| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009742
Identifier: 150009742
GI number: 150009742
Start: 3818716
End: 3820620
Strand: Direct
Name: 150009742
Synonym: BDI_3157
Alternate gene names: NA
Gene position: 3818716-3820620 (Clockwise)
Preceding gene: 150009741
Following gene: 150009743
Centisome position: 79.37
GC content: 41.05
Gene sequence:
>1905_bases ATGGTAATAAAAATAGATCCAAAAAGTCGGGATTTCCAGCCAAGATATTCTCGTCTTTTTGTATTATTTTTACCCTCAAC AAATAACACGCAAATGAAGAAAAACATTGTTTTCCTGTTAATTCTAATACCTATTATATGGATCTCTTGCGATGGGATGG GGCATCAAACCATAGACTTCCGGAAAGTAGAGAACCTTATGCCTCAACATCCGGATAGCGCGTTAATGCTCCTTGAACAA ATAGAGAACAAAGAAAACCTATCCCGAAAAGATAAGGCACATTATTCTTTGCTGCTGACGGAAGCGGAAGACAAGACGTA CGTTACGCATACCACCGACTCCCTGATCTCGATCGCCGCAGATTATTACGAGAAAACAGACGACTTGGGAAGAAAAGCGA AAGCTTGGTATTATAAAGGAAGAATCAATCAAGACTTGGGGCACCCGCTAAAAGCGCAGGAATATTACCTCAAAGCTCTT CGGGATGAGGAAAAGATAGAGGATCATGCCTTGCTTGGTAGGATCCATAATCATATAGGTATGCTCTATGCCTACCAGAA GGTTTATGAGAAGGCATTGCCTTTCCAGAAAAAAGCGGTGGAGAATTTTCATCTAATAAATGACAGTACAGGACAGGTGT TCGCATTGCGGGACTTAGGGCGTACCTTCTTGATGCTGGGCCTTCAAGACAGCTCCATTATTTGCAACCAAAAAGCGATC GCTTTAATGAGGAAGAGAATTATTCCTTCGGTTTATACGGAATTAGCAGGTCTCTATATAGACAGACAACGCATGGAGGA AGCACATGGATTATTGCGGACATCTTTACAAAACGTAGCAAAACCACAAGCCAAATATCCCGTATATCTAGTGCTTGGGG AACTTTATAAGAAAAGCGGTCAAATCGACTCGGCTCGCTTTTACTTACAAGCCTGTATAAATTCTGCACCTTTACCCGAG ACACGTGCCGGAGGACTTTTCCATTTGAAAGAAATAGCCTTGGAGAAAGGGCAATGGGAACAAGCGGCGTTATTATCTAA GCAATACGAATTATTAAAAGATTCTATAGAGCAAGGAAAGAATGCTGAATCCATCCGGAACGTACAAGCGTTCTATTCAT ATAACGAAATCGAACAGGATTTATGGGAGGCACGGCTTTACGCCTCTAAACAGAAGTCCTTTTATTCTTTACTCATAACG GCTTGCCTGTTTTTATTAACAGTAGCCCTACTGCGTTTCATCCATTACAGGCGAGAACGAAAAAGCCTGTTACAACGGTT AAAAGCCAATGAGGAACAAATTCAAAGAAATGAGCAGACCCTGAAAAATATATCTGACGTAAAGGATAGCCTACAGAACG AAATCCAAATTTACAAAACGACAGAGCGACAACTTTCCAAGGAAAAAGATGAGCAACTAAAGCGGACAAACGAGGAGATT AGGCAAAAAATCATGCAATTAGAGAAATTGTCTCATACCAAAGATGAATTAGAGAAAAATTTGCTCACCCTTCGGAGTGA GAACTCAAACTTAAAGAAACGGGAACAAGCAAGAGAAGAAGAGCGGAAAAAAATAGAGGAATCAGAGCGACTGCAAAACG AACGCCTATATGATAAATTCCGTTCCCCCGCTGGCTGGGAACCCACGGATACGGATTGGCATAAACTTTTCATCTCGGTG GACAAACTTTACCCAAAGATGGTGACCACCTTGCAAAAATCCACCTCCTTAAACGAATCGGAGAGGAAAATCTGTTATCT AAGTAAAATAGGAGTAAAACCCGGGGCGATCGAAATCTTGCTGGGTAAGGGAAACGTATCCGTTTATCGAAAAAGATTGT ATGAGAAGCTCAACAAGAAGGCAGGAACAGCGAAGGATTTTGATAAATATATATCTGATATATAA
Upstream 100 bases:
>100_bases TCGTTAGTTATTCACTTGACAAGCCGTTAGTTATTCACTTGTCAAGCCATAAACGGATGACTTGCTTCTAGTTTAACCGT CTGTTATTCAATATGTTTTA
Downstream 100 bases:
>100_bases TTATTTATACAGGATTTAAAATCAAAAAACGAACAAAAACGAACAAAAGTGAGAACAGGACGAAAAAACATTTTTGCGCA TTGTTCATATTTGTTCATTC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Lipoprotein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat; TPR-Domain-Containing Protein; Transmembrane Protein; TPR Domain-Containing Protein; Regulatory Protein Luxr
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MVIKIDPKSRDFQPRYSRLFVLFLPSTNNTQMKKNIVFLLILIPIIWISCDGMGHQTIDFRKVENLMPQHPDSALMLLEQ IENKENLSRKDKAHYSLLLTEAEDKTYVTHTTDSLISIAADYYEKTDDLGRKAKAWYYKGRINQDLGHPLKAQEYYLKAL RDEEKIEDHALLGRIHNHIGMLYAYQKVYEKALPFQKKAVENFHLINDSTGQVFALRDLGRTFLMLGLQDSSIICNQKAI ALMRKRIIPSVYTELAGLYIDRQRMEEAHGLLRTSLQNVAKPQAKYPVYLVLGELYKKSGQIDSARFYLQACINSAPLPE TRAGGLFHLKEIALEKGQWEQAALLSKQYELLKDSIEQGKNAESIRNVQAFYSYNEIEQDLWEARLYASKQKSFYSLLIT ACLFLLTVALLRFIHYRRERKSLLQRLKANEEQIQRNEQTLKNISDVKDSLQNEIQIYKTTERQLSKEKDEQLKRTNEEI RQKIMQLEKLSHTKDELEKNLLTLRSENSNLKKREQAREEERKKIEESERLQNERLYDKFRSPAGWEPTDTDWHKLFISV DKLYPKMVTTLQKSTSLNESERKICYLSKIGVKPGAIEILLGKGNVSVYRKRLYEKLNKKAGTAKDFDKYISDI
Sequences:
>Translated_634_residues MVIKIDPKSRDFQPRYSRLFVLFLPSTNNTQMKKNIVFLLILIPIIWISCDGMGHQTIDFRKVENLMPQHPDSALMLLEQ IENKENLSRKDKAHYSLLLTEAEDKTYVTHTTDSLISIAADYYEKTDDLGRKAKAWYYKGRINQDLGHPLKAQEYYLKAL RDEEKIEDHALLGRIHNHIGMLYAYQKVYEKALPFQKKAVENFHLINDSTGQVFALRDLGRTFLMLGLQDSSIICNQKAI ALMRKRIIPSVYTELAGLYIDRQRMEEAHGLLRTSLQNVAKPQAKYPVYLVLGELYKKSGQIDSARFYLQACINSAPLPE TRAGGLFHLKEIALEKGQWEQAALLSKQYELLKDSIEQGKNAESIRNVQAFYSYNEIEQDLWEARLYASKQKSFYSLLIT ACLFLLTVALLRFIHYRRERKSLLQRLKANEEQIQRNEQTLKNISDVKDSLQNEIQIYKTTERQLSKEKDEQLKRTNEEI RQKIMQLEKLSHTKDELEKNLLTLRSENSNLKKREQAREEERKKIEESERLQNERLYDKFRSPAGWEPTDTDWHKLFISV DKLYPKMVTTLQKSTSLNESERKICYLSKIGVKPGAIEILLGKGNVSVYRKRLYEKLNKKAGTAKDFDKYISDI >Mature_634_residues MVIKIDPKSRDFQPRYSRLFVLFLPSTNNTQMKKNIVFLLILIPIIWISCDGMGHQTIDFRKVENLMPQHPDSALMLLEQ IENKENLSRKDKAHYSLLLTEAEDKTYVTHTTDSLISIAADYYEKTDDLGRKAKAWYYKGRINQDLGHPLKAQEYYLKAL RDEEKIEDHALLGRIHNHIGMLYAYQKVYEKALPFQKKAVENFHLINDSTGQVFALRDLGRTFLMLGLQDSSIICNQKAI ALMRKRIIPSVYTELAGLYIDRQRMEEAHGLLRTSLQNVAKPQAKYPVYLVLGELYKKSGQIDSARFYLQACINSAPLPE TRAGGLFHLKEIALEKGQWEQAALLSKQYELLKDSIEQGKNAESIRNVQAFYSYNEIEQDLWEARLYASKQKSFYSLLIT ACLFLLTVALLRFIHYRRERKSLLQRLKANEEQIQRNEQTLKNISDVKDSLQNEIQIYKTTERQLSKEKDEQLKRTNEEI RQKIMQLEKLSHTKDELEKNLLTLRSENSNLKKREQAREEERKKIEESERLQNERLYDKFRSPAGWEPTDTDWHKLFISV DKLYPKMVTTLQKSTSLNESERKICYLSKIGVKPGAIEILLGKGNVSVYRKRLYEKLNKKAGTAKDFDKYISDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74068; Mature: 74068
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKIDPKSRDFQPRYSRLFVLFLPSTNNTQMKKNIVFLLILIPIIWISCDGMGHQTIDF CEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RKVENLMPQHPDSALMLLEQIENKENLSRKDKAHYSLLLTEAEDKTYVTHTTDSLISIAA HHHHHHCCCCCCHHHHHHHHHHCHHCCCHHHCCCEEEEEEECCCCEEEEECHHHHHHHHH DYYEKTDDLGRKAKAWYYKGRINQDLGHPLKAQEYYLKALRDEEKIEDHALLGRIHNHIG HHHHHHHHHCCHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH MLYAYQKVYEKALPFQKKAVENFHLINDSTGQVFALRDLGRTFLMLGLQDSSIICNQKAI HHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCEEEHHHHCHHHHHEECCCCCEEHHHHHH ALMRKRIIPSVYTELAGLYIDRQRMEEAHGLLRTSLQNVAKPQAKYPVYLVLGELYKKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC QIDSARFYLQACINSAPLPETRAGGLFHLKEIALEKGQWEQAALLSKQYELLKDSIEQGK CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC NAESIRNVQAFYSYNEIEQDLWEARLYASKQKSFYSLLITACLFLLTVALLRFIHYRRER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLLQRLKANEEQIQRNEQTLKNISDVKDSLQNEIQIYKTTERQLSKEKDEQLKRTNEEI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHH RQKIMQLEKLSHTKDELEKNLLTLRSENSNLKKREQAREEERKKIEESERLQNERLYDKF HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSPAGWEPTDTDWHKLFISVDKLYPKMVTTLQKSTSLNESERKICYLSKIGVKPGAIEIL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHCCCCCCCEEEE LGKGNVSVYRKRLYEKLNKKAGTAKDFDKYISDI EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MVIKIDPKSRDFQPRYSRLFVLFLPSTNNTQMKKNIVFLLILIPIIWISCDGMGHQTIDF CEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH RKVENLMPQHPDSALMLLEQIENKENLSRKDKAHYSLLLTEAEDKTYVTHTTDSLISIAA HHHHHHCCCCCCHHHHHHHHHHCHHCCCHHHCCCEEEEEEECCCCEEEEECHHHHHHHHH DYYEKTDDLGRKAKAWYYKGRINQDLGHPLKAQEYYLKALRDEEKIEDHALLGRIHNHIG HHHHHHHHHCCHHHHHEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH MLYAYQKVYEKALPFQKKAVENFHLINDSTGQVFALRDLGRTFLMLGLQDSSIICNQKAI HHHHHHHHHHHHCCHHHHHHHHHEEEECCCCCEEEHHHHCHHHHHEECCCCCEEHHHHHH ALMRKRIIPSVYTELAGLYIDRQRMEEAHGLLRTSLQNVAKPQAKYPVYLVLGELYKKSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC QIDSARFYLQACINSAPLPETRAGGLFHLKEIALEKGQWEQAALLSKQYELLKDSIEQGK CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC NAESIRNVQAFYSYNEIEQDLWEARLYASKQKSFYSLLITACLFLLTVALLRFIHYRRER CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLLQRLKANEEQIQRNEQTLKNISDVKDSLQNEIQIYKTTERQLSKEKDEQLKRTNEEI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHH RQKIMQLEKLSHTKDELEKNLLTLRSENSNLKKREQAREEERKKIEESERLQNERLYDKF HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSPAGWEPTDTDWHKLFISVDKLYPKMVTTLQKSTSLNESERKICYLSKIGVKPGAIEIL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHCCCCCCCEEEE LGKGNVSVYRKRLYEKLNKKAGTAKDFDKYISDI EECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA