| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009805
Identifier: 150009805
GI number: 150009805
Start: 3902025
End: 3903224
Strand: Reverse
Name: 150009805
Synonym: BDI_3221
Alternate gene names: NA
Gene position: 3903224-3902025 (Counterclockwise)
Preceding gene: 150009808
Following gene: 150009804
Centisome position: 81.12
GC content: 40.83
Gene sequence:
>1200_bases ATGCGACAAATAATGAAACTATTTATCACATCCTTTCTTTTTATCCTATTCTCAGGATGTACAAAGGATGTATATGATCC TTCCGATAAAATTCCGGGAGAAGGTACTAATCCATTCTCAAAGGTAACAATTTCCTCTAATTTCGATTGGTCGATGATAC AAATATCCCACCTTACCGTACAATCTTTCGACCCCTATGATGGCACCTATAATTATCTGGTAGAAGTATTTGATAAAAGT CCGGAAGATCAAGATGCGAATCTTCTCGCTACCGGGGTTTGCTCAAAGAAAACGCTTTTCGATAAGAAAATTATCTATCC AAAGGGAGAGTCGGATCAAGTTTACATAAAATTGACGACCCCTACCGGATATCAAGTTACCGCTCCTGTCACCTTAACAC CGGGTAATGATAATGTCTGTGCTTTCGATTCGTTAGCCGTATCGCAGGAAACAACCGCTACTCCGGTTAGCCGTACCCCG ACCCGAAGCGTGTCTTCCACCTATACATTTATAATAGAAGACTCTTTCCCTAATTACGGAGATTATGATTTTAATGATGC CGTGATAAAAGTCCAGATGGAAACTTCCATGAAAGACGATTATGTACAATTCGCCAATATAAAACTGACTTTCCGTGCAT TAGGCGGAACTAAGCGGGCCGGAGCTTTCATCCATCTCCCCGGCATAAAGTCCAAAGACATCCAAAAAGCCGAGTTAAAT GGCTGGACCACGACTCCAGAATCGGAAACCGAGACTCCGGTTTATGCCCTATCGGATGATATACATGGATTATTCTCTTT TCATGAAATGATTAATACAGATAATGACCTTCCATATAGGGGAAAGCAAGAACGTTTGATCACCTTTTCGTTCGCAGCCG GTGCCTTAAAAGATTTGACCATTGATGACATCGATCTTTTCACGACCGTATTAAAGCGGGAAGGAGAGGTCTTACGCACG GAAATCCACCAACGTAATTATAGCTATACCCCCAAAGGGGTCAGATACCGTTATTACTCAAATGATAATTGCATATGGGC CTTAATGATACCGGATGATTTCAAATACCCTGTGGAACATGCTTTTATTGGTGATGCCTATCCGGATCTATTGAAATGGG TAAGTGGAGATAGCAAACATGTACAATGGTATAAAAGTAAGAATACAGTTGATAAGTGGATTTATACCCGAGAACAATAA
Upstream 100 bases:
>100_bases AGAAAACTTTAGACACCGCTTTTTTAATAAATTAAAAATCTATTGATTAATAAATATATTCTTACTTTTGCAAAGGCAGA ATGCAAATTGATTTCTTGAC
Downstream 100 bases:
>100_bases CAACCTAAAATCCTCCGTAAAATGAAAACGACCGCCATCTTATTTCTTGCCTATCTGGCTTTATGCGTTCAGTGCTCAGT GCCGGAAAACAAGAGCACGA
Product: putative outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRQIMKLFITSFLFILFSGCTKDVYDPSDKIPGEGTNPFSKVTISSNFDWSMIQISHLTVQSFDPYDGTYNYLVEVFDKS PEDQDANLLATGVCSKKTLFDKKIIYPKGESDQVYIKLTTPTGYQVTAPVTLTPGNDNVCAFDSLAVSQETTATPVSRTP TRSVSSTYTFIIEDSFPNYGDYDFNDAVIKVQMETSMKDDYVQFANIKLTFRALGGTKRAGAFIHLPGIKSKDIQKAELN GWTTTPESETETPVYALSDDIHGLFSFHEMINTDNDLPYRGKQERLITFSFAAGALKDLTIDDIDLFTTVLKREGEVLRT EIHQRNYSYTPKGVRYRYYSNDNCIWALMIPDDFKYPVEHAFIGDAYPDLLKWVSGDSKHVQWYKSKNTVDKWIYTREQ
Sequences:
>Translated_399_residues MRQIMKLFITSFLFILFSGCTKDVYDPSDKIPGEGTNPFSKVTISSNFDWSMIQISHLTVQSFDPYDGTYNYLVEVFDKS PEDQDANLLATGVCSKKTLFDKKIIYPKGESDQVYIKLTTPTGYQVTAPVTLTPGNDNVCAFDSLAVSQETTATPVSRTP TRSVSSTYTFIIEDSFPNYGDYDFNDAVIKVQMETSMKDDYVQFANIKLTFRALGGTKRAGAFIHLPGIKSKDIQKAELN GWTTTPESETETPVYALSDDIHGLFSFHEMINTDNDLPYRGKQERLITFSFAAGALKDLTIDDIDLFTTVLKREGEVLRT EIHQRNYSYTPKGVRYRYYSNDNCIWALMIPDDFKYPVEHAFIGDAYPDLLKWVSGDSKHVQWYKSKNTVDKWIYTREQ >Mature_399_residues MRQIMKLFITSFLFILFSGCTKDVYDPSDKIPGEGTNPFSKVTISSNFDWSMIQISHLTVQSFDPYDGTYNYLVEVFDKS PEDQDANLLATGVCSKKTLFDKKIIYPKGESDQVYIKLTTPTGYQVTAPVTLTPGNDNVCAFDSLAVSQETTATPVSRTP TRSVSSTYTFIIEDSFPNYGDYDFNDAVIKVQMETSMKDDYVQFANIKLTFRALGGTKRAGAFIHLPGIKSKDIQKAELN GWTTTPESETETPVYALSDDIHGLFSFHEMINTDNDLPYRGKQERLITFSFAAGALKDLTIDDIDLFTTVLKREGEVLRT EIHQRNYSYTPKGVRYRYYSNDNCIWALMIPDDFKYPVEHAFIGDAYPDLLKWVSGDSKHVQWYKSKNTVDKWIYTREQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45427; Mature: 45427
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIMKLFITSFLFILFSGCTKDVYDPSDKIPGEGTNPFSKVTISSNFDWSMIQISHLTV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEE QSFDPYDGTYNYLVEVFDKSPEDQDANLLATGVCSKKTLFDKKIIYPKGESDQVYIKLTT ECCCCCCCHHHHHHEEECCCCCCCCCCEEEECCCCCCHHCCCEEECCCCCCCEEEEEEEC PTGYQVTAPVTLTPGNDNVCAFDSLAVSQETTATPVSRTPTRSVSSTYTFIIEDSFPNYG CCCEEEEEEEEEECCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC DYDFNDAVIKVQMETSMKDDYVQFANIKLTFRALGGTKRAGAFIHLPGIKSKDIQKAELN CCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCEEECC GWTTTPESETETPVYALSDDIHGLFSFHEMINTDNDLPYRGKQERLITFSFAAGALKDLT CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC IDDIDLFTTVLKREGEVLRTEIHQRNYSYTPKGVRYRYYSNDNCIWALMIPDDFKYPVEH CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHH AFIGDAYPDLLKWVSGDSKHVQWYKSKNTVDKWIYTREQ EEECCCHHHHHHHHCCCCCEEEEEECCCCHHHCEEECCC >Mature Secondary Structure MRQIMKLFITSFLFILFSGCTKDVYDPSDKIPGEGTNPFSKVTISSNFDWSMIQISHLTV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEE QSFDPYDGTYNYLVEVFDKSPEDQDANLLATGVCSKKTLFDKKIIYPKGESDQVYIKLTT ECCCCCCCHHHHHHEEECCCCCCCCCCEEEECCCCCCHHCCCEEECCCCCCCEEEEEEEC PTGYQVTAPVTLTPGNDNVCAFDSLAVSQETTATPVSRTPTRSVSSTYTFIIEDSFPNYG CCCEEEEEEEEEECCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC DYDFNDAVIKVQMETSMKDDYVQFANIKLTFRALGGTKRAGAFIHLPGIKSKDIQKAELN CCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCEEECC GWTTTPESETETPVYALSDDIHGLFSFHEMINTDNDLPYRGKQERLITFSFAAGALKDLT CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC IDDIDLFTTVLKREGEVLRTEIHQRNYSYTPKGVRYRYYSNDNCIWALMIPDDFKYPVEH CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHH AFIGDAYPDLLKWVSGDSKHVQWYKSKNTVDKWIYTREQ EEECCCHHHHHHHHCCCCCEEEEEECCCCHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA