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA