| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009746
Identifier: 150009746
GI number: 150009746
Start: 3822402
End: 3824225
Strand: Direct
Name: 150009746
Synonym: BDI_3161
Alternate gene names: NA
Gene position: 3822402-3824225 (Clockwise)
Preceding gene: 150009745
Following gene: 150009747
Centisome position: 79.45
GC content: 35.25
Gene sequence:
>1824_bases ATGAGCTCTAAGCAACAGGACTATACCGAATACACTGTCGATTTATCACAATTGACAAAAGAACGCCCTTTAGGGGTAAC GGGTATATTGCGCTGCCAAAACAGTGCGGATTTCCTAGACGCTTGCATAGAGTCCTGTATTGAAGGATTAGATGAGCTGA TTGCGGTATATCACAATTGTACAGATGAGACAGCTAATATACTTAAAAGAAAACAGAGCAAATACCCCTACAAGATCAAA ATCTTTGAATACCAACCCTATATCTATCCTATAGATTTAACGGATGAACAATTCCAAGAGACCATGAATTTGCCGAAGGA TTCAATTCATCTCCTTTCCGGATACACGAATTATGCGATTTCAAAAGTAACCTATCGCTATGCGATCAAGATAGATTCAG ATCAGCTATTTTTTTCCGAATCATTCAAAAAATATTGTGATGCCTACCGCACCGAGCAAAAAGTCCGGATCAACCCTTTG GAACAAATTGCTTATAAGCTATATACATCTTACCTGCATAATTTTAAAAAGGACAAAAGTCCAAAAAGAAAATGGCAAGA CTGGTTAGCGATAAAGATGGTTCCTTTCTATTTTTCCTATTTGAAAAAAAGAATCAAGCAAGATAAAATATTGGTATCCC TCTCTGGTATCAATGTGTTACAAAAAAACGGAGAATGGCTTACTTTTTTAGGAGACGAAAAGATAGACACAACCTACCGG GACATTCTATGCCCATTCAACGGAGTGCGAGATCTTTTCTTTTTCGAGGTCTCTGAAGAAATGACCTACCAAGCTTGTTA TTTGCCAAAAGCTCCCGGCTACAATCAAGTTCTGGAAGTAATGTTTCACAATAAAAAGCTATTTGATGGTGGTCTGATAT GGTTTCATTTACGTCCATGTCTTCAAAAGCACACTGAAACTTATCAATATTGGTATGAAAAAGCAAAGGATCGCTTCATT TCTCTAGAAAAATTCAAGAAATGTAATTATTCAAAGCTGAAAAGAAGGAAAAATTTATTCATACGTTCACGCTTTGAATC CATGTTTTCTTATTTCTATTCTGCGCAACGTCATTCAATTCCTTGGCGCACATTGGAAAATTGGAGACAAGAGGAGTCTC AAGAAAAGATGAGTTCGCTGGATTTGGGAAAATACAAAATCGAGTTTGATACAATCATACAAGAATATATAAGAACTGCT ATTCAAGAATATGAGGTCCGGGATACCCTAAGACTCATGCTTGGCAACCATTCCATAAAAAACGCATTGTTCGTATATAT ACTGTCTTTCATTTCGAAAGAACAAATGGATTATATACGTTCCCGTATCGCCGGAAAATCTATCGAGGAGTCTATTCACA ACATCTCTAATTTCTTGAATCATTTTGAATGGATAGAAAAGAAAAGGAATACCACAAATAACTTTAATATAGATAATCAT CTTTGGACAAAGCTTTTATCTCCATATAAAAGATGTTGCTTGGTTTACCTAGTGGACAAGGAAGAATTGGCTCATATATC GACTTTTTTACAAAAAGAAGAGATTCCAATTCTATTATTATCTGAATATGAGATTCCAGATGATACAGAACTACCGGAAA CAGTTACAGCTGTACAAGTTGAATTTTCCGAACAAAAGGTATTTGAGAATGATAGCATTGAACAAAATTTTCCTAGACTG TTCTTATACGCAAATACGTTTGAGACGATTTTACGAATCTTAAACCCAAGTAAGGTTGTTTGTTTGACATCAAGCAAAAC TTATCAAAAAGAATTATTGCTAGGCTTTGCAAAAGATTTAAATACTAAAATTGAGTGTTGGTAA
Upstream 100 bases:
>100_bases TTGCCATATAGTCCTTATAGAGAGAGCTATATACAGAAAAAAATTTGGGAAACTTGTTTTTCTCAAAATCAATTAGAAAT GAATCAATAATTTAATTACC
Downstream 100 bases:
>100_bases GATGAATACAGAAAAAGACATATTATTACGAAGAATAGCGAATCATCTGATTTTGCATTCAATCGACATAGAGGATATTG GTTTATTCCATGGAAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MSSKQQDYTEYTVDLSQLTKERPLGVTGILRCQNSADFLDACIESCIEGLDELIAVYHNCTDETANILKRKQSKYPYKIK IFEYQPYIYPIDLTDEQFQETMNLPKDSIHLLSGYTNYAISKVTYRYAIKIDSDQLFFSESFKKYCDAYRTEQKVRINPL EQIAYKLYTSYLHNFKKDKSPKRKWQDWLAIKMVPFYFSYLKKRIKQDKILVSLSGINVLQKNGEWLTFLGDEKIDTTYR DILCPFNGVRDLFFFEVSEEMTYQACYLPKAPGYNQVLEVMFHNKKLFDGGLIWFHLRPCLQKHTETYQYWYEKAKDRFI SLEKFKKCNYSKLKRRKNLFIRSRFESMFSYFYSAQRHSIPWRTLENWRQEESQEKMSSLDLGKYKIEFDTIIQEYIRTA IQEYEVRDTLRLMLGNHSIKNALFVYILSFISKEQMDYIRSRIAGKSIEESIHNISNFLNHFEWIEKKRNTTNNFNIDNH LWTKLLSPYKRCCLVYLVDKEELAHISTFLQKEEIPILLLSEYEIPDDTELPETVTAVQVEFSEQKVFENDSIEQNFPRL FLYANTFETILRILNPSKVVCLTSSKTYQKELLLGFAKDLNTKIECW
Sequences:
>Translated_607_residues MSSKQQDYTEYTVDLSQLTKERPLGVTGILRCQNSADFLDACIESCIEGLDELIAVYHNCTDETANILKRKQSKYPYKIK IFEYQPYIYPIDLTDEQFQETMNLPKDSIHLLSGYTNYAISKVTYRYAIKIDSDQLFFSESFKKYCDAYRTEQKVRINPL EQIAYKLYTSYLHNFKKDKSPKRKWQDWLAIKMVPFYFSYLKKRIKQDKILVSLSGINVLQKNGEWLTFLGDEKIDTTYR DILCPFNGVRDLFFFEVSEEMTYQACYLPKAPGYNQVLEVMFHNKKLFDGGLIWFHLRPCLQKHTETYQYWYEKAKDRFI SLEKFKKCNYSKLKRRKNLFIRSRFESMFSYFYSAQRHSIPWRTLENWRQEESQEKMSSLDLGKYKIEFDTIIQEYIRTA IQEYEVRDTLRLMLGNHSIKNALFVYILSFISKEQMDYIRSRIAGKSIEESIHNISNFLNHFEWIEKKRNTTNNFNIDNH LWTKLLSPYKRCCLVYLVDKEELAHISTFLQKEEIPILLLSEYEIPDDTELPETVTAVQVEFSEQKVFENDSIEQNFPRL FLYANTFETILRILNPSKVVCLTSSKTYQKELLLGFAKDLNTKIECW >Mature_606_residues SSKQQDYTEYTVDLSQLTKERPLGVTGILRCQNSADFLDACIESCIEGLDELIAVYHNCTDETANILKRKQSKYPYKIKI FEYQPYIYPIDLTDEQFQETMNLPKDSIHLLSGYTNYAISKVTYRYAIKIDSDQLFFSESFKKYCDAYRTEQKVRINPLE QIAYKLYTSYLHNFKKDKSPKRKWQDWLAIKMVPFYFSYLKKRIKQDKILVSLSGINVLQKNGEWLTFLGDEKIDTTYRD ILCPFNGVRDLFFFEVSEEMTYQACYLPKAPGYNQVLEVMFHNKKLFDGGLIWFHLRPCLQKHTETYQYWYEKAKDRFIS LEKFKKCNYSKLKRRKNLFIRSRFESMFSYFYSAQRHSIPWRTLENWRQEESQEKMSSLDLGKYKIEFDTIIQEYIRTAI QEYEVRDTLRLMLGNHSIKNALFVYILSFISKEQMDYIRSRIAGKSIEESIHNISNFLNHFEWIEKKRNTTNNFNIDNHL WTKLLSPYKRCCLVYLVDKEELAHISTFLQKEEIPILLLSEYEIPDDTELPETVTAVQVEFSEQKVFENDSIEQNFPRLF LYANTFETILRILNPSKVVCLTSSKTYQKELLLGFAKDLNTKIECW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72470; Mature: 72339
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKQQDYTEYTVDLSQLTKERPLGVTGILRCQNSADFLDACIESCIEGLDELIAVYHNC CCCCCCCHHHHHEEHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC TDETANILKRKQSKYPYKIKIFEYQPYIYPIDLTDEQFQETMNLPKDSIHLLSGYTNYAI CHHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCHHHHHHHHCCCHHHHHHHHCCHHHHH SKVTYRYAIKIDSDQLFFSESFKKYCDAYRTEQKVRINPLEQIAYKLYTSYLHNFKKDKS HHEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCCCC PKRKWQDWLAIKMVPFYFSYLKKRIKQDKILVSLSGINVLQKNGEWLTFLGDEKIDTTYR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCEEEEECCCCCCHHHH DILCPFNGVRDLFFFEVSEEMTYQACYLPKAPGYNQVLEVMFHNKKLFDGGLIWFHLRPC HHHCCCCCCCHHHEEEECHHHCCCEEECCCCCCHHHHHHHHHCCCEEECCCEEEEHHHHH LQKHTETYQYWYEKAKDRFISLEKFKKCNYSKLKRRKNLFIRSRFESMFSYFYSAQRHSI HHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PWRTLENWRQEESQEKMSSLDLGKYKIEFDTIIQEYIRTAIQEYEVRDTLRLMLGNHSIK CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH NALFVYILSFISKEQMDYIRSRIAGKSIEESIHNISNFLNHFEWIEKKRNTTNNFNIDNH HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LWTKLLSPYKRCCLVYLVDKEELAHISTFLQKEEIPILLLSEYEIPDDTELPETVTAVQV HHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEE EFSEQKVFENDSIEQNFPRLFLYANTFETILRILNPSKVVCLTSSKTYQKELLLGFAKDL EECHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCC NTKIECW CCCEECC >Mature Secondary Structure SSKQQDYTEYTVDLSQLTKERPLGVTGILRCQNSADFLDACIESCIEGLDELIAVYHNC CCCCCCHHHHHEEHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC TDETANILKRKQSKYPYKIKIFEYQPYIYPIDLTDEQFQETMNLPKDSIHLLSGYTNYAI CHHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCHHHHHHHHCCCHHHHHHHHCCHHHHH SKVTYRYAIKIDSDQLFFSESFKKYCDAYRTEQKVRINPLEQIAYKLYTSYLHNFKKDKS HHEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHCCCC PKRKWQDWLAIKMVPFYFSYLKKRIKQDKILVSLSGINVLQKNGEWLTFLGDEKIDTTYR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCEEEEECCCCCCHHHH DILCPFNGVRDLFFFEVSEEMTYQACYLPKAPGYNQVLEVMFHNKKLFDGGLIWFHLRPC HHHCCCCCCCHHHEEEECHHHCCCEEECCCCCCHHHHHHHHHCCCEEECCCEEEEHHHHH LQKHTETYQYWYEKAKDRFISLEKFKKCNYSKLKRRKNLFIRSRFESMFSYFYSAQRHSI HHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PWRTLENWRQEESQEKMSSLDLGKYKIEFDTIIQEYIRTAIQEYEVRDTLRLMLGNHSIK CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH NALFVYILSFISKEQMDYIRSRIAGKSIEESIHNISNFLNHFEWIEKKRNTTNNFNIDNH HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH LWTKLLSPYKRCCLVYLVDKEELAHISTFLQKEEIPILLLSEYEIPDDTELPETVTAVQV HHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEE EFSEQKVFENDSIEQNFPRLFLYANTFETILRILNPSKVVCLTSSKTYQKELLLGFAKDL EECHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCC NTKIECW CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA