| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is map [C]
Identifier: 150009735
GI number: 150009735
Start: 3808665
End: 3809522
Strand: Reverse
Name: map [C]
Synonym: BDI_3150
Alternate gene names: 150009735
Gene position: 3809522-3808665 (Counterclockwise)
Preceding gene: 150009736
Following gene: 150009706
Centisome position: 79.18
GC content: 45.22
Gene sequence:
>858_bases ATGTCACGTAGAACAGTAAACAATTGGAAGCCTATCAAGGGGCAACCTCTCACCGAATTAGACAAGAAAATCCTATATAT CCAAAATAAAGGACATTTAGTACCCACCCGCAAGCTTATCAAGACTCCAGAGCAGATTGAAGGCATCCGCAGAAGTAGCG TGATCAATACAGGGGTGCTGGACTTAATCCAGAAGGAGATTAAAGAAGGTATGTCTACAGCTGTTATCGATAAATTGGTG TATGATTATACGGTAGGGCATGGAGCGATTCCAGCCCCCTTAAACTATGAGGGGTTCCCTAAAAGTGTATGTACCTCTAT CAACGAGGTCGTTTGTCACGGTATTCCCAGTGAGAAGGAGATCCTAAGAGACGGTGATATTATTAATGTGGATGTCTCAA CGATTTTAGATGGTTATTATTCGGATGCGTCCCGCATGTTCATGATCGGGAACGTATCTCCGGAAAAGCAGAAATTGGTA CAGGTCGCCAAGGAATGTCTGGAGATCGGTATGAAAGCGGCGAAGCCGTTCGGATTCGTCGGTGATATAGGCAACGCTAT TCAAAAGCATGCGGAGAAAAACGGATTCTCTGTCGTACGGGATTTATGCGGACATGGCGTCGGTCTGGAATTCCATGAGG AACCGGAAGTTTGTCATTTCGGACGAAAAGGAACTGGGATGCTTTTAGTTCCGGGTATGGTCTTTACGATCGAGCCTATG ATTAACATGGGTACTTGGAAAGTATTTATCGACGAGGAAGACGGTTGGACGGTCATCACCGAGGATGAACTACCCTCCGC CCAATGGGAACATACCTTCTTGATGACAGAGACAGGATTGGAAATTCTTACCTATTAA
Upstream 100 bases:
>100_bases TCTTCAAGAAGAGCTATTTGGATAAATAAAGAGTATCTACAGGACAGGGTATCTTAAAAAGTCATACCTTTACACTACAT TTTGAGTAAAATGAATTAAT
Downstream 100 bases:
>100_bases TATCTAATGCAATTAACGCTTCCGGGCCTTTTCCCGGGCTACCTTTTCCTTTTCCCGCAAGGCTTCCTTGCGGGCTTTTT CCTTCTCTTTCAATTTTTGC
Product: putative methionine aminopeptidase A
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVLDLIQKEIKEGMSTAVIDKLV YDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKEILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLV QVAKECLEIGMKAAKPFGFVGDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY
Sequences:
>Translated_285_residues MSRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVLDLIQKEIKEGMSTAVIDKLV YDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKEILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLV QVAKECLEIGMKAAKPFGFVGDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY >Mature_284_residues SRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVLDLIQKEIKEGMSTAVIDKLVY DYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKEILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLVQ VAKECLEIGMKAAKPFGFVGDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPMI NMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=249, Percent_Identity=46.5863453815261, Blast_Score=218, Evalue=3e-57, Organism=Homo sapiens, GI40385867, Length=247, Percent_Identity=43.3198380566802, Blast_Score=202, Evalue=4e-52, Organism=Escherichia coli, GI1786364, Length=246, Percent_Identity=47.9674796747967, Blast_Score=242, Evalue=2e-65, Organism=Escherichia coli, GI1788728, Length=212, Percent_Identity=27.8301886792453, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789275, Length=270, Percent_Identity=24.0740740740741, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71996291, Length=254, Percent_Identity=42.1259842519685, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6323273, Length=242, Percent_Identity=45.8677685950413, Blast_Score=233, Evalue=3e-62, Organism=Drosophila melanogaster, GI21355531, Length=241, Percent_Identity=44.3983402489627, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI24583427, Length=271, Percent_Identity=38.3763837638376, Blast_Score=191, Evalue=6e-49,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 31779; Mature: 31648
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVL CCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHH DLIQKEIKEGMSTAVIDKLVYDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH ILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLVQVAKECLEIGMKAAKPFGFV HHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH GDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCEEEEEECC INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY CCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCEEECC >Mature Secondary Structure SRRTVNNWKPIKGQPLTELDKKILYIQNKGHLVPTRKLIKTPEQIEGIRRSSVINTGVL CCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHH DLIQKEIKEGMSTAVIDKLVYDYTVGHGAIPAPLNYEGFPKSVCTSINEVVCHGIPSEKE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH ILRDGDIINVDVSTILDGYYSDASRMFMIGNVSPEKQKLVQVAKECLEIGMKAAKPFGFV HHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCH GDIGNAIQKHAEKNGFSVVRDLCGHGVGLEFHEEPEVCHFGRKGTGMLLVPGMVFTIEPM HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCEEEECCEEEEEECC INMGTWKVFIDEEDGWTVITEDELPSAQWEHTFLMTETGLEILTY CCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]