| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is aslB [C]
Identifier: 150009748
GI number: 150009748
Start: 3825298
End: 3826734
Strand: Direct
Name: aslB [C]
Synonym: BDI_3163
Alternate gene names: 150009748
Gene position: 3825298-3826734 (Clockwise)
Preceding gene: 150009747
Following gene: 150009749
Centisome position: 79.51
GC content: 29.16
Gene sequence:
>1437_bases ATGATACAACCAGTTATATCAAAATCCGGATATACATATATTTATAGTTCATATATAAATAGCATATTATTGTCTCCCTC TGAAAATGAATATGTTGATATAGATATGGACAAGAATGCATATGAATATTATAAACAAAAAGATTTCTTCTTGAGAGAGA ATAATTTTTTCGAGAAAAAAATCCCCAATATGGAGATTGAATATGATACCTCTTGTATAGAATCAGAGTTAGCAAACCTA AATCAATTACTTATTGAGGTAACGGATGAATGTAATTTATCTTGCAAATACTGTAGTTATGGAGACTTATATTCAAATCA AGATGAACGCAATAGAGGCAAACAAGAATTTAATAATGTTAAAATTCTAATTGACTATTTAATATCACTATGGAAATCAT ATCGTAATATATCATTCAATAATACCATAAACATAGGATTTTTTGGAGGAGAACCTTTAGTCAATATGATATTAATTGAG AAAATAATTAACTACTTAAATGCAGTGAAGATAAAGGGGATAACATTTGTATATAATTTAACGACAAATGCGATATTATT GCCTAAATATATGAATTATCTTGTCGAGAATGATGTGCATTTATTGATAAGCATTGATGGATCCAAACAGAATAATATAT ATCGGGTAAAAAAGGAAGGGAAAGAGTCTTTCGATATTGTATTTGCTAATATCAAAAAATTAAAAGATAATCATCCTAAT TATTTTGATTCCAATGTAAATTTCAACTCTGTATTGCACGATAAAAACTCTGTTGATCAAATTTATAGCTACATAAAGAC TAACTTTGACAAAACACCTTATATATCTGAATTGAATAGAAATGGAATTGCTGAAGACAAGAAAGAAGAATTTAATAGAA TGTTTCATTCTAAAGAAGACAGCATAAAGCAAGCGGTAAACTGTGGAAGTAGCTATTTGAAGGAGATTGCAGATGATTCC CATATTGTGCAATTAGATATTTTCATGCAATCGTATTTTGGCAATACTTACAAAACCATCCCAGACCTATTTTTCCAAGA TAAAGATATCAAATATTTTCCAACAAGCACCTGTGTACCTTTTTCTAAAAAGATATTTTTGACAGTACAAGGGAAAATAT TACCTTGCGAGAAGGTTGGACAACAGTATCCGCTAGGCTATGTGAGAGATGGTAAAATAAATTTGGATAGCAAGGAAGTT AAACAACTGTATTTGAAACTTTATACTCCTATAGTTGATAAATGCAAAAAATGCTTGTTGTGGAAAAATTGTGAGATCTG CGTGTTTTATTTACCCAAAGATGAGGAAGGTCAAACCGTATGTCCTTATTATCTTGGAAATGAAGATGTCAATCGATATT TTTCCACCTACATATACGCTTTAGAAAAGCATCCTGATTTATTAGATAGAATAGAAAACGAAATATTAATAGATTGA
Upstream 100 bases:
>100_bases TACTTCCACTAAGATAGATATTGAATGTCAATTAACTATTATACCAATTTCAATATGTGCGAAATGCTAGTGATATCAAA AGCTAATTAAATAATAAATT
Downstream 100 bases:
>100_bases ACATGGAAAATTATACTCATTGGTTCTATTTAGAATCTTACACATTTCTTTTTTACAGTAAAAATCAATATGTAATATAC AATACATTAAATTCAACTTA
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MIQPVISKSGYTYIYSSYINSILLSPSENEYVDIDMDKNAYEYYKQKDFFLRENNFFEKKIPNMEIEYDTSCIESELANL NQLLIEVTDECNLSCKYCSYGDLYSNQDERNRGKQEFNNVKILIDYLISLWKSYRNISFNNTINIGFFGGEPLVNMILIE KIINYLNAVKIKGITFVYNLTTNAILLPKYMNYLVENDVHLLISIDGSKQNNIYRVKKEGKESFDIVFANIKKLKDNHPN YFDSNVNFNSVLHDKNSVDQIYSYIKTNFDKTPYISELNRNGIAEDKKEEFNRMFHSKEDSIKQAVNCGSSYLKEIADDS HIVQLDIFMQSYFGNTYKTIPDLFFQDKDIKYFPTSTCVPFSKKIFLTVQGKILPCEKVGQQYPLGYVRDGKINLDSKEV KQLYLKLYTPIVDKCKKCLLWKNCEICVFYLPKDEEGQTVCPYYLGNEDVNRYFSTYIYALEKHPDLLDRIENEILID
Sequences:
>Translated_478_residues MIQPVISKSGYTYIYSSYINSILLSPSENEYVDIDMDKNAYEYYKQKDFFLRENNFFEKKIPNMEIEYDTSCIESELANL NQLLIEVTDECNLSCKYCSYGDLYSNQDERNRGKQEFNNVKILIDYLISLWKSYRNISFNNTINIGFFGGEPLVNMILIE KIINYLNAVKIKGITFVYNLTTNAILLPKYMNYLVENDVHLLISIDGSKQNNIYRVKKEGKESFDIVFANIKKLKDNHPN YFDSNVNFNSVLHDKNSVDQIYSYIKTNFDKTPYISELNRNGIAEDKKEEFNRMFHSKEDSIKQAVNCGSSYLKEIADDS HIVQLDIFMQSYFGNTYKTIPDLFFQDKDIKYFPTSTCVPFSKKIFLTVQGKILPCEKVGQQYPLGYVRDGKINLDSKEV KQLYLKLYTPIVDKCKKCLLWKNCEICVFYLPKDEEGQTVCPYYLGNEDVNRYFSTYIYALEKHPDLLDRIENEILID >Mature_478_residues MIQPVISKSGYTYIYSSYINSILLSPSENEYVDIDMDKNAYEYYKQKDFFLRENNFFEKKIPNMEIEYDTSCIESELANL NQLLIEVTDECNLSCKYCSYGDLYSNQDERNRGKQEFNNVKILIDYLISLWKSYRNISFNNTINIGFFGGEPLVNMILIE KIINYLNAVKIKGITFVYNLTTNAILLPKYMNYLVENDVHLLISIDGSKQNNIYRVKKEGKESFDIVFANIKKLKDNHPN YFDSNVNFNSVLHDKNSVDQIYSYIKTNFDKTPYISELNRNGIAEDKKEEFNRMFHSKEDSIKQAVNCGSSYLKEIADDS HIVQLDIFMQSYFGNTYKTIPDLFFQDKDIKYFPTSTCVPFSKKIFLTVQGKILPCEKVGQQYPLGYVRDGKINLDSKEV KQLYLKLYTPIVDKCKKCLLWKNCEICVFYLPKDEEGQTVCPYYLGNEDVNRYFSTYIYALEKHPDLLDRIENEILID
Specific function: Potential Positive Factor For The Regulation Of Arylsulfatase. [C]
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR000385 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 56036; Mature: 56036
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS01305 MOAA_NIFB_PQQE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQPVISKSGYTYIYSSYINSILLSPSENEYVDIDMDKNAYEYYKQKDFFLRENNFFEKK CCCCCCCCCCCCEEHHHHHHHEEECCCCCCEEEEECCCCHHHHHHCCCCEEECCCCHHHC IPNMEIEYDTSCIESELANLNQLLIEVTDECNLSCKYCSYGDLYSNQDERNRGKQEFNNV CCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHCCHHHHCCH KILIDYLISLWKSYRNISFNNTINIGFFGGEPLVNMILIEKIINYLNAVKIKGITFVYNL HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCEEEEEEC TTNAILLPKYMNYLVENDVHLLISIDGSKQNNIYRVKKEGKESFDIVFANIKKLKDNHPN CCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCC YFDSNVNFNSVLHDKNSVDQIYSYIKTNFDKTPYISELNRNGIAEDKKEEFNRMFHSKED CCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHH SIKQAVNCGSSYLKEIADDSHIVQLDIFMQSYFGNTYKTIPDLFFQDKDIKYFPTSTCVP HHHHHHHCCHHHHHHHCCCCEEEEEEEHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCC FSKKIFLTVQGKILPCEKVGQQYPLGYVRDGKINLDSKEVKQLYLKLYTPIVDKCKKCLL CCCEEEEEECCCEECHHHCCCCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHH WKNCEICVFYLPKDEEGQTVCPYYLGNEDVNRYFSTYIYALEKHPDLLDRIENEILID CCCCCEEEEECCCCCCCCEECCEECCCHHHHHHHHHHHHHHHCCCHHHHHCCHHEECC >Mature Secondary Structure MIQPVISKSGYTYIYSSYINSILLSPSENEYVDIDMDKNAYEYYKQKDFFLRENNFFEKK CCCCCCCCCCCCEEHHHHHHHEEECCCCCCEEEEECCCCHHHHHHCCCCEEECCCCHHHC IPNMEIEYDTSCIESELANLNQLLIEVTDECNLSCKYCSYGDLYSNQDERNRGKQEFNNV CCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHCCHHHHCCH KILIDYLISLWKSYRNISFNNTINIGFFGGEPLVNMILIEKIINYLNAVKIKGITFVYNL HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCEEEEEEC TTNAILLPKYMNYLVENDVHLLISIDGSKQNNIYRVKKEGKESFDIVFANIKKLKDNHPN CCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCC YFDSNVNFNSVLHDKNSVDQIYSYIKTNFDKTPYISELNRNGIAEDKKEEFNRMFHSKED CCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHH SIKQAVNCGSSYLKEIADDSHIVQLDIFMQSYFGNTYKTIPDLFFQDKDIKYFPTSTCVP HHHHHHHCCHHHHHHHCCCCEEEEEEEHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCCC FSKKIFLTVQGKILPCEKVGQQYPLGYVRDGKINLDSKEVKQLYLKLYTPIVDKCKKCLL CCCEEEEEECCCEECHHHCCCCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHH WKNCEICVFYLPKDEEGQTVCPYYLGNEDVNRYFSTYIYALEKHPDLLDRIENEILID CCCCCEEEEECCCCCCCCEECCEECCCHHHHHHHHHHHHHHHCCCHHHHHCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]