| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150009744
Identifier: 150009744
GI number: 150009744
Start: 3821157
End: 3821864
Strand: Direct
Name: 150009744
Synonym: BDI_3159
Alternate gene names: NA
Gene position: 3821157-3821864 (Clockwise)
Preceding gene: 150009743
Following gene: 150009745
Centisome position: 79.42
GC content: 39.55
Gene sequence:
>708_bases ATGGCAATCCCTAAAATCATACATCAAGTCTGGGAGGGGCGTACAGAACCATGTATGCCCACCCGCTTACAAATCTTGGC AAGAACTTGGCGAGAGCAGAATCCAGATTGGGAATATCACCTTTGGAACGGAGAGGAAATGGATGAGTTGGTAGAAAAAC ATTTTCCGGAGTATCTTTCCATGTATAGAAGTTTTCCATACAATGTACAACGTTGGGACACGATTCGCTATATGATATTA TATGTATATGGGGGAGTCTATACAGATTTGGATACGGAATGTTTTAAGCCTATCGAGCCATTATTAGAAGACGTGATGAT AGGATTTGGCGAAGAGCCCCCGGAGCATAATTTCAACTCAAGTATGTCCACCCTAATAGGAAATGCATTTATGGTTTCTG AGCCAAGATGCGGAGGATGGATAGACATTTTAAAAGAAATTACTGATGCAATGTTACGGGACTATCCAGCACAAAAGGTG ATGCATACAACAGGCCCATTGATGATATCACGGATATTTAATACCTTGAAGAAAAGATACAAGGTTACTCTTTTCCCTTA TTCAAAAGTAACGCCTGTGACGAAAGATGACATGGGTTCATATATCTATCAGGGAGAGACCGCCTCATTCCATGAAAAAA TAAAGGAAGCATATTGTTCTCATTATTTTTTTGGTAGCTGGGGTACGAATTTTTCATTTTACAATTAA
Upstream 100 bases:
>100_bases TCGACATTGCAGTGAACGGGATGCGAACAGGGACATATCAAGTTATCCTGACCCATAAGTTAGGATGGCTAGTGGGTGAA TTTGAAAATCAATAAACCGT
Downstream 100 bases:
>100_bases TGAACGATATGAAAGAGTTATTCATTCAATACAAAGGCATACTAAAAGACCTACTCCGTTACGGGGTACTGAAAACAGAG GCTCTAGAGCATACCGGATT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycoside Transferase Family; PE-PGRS Family Protein; Surface; Glycosyltransferase
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAIPKIIHQVWEGRTEPCMPTRLQILARTWREQNPDWEYHLWNGEEMDELVEKHFPEYLSMYRSFPYNVQRWDTIRYMIL YVYGGVYTDLDTECFKPIEPLLEDVMIGFGEEPPEHNFNSSMSTLIGNAFMVSEPRCGGWIDILKEITDAMLRDYPAQKV MHTTGPLMISRIFNTLKKRYKVTLFPYSKVTPVTKDDMGSYIYQGETASFHEKIKEAYCSHYFFGSWGTNFSFYN
Sequences:
>Translated_235_residues MAIPKIIHQVWEGRTEPCMPTRLQILARTWREQNPDWEYHLWNGEEMDELVEKHFPEYLSMYRSFPYNVQRWDTIRYMIL YVYGGVYTDLDTECFKPIEPLLEDVMIGFGEEPPEHNFNSSMSTLIGNAFMVSEPRCGGWIDILKEITDAMLRDYPAQKV MHTTGPLMISRIFNTLKKRYKVTLFPYSKVTPVTKDDMGSYIYQGETASFHEKIKEAYCSHYFFGSWGTNFSFYN >Mature_234_residues AIPKIIHQVWEGRTEPCMPTRLQILARTWREQNPDWEYHLWNGEEMDELVEKHFPEYLSMYRSFPYNVQRWDTIRYMILY VYGGVYTDLDTECFKPIEPLLEDVMIGFGEEPPEHNFNSSMSTLIGNAFMVSEPRCGGWIDILKEITDAMLRDYPAQKVM HTTGPLMISRIFNTLKKRYKVTLFPYSKVTPVTKDDMGSYIYQGETASFHEKIKEAYCSHYFFGSWGTNFSFYN
Specific function: Unknown
COG id: COG3774
COG function: function code M; Mannosyltransferase OCH1 and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319637, Length=177, Percent_Identity=31.638418079096, Blast_Score=88, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6325200, Length=183, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27794; Mature: 27663
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPKIIHQVWEGRTEPCMPTRLQILARTWREQNPDWEYHLWNGEEMDELVEKHFPEYLS CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHH MYRSFPYNVQRWDTIRYMILYVYGGVYTDLDTECFKPIEPLLEDVMIGFGEEPPEHNFNS HHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH SMSTLIGNAFMVSEPRCGGWIDILKEITDAMLRDYPAQKVMHTTGPLMISRIFNTLKKRY HHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KVTLFPYSKVTPVTKDDMGSYIYQGETASFHEKIKEAYCSHYFFGSWGTNFSFYN EEEEECCCCCCCCCHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AIPKIIHQVWEGRTEPCMPTRLQILARTWREQNPDWEYHLWNGEEMDELVEKHFPEYLS CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHH MYRSFPYNVQRWDTIRYMILYVYGGVYTDLDTECFKPIEPLLEDVMIGFGEEPPEHNFNS HHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH SMSTLIGNAFMVSEPRCGGWIDILKEITDAMLRDYPAQKVMHTTGPLMISRIFNTLKKRY HHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KVTLFPYSKVTPVTKDDMGSYIYQGETASFHEKIKEAYCSHYFFGSWGTNFSFYN EEEEECCCCCCCCCHHHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA