| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is nahA [H]
Identifier: 150009766
GI number: 150009766
Start: 3847489
End: 3850362
Strand: Reverse
Name: nahA [H]
Synonym: BDI_3181
Alternate gene names: 150009766
Gene position: 3850362-3847489 (Counterclockwise)
Preceding gene: 150009767
Following gene: 150009765
Centisome position: 80.03
GC content: 50.56
Gene sequence:
>2874_bases ATGAGATTAATTCAAACTCTTTCTTCTTGCTTGTGTACAGGGATAATAGCCTTATTCACGGCCTGTAGCCAAGCACCACA ATCCCCCATCGATTCCGTGAATCCGTTTATCGGCACGGGATTTCACGGACACACGTATCCCGGGGCCACGGCTCCTTACG GAGCGGTCCAACTCAGTCCGGACACCCGGAAAGGGAATTGGGACGCTTGTTCCGGTTATCATTACAGCGATTCTACCTTA ATGGGTTTTTCCCATACCCATTTAAGCGGTACGGGATGTATCGACCTTGGCGATATCCTATTCCGTCCGTCACTCCAGAC ACCTCTAGCGTTCTCGCACTCGGACGAGAAGGCTTCCCCGGGTTACTACTCGGTGAATCTCAGGGAGGCAGGTGTATTAG CGGAACTTACCACGACCCCGCATGTCGGGATACACCGATATACCTATAAAAAAGGGATAGAGGCTACGTTGGTGGTCGAT ATGGACCATTTATTGGATAACGAATATATATACGAAGGCTGGGTTAAGCAAACTGGGGAGAATGAGCTTACCGGTATGCG GCGTACCCGGGGCTGGGTAGACAATCAGTATGTCTTCTTTGTAGCGCAATTCTCGCAACCCTTCTCTTCCATGGAACAGC CTTCCGAACGGCAAGCCGTACTTACCTTCGATACGACTACCGGAAAGCCCATCATCTGCAAAGTCGGGGTATCGATCGTA AATGAGGAGAACGCCCGTCTGAACCTTGAGCAAGAGACGGATTCCTATGGCTTTGATTTCGATGCCATCCATCAAGCGAC ACGCTCCGATTGGGAAAAAGAACTGGACGTTATCACGGTAGAAGGAGGCACCGAAGCCGAGCGCACGAATTTCTATACGG CGCTATACCATAGCAAGATCATCCCGAACATAGCGAGCGACGTGAACGGACAATACCGCCGTCACGACATGAGCGTAGCG ACGATCCCGGCAGGTCGCCGCCAATTCTCCACCTTCTCCACTTGGGACACCTTCCGGGCCTGGCATCCGATGATGACTCT GTTGGATACTACCTTGGTGAATGATATGGTACAGTCTCTCTTGGATATGTACGACGCCAGCGGCGAGCTTCCGTTATGGC CCTTATCGGCAGGCGAGACCGGAACGATGATCGGTTATCACTCCACATCGATTATAGCGGACGCTTATTTAAAAGGTATT CGCGGATATGACGCGGAACATGCTCTCGAAGCGATGAAGATCTCAGCGGAGAAGAATAAGAAAGGAGCGGATTATTATAT AAAGGAAGGCTTCATCCCGACGAATATCAAGAAAGAATCGGTTTCCTGTTTATTGGAATTCGCCTACGATGACTGGTGTA TCGCACAAATGGCGAAAGCTTTAGGACATATGGATGATTATGAGACCTTCATCAAGCGTTCCCAGAATTTTATCAACGTA TTCGACGGTAGTACCCGGTTCTTCCGGGGCAAACGGCAGGATGGGAATTGGGAGACTCCTTTCGATCCATTCGCTATCGG ACGTTCCTATACGGAGGCTACGGCCTGGCAATATCGTTTCTTTACCCCGCATGACGTATATGGATTGACCCAGTTGTTCG GAGGCCGGGAGGCATTCATCGCTGATCTGGATAGCTTATTTATGGTTACCTCCGAGGTAGTCGGCGATCTGGTAGACGTT ACAGGATTGGTCGGTCAATACGCGCATGGCAACGAGCCTAGCCACCACATGGCTTACCTGTACAGCTACGTAGGCGAGCC GTGGAAAACCCAAGAATGGACCCGCCGCCTGTTGGACGAGATGTACCAACCGACTCCCGAGGGGATTATCGGCAACGAGG ATTGCGGGCAGATGTCCGCTTGGTACCTGTTGAGCAGCCTTGGTTTCTACTCCGTTTGTCCGGGTAGCAACCAGTTTATC CTGACTGCGCCGCTCTTTGACAAAGCGACCGTGAAACTCGGAAACGGAAAGATACTTACGATCACGGCAAACCAACCGGA AAAGAATAAATACATCACGAGCGTATCGCTGAATGGAAAAGAGATTAAGCATTGCTATATCACATACTACCAGTTGATGC AAGGAGGCACACTGGACTTTACGCTCTCGGCGACACCGGACAAGAGTTGGGGAACCGCTCCCGAGTACGCTCCCTATTCC TATACGGAGCAACCTACCGTCTCTATCCCTTACATAGCGAATGATCTGGATTTATTTGAAGGTGAGATTACGGCGGAACT AAAATCCACGACACCCGAGGCGGTTATCCATTACACGCTTGACGGATCGGAACCGGATGAGAACGCTCCGGTATACAGCG AGCCATTCGTCTTAAAAGAGACCACGATTATCAAGGCCAAAGGATATAAAAAGGGATTCGTACCCAGCCGTACGTACTCG ATCCAAGCGACAAAAGCCGTATTACGCCCCGCGTTATCCATACAGCCTACGAAGCATGGGGTAGCTTATACCTATTACGA AGGAGAGTTCCAATGGGTAGCCGATCTGCAAAAAGCGAAGGTAGTCGAGACCGGAACAATACCTGAGCCTTCTATCCTGA ACGCTAAATTGCCGGATCATTTCGGTTATATCTTCACTGGATATATATACGCACCGGAAGACGGTGTCTATGAGTTCAGT ACCCGCTCGGATGACGGTAGCGTCCTCTATATCGGCAAAGAAAAGGTAGTGGACAATGATGCCTCCCACGCCGCCATCGA CGCGACGGGACGCATCCCCTTACAAAAAGGCTACCACCCCTTCGCCTTGCATTATTTCGAGGATTACGAGGGTGAGTACC TAGGCTGGAGCTGGCGTACGCCAAGCATGTCCAAACTAGACGCGATCCCAACAGAGAACCTTTATATAAATTGA
Upstream 100 bases:
>100_bases ATGAAACAGCCCGTGTTATTTTCTACCGGGTAAAAACGCATATCTCAAATAGGTAGTTTACCTTTGCCAATTGTATAATA TAGTAAACAAAAGATACACC
Downstream 100 bases:
>100_bases TAATATTAAATACTGAATCATATGAGAAGAACAACTCTATCCGTGCTATCCGCCTTAGCCATCCTGCTATCCGGCATGAT CGTTCCGGAGGCCGCGGCAC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 957; Mature: 957
Protein sequence:
>957_residues MRLIQTLSSCLCTGIIALFTACSQAPQSPIDSVNPFIGTGFHGHTYPGATAPYGAVQLSPDTRKGNWDACSGYHYSDSTL MGFSHTHLSGTGCIDLGDILFRPSLQTPLAFSHSDEKASPGYYSVNLREAGVLAELTTTPHVGIHRYTYKKGIEATLVVD MDHLLDNEYIYEGWVKQTGENELTGMRRTRGWVDNQYVFFVAQFSQPFSSMEQPSERQAVLTFDTTTGKPIICKVGVSIV NEENARLNLEQETDSYGFDFDAIHQATRSDWEKELDVITVEGGTEAERTNFYTALYHSKIIPNIASDVNGQYRRHDMSVA TIPAGRRQFSTFSTWDTFRAWHPMMTLLDTTLVNDMVQSLLDMYDASGELPLWPLSAGETGTMIGYHSTSIIADAYLKGI RGYDAEHALEAMKISAEKNKKGADYYIKEGFIPTNIKKESVSCLLEFAYDDWCIAQMAKALGHMDDYETFIKRSQNFINV FDGSTRFFRGKRQDGNWETPFDPFAIGRSYTEATAWQYRFFTPHDVYGLTQLFGGREAFIADLDSLFMVTSEVVGDLVDV TGLVGQYAHGNEPSHHMAYLYSYVGEPWKTQEWTRRLLDEMYQPTPEGIIGNEDCGQMSAWYLLSSLGFYSVCPGSNQFI LTAPLFDKATVKLGNGKILTITANQPEKNKYITSVSLNGKEIKHCYITYYQLMQGGTLDFTLSATPDKSWGTAPEYAPYS YTEQPTVSIPYIANDLDLFEGEITAELKSTTPEAVIHYTLDGSEPDENAPVYSEPFVLKETTIIKAKGYKKGFVPSRTYS IQATKAVLRPALSIQPTKHGVAYTYYEGEFQWVADLQKAKVVETGTIPEPSILNAKLPDHFGYIFTGYIYAPEDGVYEFS TRSDDGSVLYIGKEKVVDNDASHAAIDATGRIPLQKGYHPFALHYFEDYEGEYLGWSWRTPSMSKLDAIPTENLYIN
Sequences:
>Translated_957_residues MRLIQTLSSCLCTGIIALFTACSQAPQSPIDSVNPFIGTGFHGHTYPGATAPYGAVQLSPDTRKGNWDACSGYHYSDSTL MGFSHTHLSGTGCIDLGDILFRPSLQTPLAFSHSDEKASPGYYSVNLREAGVLAELTTTPHVGIHRYTYKKGIEATLVVD MDHLLDNEYIYEGWVKQTGENELTGMRRTRGWVDNQYVFFVAQFSQPFSSMEQPSERQAVLTFDTTTGKPIICKVGVSIV NEENARLNLEQETDSYGFDFDAIHQATRSDWEKELDVITVEGGTEAERTNFYTALYHSKIIPNIASDVNGQYRRHDMSVA TIPAGRRQFSTFSTWDTFRAWHPMMTLLDTTLVNDMVQSLLDMYDASGELPLWPLSAGETGTMIGYHSTSIIADAYLKGI RGYDAEHALEAMKISAEKNKKGADYYIKEGFIPTNIKKESVSCLLEFAYDDWCIAQMAKALGHMDDYETFIKRSQNFINV FDGSTRFFRGKRQDGNWETPFDPFAIGRSYTEATAWQYRFFTPHDVYGLTQLFGGREAFIADLDSLFMVTSEVVGDLVDV TGLVGQYAHGNEPSHHMAYLYSYVGEPWKTQEWTRRLLDEMYQPTPEGIIGNEDCGQMSAWYLLSSLGFYSVCPGSNQFI LTAPLFDKATVKLGNGKILTITANQPEKNKYITSVSLNGKEIKHCYITYYQLMQGGTLDFTLSATPDKSWGTAPEYAPYS YTEQPTVSIPYIANDLDLFEGEITAELKSTTPEAVIHYTLDGSEPDENAPVYSEPFVLKETTIIKAKGYKKGFVPSRTYS IQATKAVLRPALSIQPTKHGVAYTYYEGEFQWVADLQKAKVVETGTIPEPSILNAKLPDHFGYIFTGYIYAPEDGVYEFS TRSDDGSVLYIGKEKVVDNDASHAAIDATGRIPLQKGYHPFALHYFEDYEGEYLGWSWRTPSMSKLDAIPTENLYIN >Mature_957_residues MRLIQTLSSCLCTGIIALFTACSQAPQSPIDSVNPFIGTGFHGHTYPGATAPYGAVQLSPDTRKGNWDACSGYHYSDSTL MGFSHTHLSGTGCIDLGDILFRPSLQTPLAFSHSDEKASPGYYSVNLREAGVLAELTTTPHVGIHRYTYKKGIEATLVVD MDHLLDNEYIYEGWVKQTGENELTGMRRTRGWVDNQYVFFVAQFSQPFSSMEQPSERQAVLTFDTTTGKPIICKVGVSIV NEENARLNLEQETDSYGFDFDAIHQATRSDWEKELDVITVEGGTEAERTNFYTALYHSKIIPNIASDVNGQYRRHDMSVA TIPAGRRQFSTFSTWDTFRAWHPMMTLLDTTLVNDMVQSLLDMYDASGELPLWPLSAGETGTMIGYHSTSIIADAYLKGI RGYDAEHALEAMKISAEKNKKGADYYIKEGFIPTNIKKESVSCLLEFAYDDWCIAQMAKALGHMDDYETFIKRSQNFINV FDGSTRFFRGKRQDGNWETPFDPFAIGRSYTEATAWQYRFFTPHDVYGLTQLFGGREAFIADLDSLFMVTSEVVGDLVDV TGLVGQYAHGNEPSHHMAYLYSYVGEPWKTQEWTRRLLDEMYQPTPEGIIGNEDCGQMSAWYLLSSLGFYSVCPGSNQFI LTAPLFDKATVKLGNGKILTITANQPEKNKYITSVSLNGKEIKHCYITYYQLMQGGTLDFTLSATPDKSWGTAPEYAPYS YTEQPTVSIPYIANDLDLFEGEITAELKSTTPEAVIHYTLDGSEPDENAPVYSEPFVLKETTIIKAKGYKKGFVPSRTYS IQATKAVLRPALSIQPTKHGVAYTYYEGEFQWVADLQKAKVVETGTIPEPSILNAKLPDHFGYIFTGYIYAPEDGVYEFS TRSDDGSVLYIGKEKVVDNDASHAAIDATGRIPLQKGYHPFALHYFEDYEGEYLGWSWRTPSMSKLDAIPTENLYIN
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 107205; Mature: 107205
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIQTLSSCLCTGIIALFTACSQAPQSPIDSVNPFIGTGFHGHTYPGATAPYGAVQLSP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECC DTRKGNWDACSGYHYSDSTLMGFSHTHLSGTGCIDLGDILFRPSLQTPLAFSHSDEKASP CCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEHHHHHCCCCCCCCEEECCCCCCCCC GYYSVNLREAGVLAELTTTPHVGIHRYTYKKGIEATLVVDMDHLLDNEYIYEGWVKQTGE CEEEEEEECCCEEEEECCCCCCCEEEEHHHCCCCEEEEEEHHHHHCCCEEEECHHHCCCC NELTGMRRTRGWVDNQYVFFVAQFSQPFSSMEQPSERQAVLTFDTTTGKPIICKVGVSIV CHHHHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCEEEEEECCEEE NEENARLNLEQETDSYGFDFDAIHQATRSDWEKELDVITVEGGTEAERTNFYTALYHSKI CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHEEEEHHHHHH IPNIASDVNGQYRRHDMSVATIPAGRRQFSTFSTWDTFRAWHPMMTLLDTTLVNDMVQSL CCHHHHHCCCCHHHCCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LDMYDASGELPLWPLSAGETGTMIGYHSTSIIADAYLKGIRGYDAEHALEAMKISAEKNK HHHHCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGADYYIKEGFIPTNIKKESVSCLLEFAYDDWCIAQMAKALGHMDDYETFIKRSQNFINV CCCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEE FDGSTRFFRGKRQDGNWETPFDPFAIGRSYTEATAWQYRFFTPHDVYGLTQLFGGREAFI ECCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHH ADLDSLFMVTSEVVGDLVDVTGLVGQYAHGNEPSHHMAYLYSYVGEPWKTQEWTRRLLDE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH MYQPTPEGIIGNEDCGQMSAWYLLSSLGFYSVCPGSNQFILTAPLFDKATVKLGNGKILT HHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCEEEEECCCEEEE ITANQPEKNKYITSVSLNGKEIKHCYITYYQLMQGGTLDFTLSATPDKSWGTAPEYAPYS EECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC YTEQPTVSIPYIANDLDLFEGEITAELKSTTPEAVIHYTLDGSEPDENAPVYSEPFVLKE CCCCCCEECCEEECCCHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEE TTIIKAKGYKKGFVPSRTYSIQATKAVLRPALSIQPTKHGVAYTYYEGEFQWVADLQKAK EEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEHHHHHCE VVETGTIPEPSILNAKLPDHFGYIFTGYIYAPEDGVYEFSTRSDDGSVLYIGKEKVVDND EEECCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCEEEEECHHCCCCC ASHAAIDATGRIPLQKGYHPFALHYFEDYEGEYLGWSWRTPSMSKLDAIPTENLYIN CCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCCCCCEEC >Mature Secondary Structure MRLIQTLSSCLCTGIIALFTACSQAPQSPIDSVNPFIGTGFHGHTYPGATAPYGAVQLSP CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEECC DTRKGNWDACSGYHYSDSTLMGFSHTHLSGTGCIDLGDILFRPSLQTPLAFSHSDEKASP CCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCEEHHHHHCCCCCCCCEEECCCCCCCCC GYYSVNLREAGVLAELTTTPHVGIHRYTYKKGIEATLVVDMDHLLDNEYIYEGWVKQTGE CEEEEEEECCCEEEEECCCCCCCEEEEHHHCCCCEEEEEEHHHHHCCCEEEECHHHCCCC NELTGMRRTRGWVDNQYVFFVAQFSQPFSSMEQPSERQAVLTFDTTTGKPIICKVGVSIV CHHHHHHHHCCCCCCEEEEEEEECCCCHHHHCCCCCCCEEEEEECCCCCEEEEEECCEEE NEENARLNLEQETDSYGFDFDAIHQATRSDWEKELDVITVEGGTEAERTNFYTALYHSKI CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHEEEEHHHHHH IPNIASDVNGQYRRHDMSVATIPAGRRQFSTFSTWDTFRAWHPMMTLLDTTLVNDMVQSL CCHHHHHCCCCHHHCCCEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LDMYDASGELPLWPLSAGETGTMIGYHSTSIIADAYLKGIRGYDAEHALEAMKISAEKNK HHHHCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGADYYIKEGFIPTNIKKESVSCLLEFAYDDWCIAQMAKALGHMDDYETFIKRSQNFINV CCCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCEEEE FDGSTRFFRGKRQDGNWETPFDPFAIGRSYTEATAWQYRFFTPHDVYGLTQLFGGREAFI ECCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCHHHH ADLDSLFMVTSEVVGDLVDVTGLVGQYAHGNEPSHHMAYLYSYVGEPWKTQEWTRRLLDE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH MYQPTPEGIIGNEDCGQMSAWYLLSSLGFYSVCPGSNQFILTAPLFDKATVKLGNGKILT HHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEECCCCCEEEEECCCEEEE ITANQPEKNKYITSVSLNGKEIKHCYITYYQLMQGGTLDFTLSATPDKSWGTAPEYAPYS EECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC YTEQPTVSIPYIANDLDLFEGEITAELKSTTPEAVIHYTLDGSEPDENAPVYSEPFVLKE CCCCCCEECCEEECCCHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEE TTIIKAKGYKKGFVPSRTYSIQATKAVLRPALSIQPTKHGVAYTYYEGEFQWVADLQKAK EEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEHHHHHCE VVETGTIPEPSILNAKLPDHFGYIFTGYIYAPEDGVYEFSTRSDDGSVLYIGKEKVVDND EEECCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCEEEEECHHCCCCC ASHAAIDATGRIPLQKGYHPFALHYFEDYEGEYLGWSWRTPSMSKLDAIPTENLYIN CCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]