| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150009814
Identifier: 150009814
GI number: 150009814
Start: 3911970
End: 3913187
Strand: Reverse
Name: 150009814
Synonym: BDI_3230
Alternate gene names: NA
Gene position: 3913187-3911970 (Counterclockwise)
Preceding gene: 150009815
Following gene: 150009813
Centisome position: 81.33
GC content: 36.62
Gene sequence:
>1218_bases ATGATTAAACTACTCTTCATCATTTCGCTACTTGCAATTTATTTGTGGTGTGGCCAGACGGATAAAGGACGGAAAGTCTA TTTCTTGACAGCAATCGTGTTGTCATTTATTCGAGTACTTAAAGTTCCTGTTTTAGGAGACATAATGCCTGCGATGCCCA TGTTCGGAATCATGCTTGTAACAGAAACATACAAGTCTCTGTCGGCATTAAAAGGGTGGTATCTGTATTTGTTGGCAGTT ATAGTTTCGTTTCTTATTGGTCTTTTGTCAACTGATATATTGCGAGCTTTTCCATGGATTGGCCCAGTGTGGGACGTAAT GGCCATAGCAACCTTGACTCCTCTTTATATAAAAACATACGAGGATCTTCAAAGATTTACACGATGCATACTCACAGTAT CATTCATTTATTCATTCACTACAATACTGGCTTTTTGGGGTTTTTATGACGGTGTTGTTTTATTGTCAACAACGGATTCT GATATCATTAATCAATCCCGTATTTATGGAATATCATATTCTAATTTGACACAGACATTGTCTGTCATTACTATTTGCCT ATTACCGCGTGCAAACATTAATAAGAAAGTAGTTTATTTACTGATTGTGATTTTCTCATACGCAGCTTTCGTGACGCTGA AGAGAATGTCGTTTATCGCCATTATATTATCTTTATTGTACTTTGTATATGTAGAATACAAAGAACGACAATATAAAAGT GTCTTGATAATTGCGGTATTGACGATATTAGCATCTGGTAGTGATTTATTGATGTTTATACTCGACAGGTTTGATATATT CTCCAACACTACCGCTATGACGATTACAGACCATTCATCTCAAACCAGAGTAGACCGAATCAACTTTGCCATGGATAGCT TTATCCGTTCTCCGTTATGGGGAAATGGAGCAGGATATGCCATATATATACACAACGGTCTTATGGAAATCTTGGCAAAT TGCGGATTGTTGGGAATTGTATTTATTGTCGCACAGTATTTAAAGCCGTTGAGGGGTATTTTTTCAAGGAATCCTTGGAG CATGTGTACCTTGATATTTCTTATTACTGGCTTCTCGCTTGAGGCTGCAATTTCCCGACCGGAGTTAATGTGTTTTCTCG GTTTCTTTATTGGGGGATATACTGTATCTGAAAATTTACATATAGATTATACTAAACAGGATGAACAACAAATTAAGTGT GATTATTCCGACATTTAA
Upstream 100 bases:
>100_bases GAGGAATATCTCAAACATTTCACGATAAAAAGAATGGTTGAGAATTATTTGCTTTTGCAAAGCAACTTCAATGGGTGCTG AATACAGATAGATTTGCAGA
Downstream 100 bases:
>100_bases TGTTGAAATTTATTTAGAGGAACTGCTTTGTTGCATTGAGAACTGGGCAGATGAGATTATCATCTGTGATTCATTCAGCA CGGACAAGACTTTGGAAATA
Product: putative O-antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MIKLLFIISLLAIYLWCGQTDKGRKVYFLTAIVLSFIRVLKVPVLGDIMPAMPMFGIMLVTETYKSLSALKGWYLYLLAV IVSFLIGLLSTDILRAFPWIGPVWDVMAIATLTPLYIKTYEDLQRFTRCILTVSFIYSFTTILAFWGFYDGVVLLSTTDS DIINQSRIYGISYSNLTQTLSVITICLLPRANINKKVVYLLIVIFSYAAFVTLKRMSFIAIILSLLYFVYVEYKERQYKS VLIIAVLTILASGSDLLMFILDRFDIFSNTTAMTITDHSSQTRVDRINFAMDSFIRSPLWGNGAGYAIYIHNGLMEILAN CGLLGIVFIVAQYLKPLRGIFSRNPWSMCTLIFLITGFSLEAAISRPELMCFLGFFIGGYTVSENLHIDYTKQDEQQIKC DYSDI
Sequences:
>Translated_405_residues MIKLLFIISLLAIYLWCGQTDKGRKVYFLTAIVLSFIRVLKVPVLGDIMPAMPMFGIMLVTETYKSLSALKGWYLYLLAV IVSFLIGLLSTDILRAFPWIGPVWDVMAIATLTPLYIKTYEDLQRFTRCILTVSFIYSFTTILAFWGFYDGVVLLSTTDS DIINQSRIYGISYSNLTQTLSVITICLLPRANINKKVVYLLIVIFSYAAFVTLKRMSFIAIILSLLYFVYVEYKERQYKS VLIIAVLTILASGSDLLMFILDRFDIFSNTTAMTITDHSSQTRVDRINFAMDSFIRSPLWGNGAGYAIYIHNGLMEILAN CGLLGIVFIVAQYLKPLRGIFSRNPWSMCTLIFLITGFSLEAAISRPELMCFLGFFIGGYTVSENLHIDYTKQDEQQIKC DYSDI >Mature_405_residues MIKLLFIISLLAIYLWCGQTDKGRKVYFLTAIVLSFIRVLKVPVLGDIMPAMPMFGIMLVTETYKSLSALKGWYLYLLAV IVSFLIGLLSTDILRAFPWIGPVWDVMAIATLTPLYIKTYEDLQRFTRCILTVSFIYSFTTILAFWGFYDGVVLLSTTDS DIINQSRIYGISYSNLTQTLSVITICLLPRANINKKVVYLLIVIFSYAAFVTLKRMSFIAIILSLLYFVYVEYKERQYKS VLIIAVLTILASGSDLLMFILDRFDIFSNTTAMTITDHSSQTRVDRINFAMDSFIRSPLWGNGAGYAIYIHNGLMEILAN CGLLGIVFIVAQYLKPLRGIFSRNPWSMCTLIFLITGFSLEAAISRPELMCFLGFFIGGYTVSENLHIDYTKQDEQQIKC DYSDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46027; Mature: 46027
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLLFIISLLAIYLWCGQTDKGRKVYFLTAIVLSFIRVLKVPVLGDIMPAMPMFGIMLV CHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TETYKSLSALKGWYLYLLAVIVSFLIGLLSTDILRAFPWIGPVWDVMAIATLTPLYIKTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EDLQRFTRCILTVSFIYSFTTILAFWGFYDGVVLLSTTDSDIINQSRIYGISYSNLTQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCHHEEEEEHHHHHHHH SVITICLLPRANINKKVVYLLIVIFSYAAFVTLKRMSFIAIILSLLYFVYVEYKERQYKS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIIAVLTILASGSDLLMFILDRFDIFSNTTAMTITDHSSQTRVDRINFAMDSFIRSPLW HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC GNGAGYAIYIHNGLMEILANCGLLGIVFIVAQYLKPLRGIFSRNPWSMCTLIFLITGFSL CCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH EAAISRPELMCFLGFFIGGYTVSENLHIDYTKQDEQQIKCDYSDI HHHCCCHHHHHHHHHHHCCEEECCCEEEEECCCCCHHHCCCCCCC >Mature Secondary Structure MIKLLFIISLLAIYLWCGQTDKGRKVYFLTAIVLSFIRVLKVPVLGDIMPAMPMFGIMLV CHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TETYKSLSALKGWYLYLLAVIVSFLIGLLSTDILRAFPWIGPVWDVMAIATLTPLYIKTY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EDLQRFTRCILTVSFIYSFTTILAFWGFYDGVVLLSTTDSDIINQSRIYGISYSNLTQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCHHEEEEEHHHHHHHH SVITICLLPRANINKKVVYLLIVIFSYAAFVTLKRMSFIAIILSLLYFVYVEYKERQYKS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIIAVLTILASGSDLLMFILDRFDIFSNTTAMTITDHSSQTRVDRINFAMDSFIRSPLW HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC GNGAGYAIYIHNGLMEILANCGLLGIVFIVAQYLKPLRGIFSRNPWSMCTLIFLITGFSL CCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCH EAAISRPELMCFLGFFIGGYTVSENLHIDYTKQDEQQIKCDYSDI HHHCCCHHHHHHHHHHHCCEEECCCEEEEECCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA