Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is map [C]

Identifier: 150009735

GI number: 150009735

Start: 3808665

End: 3809522

Strand: Reverse

Name: map [C]

Synonym: BDI_3150

Alternate gene names: 150009735

Gene position: 3809522-3808665 (Counterclockwise)

Preceding gene: 150009736

Following gene: 150009706

Centisome position: 79.18

GC content: 45.22

Gene sequence:

>858_bases
ATGTCACGTAGAACAGTAAACAATTGGAAGCCTATCAAGGGGCAACCTCTCACCGAATTAGACAAGAAAATCCTATATAT
CCAAAATAAAGGACATTTAGTACCCACCCGCAAGCTTATCAAGACTCCAGAGCAGATTGAAGGCATCCGCAGAAGTAGCG
TGATCAATACAGGGGTGCTGGACTTAATCCAGAAGGAGATTAAAGAAGGTATGTCTACAGCTGTTATCGATAAATTGGTG
TATGATTATACGGTAGGGCATGGAGCGATTCCAGCCCCCTTAAACTATGAGGGGTTCCCTAAAAGTGTATGTACCTCTAT
CAACGAGGTCGTTTGTCACGGTATTCCCAGTGAGAAGGAGATCCTAAGAGACGGTGATATTATTAATGTGGATGTCTCAA
CGATTTTAGATGGTTATTATTCGGATGCGTCCCGCATGTTCATGATCGGGAACGTATCTCCGGAAAAGCAGAAATTGGTA
CAGGTCGCCAAGGAATGTCTGGAGATCGGTATGAAAGCGGCGAAGCCGTTCGGATTCGTCGGTGATATAGGCAACGCTAT
TCAAAAGCATGCGGAGAAAAACGGATTCTCTGTCGTACGGGATTTATGCGGACATGGCGTCGGTCTGGAATTCCATGAGG
AACCGGAAGTTTGTCATTTCGGACGAAAAGGAACTGGGATGCTTTTAGTTCCGGGTATGGTCTTTACGATCGAGCCTATG
ATTAACATGGGTACTTGGAAAGTATTTATCGACGAGGAAGACGGTTGGACGGTCATCACCGAGGATGAACTACCCTCCGC
CCAATGGGAACATACCTTCTTGATGACAGAGACAGGATTGGAAATTCTTACCTATTAA

Upstream 100 bases:

>100_bases
TCTTCAAGAAGAGCTATTTGGATAAATAAAGAGTATCTACAGGACAGGGTATCTTAAAAAGTCATACCTTTACACTACAT
TTTGAGTAAAATGAATTAAT

Downstream 100 bases:

>100_bases
TATCTAATGCAATTAACGCTTCCGGGCCTTTTCCCGGGCTACCTTTTCCTTTTCCCGCAAGGCTTCCTTGCGGGCTTTTT
CCTTCTCTTTCAATTTTTGC

Product: putative methionine aminopeptidase A

Products: NA

Alternate protein names: MAP; Peptidase M [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVLDLIQKEIKEGMSTAVIDKLV
YDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKEILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLV
QVAKECLEIGMKAAKPFGFVGDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM
INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY

Sequences:

>Translated_285_residues
MSRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVLDLIQKEIKEGMSTAVIDKLV
YDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKEILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLV
QVAKECLEIGMKAAKPFGFVGDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM
INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY
>Mature_284_residues
SRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVLDLIQKEIKEGMSTAVIDKLVY
DYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKEILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLVQ
VAKECLEIGMKAAKPFGFVGDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPMI
NMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY

Specific function: Removes the amino-terminal methionine from nascent proteins [H]

COG id: COG0024

COG function: function code J; Methionine aminopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24A family [H]

Homologues:

Organism=Homo sapiens, GI164420681, Length=249, Percent_Identity=46.5863453815261, Blast_Score=218, Evalue=3e-57,
Organism=Homo sapiens, GI40385867, Length=247, Percent_Identity=43.3198380566802, Blast_Score=202, Evalue=4e-52,
Organism=Escherichia coli, GI1786364, Length=246, Percent_Identity=47.9674796747967, Blast_Score=242, Evalue=2e-65,
Organism=Escherichia coli, GI1788728, Length=212, Percent_Identity=27.8301886792453, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789275, Length=270, Percent_Identity=24.0740740740741, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71996291, Length=254, Percent_Identity=42.1259842519685, Blast_Score=198, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6323273, Length=242, Percent_Identity=45.8677685950413, Blast_Score=233, Evalue=3e-62,
Organism=Drosophila melanogaster, GI21355531, Length=241, Percent_Identity=44.3983402489627, Blast_Score=212, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24583427, Length=271, Percent_Identity=38.3763837638376, Blast_Score=191, Evalue=6e-49,

Paralogues:

None

Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR002467 [H]

Pfam domain/function: PF00557 Peptidase_M24 [H]

EC number: =3.4.11.18 [H]

Molecular weight: Translated: 31779; Mature: 31648

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVL
CCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
DLIQKEIKEGMSTAVIDKLVYDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
ILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLVQVAKECLEIGMKAAKPFGFV
HHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
GDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCEEEEEECC
INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY
CCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCEEECC
>Mature Secondary Structure 
SRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVL
CCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
DLIQKEIKEGMSTAVIDKLVYDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
ILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLVQVAKECLEIGMKAAKPFGFV
HHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
GDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCEEEEEECC
INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY
CCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]