| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009796
Identifier: 150009796
GI number: 150009796
Start: 3890002
End: 3891225
Strand: Direct
Name: 150009796
Synonym: BDI_3212
Alternate gene names: NA
Gene position: 3890002-3891225 (Clockwise)
Preceding gene: 150009795
Following gene: 150009797
Centisome position: 80.85
GC content: 44.36
Gene sequence:
>1224_bases ATGAAAAGTGTAAAGTTAGCCTCTATCTTGTTTTATTTAAATAGTGTTTTTGTCGTTTCTTGTTTCGTGTCATGCGGTTC TTCGCCAACGGAAGCGTCCTCTCTTTTAACTGCGGATATAAGAGGGGGGATGGATAAACCGGGGCTATTGGAATTAGGCG ATGAGATCAAGGGGGTTACTTTTGTCCCTTTAGAGGTGACCACGGATGATGCCTCGTTGATAGACGGAGTTTATGATTAT GCCGTGACAGATCGATATATCTATGTGTTTCCCGTAAAAGAGCCCCGTATCGTCCTGTTCGATCGGCAAGGGCGTTTTAT CCGGACGTTGGTAAAAGAAGGGCAGGGGCCGGGTGAATTTAGCGGTATTCTGCCATGTATCCAAGTGGACGAACGTAATG ATCGCCTTTTTTTATTTAGTAATAATCGAGTTTGGGAATATACGTTAGAAGGTGAATTTATCGGACAATCCACCCATGAG TATTCGGTAATCTATATGCGTCATATCGGAAAGGATCGTTTCGCCGCCATATCATTCCCTTTTCAGCCTTTCAACGGAGG GGGATTCGGATTGGGCCTATTTTCGAGGAAAGGGGATACGATAGCGATCAAGAATGATTTTTATTCCTTTTTATTACCCC ATGAGAAGAGCGGGTTCACGACAAGTATCGCCTCCGCTTATTCTGATGCGCAAAACTCCGTGTTGTTTAAGACCGGTAGT AATGATACGGTCTTCTGTATCTCGGCGGATCGAATAAGTGCGGCTTGTGTCCTTGATCTGAAAAACTCGGATGCGGAAGT GATTCGTTCGTTGGATGTTACGGACATGAGTAATTTGCGAATTGAAAAAAAGGACCCCAAGGATATCTTTGTGCAAGATA TGATTGAGTTTCCGGCACATTATTATTTCCGTTTATTGTATAACCAAGGCTATTATATCGCCTCTGTGGATAAAAAGACG GGAAAGACACTCGTGGAAAAATGCGAGATGCCGGGGTCTATCTATGAACTGGCGGACGCGAACCTTCAACATGGCATGCA GGGTACGAGAAGTTATCGGAATTTCCCGGTCTGGGGGAGGGTCATAAAAGATGAGTTGGTACAAGTAGTGACCCCGTATG AGCTAAACTTATATAAGTCGCTTCACTCGATCACGATTCCGCAGGAGTTGGACTTAAAAGGAGAGGAGGGCAATCCGGTT TTTGTGTTCTATTCGCTTATTTGA
Upstream 100 bases:
>100_bases ATTTATAGCGGTCTTGGCAGGTTTGTTCTCATTTTTGTTCTCATTTATTATGTGATTTGTGAGATATACGGGATATTTTT GGAGGCAAAAAAGCATGGTT
Downstream 100 bases:
>100_bases CTTCGATATGTATCGCTCGGTTGTACTTCTTGTAATAATCTAGCGATAGAAGCTATGTTCTTTTATCTTTTCTATGTCTT TGATGGCTATTAGTGTTATT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKSVKLASILFYLNSVFVVSCFVSCGSSPTEASSLLTADIRGGMDKPGLLELGDEIKGVTFVPLEVTTDDASLIDGVYDY AVTDRYIYVFPVKEPRIVLFDRQGRFIRTLVKEGQGPGEFSGILPCIQVDERNDRLFLFSNNRVWEYTLEGEFIGQSTHE YSVIYMRHIGKDRFAAISFPFQPFNGGGFGLGLFSRKGDTIAIKNDFYSFLLPHEKSGFTTSIASAYSDAQNSVLFKTGS NDTVFCISADRISAACVLDLKNSDAEVIRSLDVTDMSNLRIEKKDPKDIFVQDMIEFPAHYYFRLLYNQGYYIASVDKKT GKTLVEKCEMPGSIYELADANLQHGMQGTRSYRNFPVWGRVIKDELVQVVTPYELNLYKSLHSITIPQELDLKGEEGNPV FVFYSLI
Sequences:
>Translated_407_residues MKSVKLASILFYLNSVFVVSCFVSCGSSPTEASSLLTADIRGGMDKPGLLELGDEIKGVTFVPLEVTTDDASLIDGVYDY AVTDRYIYVFPVKEPRIVLFDRQGRFIRTLVKEGQGPGEFSGILPCIQVDERNDRLFLFSNNRVWEYTLEGEFIGQSTHE YSVIYMRHIGKDRFAAISFPFQPFNGGGFGLGLFSRKGDTIAIKNDFYSFLLPHEKSGFTTSIASAYSDAQNSVLFKTGS NDTVFCISADRISAACVLDLKNSDAEVIRSLDVTDMSNLRIEKKDPKDIFVQDMIEFPAHYYFRLLYNQGYYIASVDKKT GKTLVEKCEMPGSIYELADANLQHGMQGTRSYRNFPVWGRVIKDELVQVVTPYELNLYKSLHSITIPQELDLKGEEGNPV FVFYSLI >Mature_407_residues MKSVKLASILFYLNSVFVVSCFVSCGSSPTEASSLLTADIRGGMDKPGLLELGDEIKGVTFVPLEVTTDDASLIDGVYDY AVTDRYIYVFPVKEPRIVLFDRQGRFIRTLVKEGQGPGEFSGILPCIQVDERNDRLFLFSNNRVWEYTLEGEFIGQSTHE YSVIYMRHIGKDRFAAISFPFQPFNGGGFGLGLFSRKGDTIAIKNDFYSFLLPHEKSGFTTSIASAYSDAQNSVLFKTGS NDTVFCISADRISAACVLDLKNSDAEVIRSLDVTDMSNLRIEKKDPKDIFVQDMIEFPAHYYFRLLYNQGYYIASVDKKT GKTLVEKCEMPGSIYELADANLQHGMQGTRSYRNFPVWGRVIKDELVQVVTPYELNLYKSLHSITIPQELDLKGEEGNPV FVFYSLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45774; Mature: 45774
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVKLASILFYLNSVFVVSCFVSCGSSPTEASSLLTADIRGGMDKPGLLELGDEIKGVT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEHHCCCCCCCCCEECCCCCCCEE FVPLEVTTDDASLIDGVYDYAVTDRYIYVFPVKEPRIVLFDRQGRFIRTLVKEGQGPGEF EEEEEEECCCHHHHHHHHHHEECCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCCC SGILPCIQVDERNDRLFLFSNNRVWEYTLEGEFIGQSTHEYSVIYMRHIGKDRFAAISFP CCCCCEEEECCCCCEEEEEECCEEEEEEECCEEECCCCCCEEEEEEECCCCCCEEEEECC FQPFNGGGFGLGLFSRKGDTIAIKNDFYSFLLPHEKSGFTTSIASAYSDAQNSVLFKTGS CCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC NDTVFCISADRISAACVLDLKNSDAEVIRSLDVTDMSNLRIEKKDPKDIFVQDMIEFPAH CCEEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCHH YYFRLLYNQGYYIASVDKKTGKTLVEKCEMPGSIYELADANLQHGMQGTRSYRNFPVWGR HEEHEEECCCEEEEECCCCCHHHHHHHHCCCCHHHHHHCCHHHHCCCHHHHCCCCCHHHH VIKDELVQVVTPYELNLYKSLHSITIPQELDLKGEEGNPVFVFYSLI HHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MKSVKLASILFYLNSVFVVSCFVSCGSSPTEASSLLTADIRGGMDKPGLLELGDEIKGVT CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEHHCCCCCCCCCEECCCCCCCEE FVPLEVTTDDASLIDGVYDYAVTDRYIYVFPVKEPRIVLFDRQGRFIRTLVKEGQGPGEF EEEEEEECCCHHHHHHHHHHEECCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCCC SGILPCIQVDERNDRLFLFSNNRVWEYTLEGEFIGQSTHEYSVIYMRHIGKDRFAAISFP CCCCCEEEECCCCCEEEEEECCEEEEEEECCEEECCCCCCEEEEEEECCCCCCEEEEECC FQPFNGGGFGLGLFSRKGDTIAIKNDFYSFLLPHEKSGFTTSIASAYSDAQNSVLFKTGS CCCCCCCCEEEEEECCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECC NDTVFCISADRISAACVLDLKNSDAEVIRSLDVTDMSNLRIEKKDPKDIFVQDMIEFPAH CCEEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHCCHH YYFRLLYNQGYYIASVDKKTGKTLVEKCEMPGSIYELADANLQHGMQGTRSYRNFPVWGR HEEHEEECCCEEEEECCCCCHHHHHHHHCCCCHHHHHHCCHHHHCCCHHHHCCCCCHHHH VIKDELVQVVTPYELNLYKSLHSITIPQELDLKGEEGNPVFVFYSLI HHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA