| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009728
Identifier: 150009728
GI number: 150009728
Start: 3796405
End: 3798744
Strand: Direct
Name: 150009728
Synonym: BDI_3143
Alternate gene names: NA
Gene position: 3796405-3798744 (Clockwise)
Preceding gene: 150009727
Following gene: 150009729
Centisome position: 78.9
GC content: 49.44
Gene sequence:
>2340_bases ATGATACGACTAGTAAGAAATTTAAGATGGATAACGACTACGGCGTTATCGCTCGCGTTGGTGGGAACTGCCTGTTCCGG TCCGACCCGGACTATCGAGGAGGTTCATTTCTCTGATTATGTAAATCCCTTTATCGGGGCGAGTACGAATACGGAGGCGG CCGGTGCTTACCATGGCTTGGGGAAGACCTTCCCCGGTGCGACTACCCCTTTCGGTATGGTACAGGTAAGTCCGAATACG ATTACGGGGGGCGACAATGGTTCCGGATATAGCTACGAGCATGAGACGATCGAGGGATTCGCCTTTACGCAGATGAGTGG TATCGGCTGGTACGGTGATCTGGGTAATTTATTGGTAATGCCTACCGTGGGCGATCTGCGCACGAACTCGGGAAAAGAGG GGGGCGTAGCCGGGTATCGTTCCCGGTATGATAAATCTTCCGAGGAGGCTAAGGCTGGATATTATAAGGTATTGCTTAGC GATTACCAGATACAAGCGGAAGCGACAGCGGCTCCTCATAGCGGTATGCTGCGATTCGTTTTCCCCGAGAATAAGCAGTC CCGCATCCAGTTGGACTTAGCCCGTCGTGTAGGAGGTACTTCTACGTATCAGGCGGTTCAAGTGATAGATGACCATACGA TCGCCGGACGAATGGAATGTACGCCGGAAGGCGGAGGCTGGGGGAATGGTGAAGGTTCTTCCCGGTATACCGTGTATTTT TATGCGCAGTTCTCCAAACCGTTGAAAGATTATGGTGTATGGAGCGTGGATATTCCGGAAGGACAGGATCGTCATCGGGA ATTCGTGGAGAGCCCGGCTTTCCAGACATTGACAGCGAACGCAAAGATTTCGGAGAGACCAAAGGCATATGAGGGCGAGC ACCTCGGGTTCTTTACGGAGTTTGAGACCGAGGCGAATGAGGAGGTTCTTTTCAAGGCCGGTATTTCCTTTGTAAGCTTG GAGGGTGCGGAAAAGAACTTGAAAGCGGAGATCAAGGATTGGGATTTTGACGCGGTACGTTCTCGTGCCCGCTCGTTGTG GGATACGGCTTTGGCTAAGATGGATGTCAGCGGTGGAACGGATGAGCAGAAGGTGATCTTCTATACCTCCTTGTATCATA CAATGATCGATCCGAGGATTTACACGGATGTGGATGGTCAATATATGGGCGCGGATGGAAAAGCGCATAAGTCGGATACG TTCACGAAACGTACGATCTTTAGCGGTTGGGACGTGTTCCGTAGTCAGATGCCTTTGCAAACGATTATTAATCCGGTATT GGTGAACGATTTGTTGAAGTCATTGACAACGATGGCAGAGGAGAGTGGCCGTGAGTACTATGAGCGCTGGGAGTTGTTGA ACGCCTATAGCGGTTGTATGTTAGGAAATCCGGCTATATCGGTCTTGGCGGATGCCTATGCGAAAGGTATTTGTAGCTTG GATATGGAAAAGGCTTATCGGTATGCGGATAAAACCTCGAGAATGTTCGGGAATGCGGAGTTGGGCTATACCCCGAATCC GCAGAGTATCTCCAAAACCTTGGAGTATGCGTATACGGAATGGTGTATGTCTCAGTTGGCGAAATCATTAGGAAAACAGG AGGATGCGGTTTATTATGCGAAGTTGGCTCAGTCTTACCGGAATTTATATGATGCGGAGAAACATAGCTTCCGCCCGAGA GAAGCGAATGGCCGGTTTGAGGCTTGGCCGGAAGAGGGTAAGCTGAAGGAATGGTACGGCTGTATGGAATGCAATGAGCT GCAACAGGGGTGGTTCGTGCCTCACGATATTCCGGGTATGGTGGAACTGATGGGAGGAACGGAACGGGTGATTGCCGATC TGGATACGATGTTCGACAAGACACCTACGGATTTCCTGTGGAACGCTTATTACAATCATGCGAACGAGCCGGTTCATCAT GTGCCTTTCTTGTACAATCATTTGGGACAGCCGTGGAAAACCCAGAAATGGTCTCGTTTCATTTGCGATAAGGCGTATAA GAATAAGGTAGAAGGCTTGGTTGGAAACGAGGATGTCGGTCAGATGTCCGCTTGGTATGTATTGGCGGCATGTGGTTTGT ATCCGGTTTGTCCGGGAGATACTCGCTATGAGATATCCAGCCCGGTTTTTGAGAAGACCGAGATCCAGGTTGGTGAAGGG AATACATTTATCATACGAGCCAACCGAAATACCCCGGAAAACACCTATATCCAATCCGCTAAATTAAACGGGATGGATTA TACGAGATGCTATCTTGATTATAAGGATATTATGAAAGGTGGCGTACTAGAATTGGAGATGGGGCCCGAGCCGAATACAA ATTGGGGCGTGAATAATTAA
Upstream 100 bases:
>100_bases CGGAGATCCGGGAGGCTTGGAACCAACAAATCGATATGTTGGTGGATCGTATGTATCAGATCGCCCAACCGAAGGTACGT AGAATAGAACTTATAAAAAA
Downstream 100 bases:
>100_bases TCAGTAAATAAAATAACATGAAACTCAATACTTTTTATAAACAGGGGGCGGCTTTAGCCCTCTGTTTAACCCTCTCTTTT CCTGTTTTTGCGGAGAAAGA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; Secreted Protein; Sugar Hydrolase; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MIRLVRNLRWITTTALSLALVGTACSGPTRTIEEVHFSDYVNPFIGASTNTEAAGAYHGLGKTFPGATTPFGMVQVSPNT ITGGDNGSGYSYEHETIEGFAFTQMSGIGWYGDLGNLLVMPTVGDLRTNSGKEGGVAGYRSRYDKSSEEAKAGYYKVLLS DYQIQAEATAAPHSGMLRFVFPENKQSRIQLDLARRVGGTSTYQAVQVIDDHTIAGRMECTPEGGGWGNGEGSSRYTVYF YAQFSKPLKDYGVWSVDIPEGQDRHREFVESPAFQTLTANAKISERPKAYEGEHLGFFTEFETEANEEVLFKAGISFVSL EGAEKNLKAEIKDWDFDAVRSRARSLWDTALAKMDVSGGTDEQKVIFYTSLYHTMIDPRIYTDVDGQYMGADGKAHKSDT FTKRTIFSGWDVFRSQMPLQTIINPVLVNDLLKSLTTMAEESGREYYERWELLNAYSGCMLGNPAISVLADAYAKGICSL DMEKAYRYADKTSRMFGNAELGYTPNPQSISKTLEYAYTEWCMSQLAKSLGKQEDAVYYAKLAQSYRNLYDAEKHSFRPR EANGRFEAWPEEGKLKEWYGCMECNELQQGWFVPHDIPGMVELMGGTERVIADLDTMFDKTPTDFLWNAYYNHANEPVHH VPFLYNHLGQPWKTQKWSRFICDKAYKNKVEGLVGNEDVGQMSAWYVLAACGLYPVCPGDTRYEISSPVFEKTEIQVGEG NTFIIRANRNTPENTYIQSAKLNGMDYTRCYLDYKDIMKGGVLELEMGPEPNTNWGVNN
Sequences:
>Translated_779_residues MIRLVRNLRWITTTALSLALVGTACSGPTRTIEEVHFSDYVNPFIGASTNTEAAGAYHGLGKTFPGATTPFGMVQVSPNT ITGGDNGSGYSYEHETIEGFAFTQMSGIGWYGDLGNLLVMPTVGDLRTNSGKEGGVAGYRSRYDKSSEEAKAGYYKVLLS DYQIQAEATAAPHSGMLRFVFPENKQSRIQLDLARRVGGTSTYQAVQVIDDHTIAGRMECTPEGGGWGNGEGSSRYTVYF YAQFSKPLKDYGVWSVDIPEGQDRHREFVESPAFQTLTANAKISERPKAYEGEHLGFFTEFETEANEEVLFKAGISFVSL EGAEKNLKAEIKDWDFDAVRSRARSLWDTALAKMDVSGGTDEQKVIFYTSLYHTMIDPRIYTDVDGQYMGADGKAHKSDT FTKRTIFSGWDVFRSQMPLQTIINPVLVNDLLKSLTTMAEESGREYYERWELLNAYSGCMLGNPAISVLADAYAKGICSL DMEKAYRYADKTSRMFGNAELGYTPNPQSISKTLEYAYTEWCMSQLAKSLGKQEDAVYYAKLAQSYRNLYDAEKHSFRPR EANGRFEAWPEEGKLKEWYGCMECNELQQGWFVPHDIPGMVELMGGTERVIADLDTMFDKTPTDFLWNAYYNHANEPVHH VPFLYNHLGQPWKTQKWSRFICDKAYKNKVEGLVGNEDVGQMSAWYVLAACGLYPVCPGDTRYEISSPVFEKTEIQVGEG NTFIIRANRNTPENTYIQSAKLNGMDYTRCYLDYKDIMKGGVLELEMGPEPNTNWGVNN >Mature_779_residues MIRLVRNLRWITTTALSLALVGTACSGPTRTIEEVHFSDYVNPFIGASTNTEAAGAYHGLGKTFPGATTPFGMVQVSPNT ITGGDNGSGYSYEHETIEGFAFTQMSGIGWYGDLGNLLVMPTVGDLRTNSGKEGGVAGYRSRYDKSSEEAKAGYYKVLLS DYQIQAEATAAPHSGMLRFVFPENKQSRIQLDLARRVGGTSTYQAVQVIDDHTIAGRMECTPEGGGWGNGEGSSRYTVYF YAQFSKPLKDYGVWSVDIPEGQDRHREFVESPAFQTLTANAKISERPKAYEGEHLGFFTEFETEANEEVLFKAGISFVSL EGAEKNLKAEIKDWDFDAVRSRARSLWDTALAKMDVSGGTDEQKVIFYTSLYHTMIDPRIYTDVDGQYMGADGKAHKSDT FTKRTIFSGWDVFRSQMPLQTIINPVLVNDLLKSLTTMAEESGREYYERWELLNAYSGCMLGNPAISVLADAYAKGICSL DMEKAYRYADKTSRMFGNAELGYTPNPQSISKTLEYAYTEWCMSQLAKSLGKQEDAVYYAKLAQSYRNLYDAEKHSFRPR EANGRFEAWPEEGKLKEWYGCMECNELQQGWFVPHDIPGMVELMGGTERVIADLDTMFDKTPTDFLWNAYYNHANEPVHH VPFLYNHLGQPWKTQKWSRFICDKAYKNKVEGLVGNEDVGQMSAWYVLAACGLYPVCPGDTRYEISSPVFEKTEIQVGEG NTFIIRANRNTPENTYIQSAKLNGMDYTRCYLDYKDIMKGGVLELEMGPEPNTNWGVNN
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87425; Mature: 87425
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLVRNLRWITTTALSLALVGTACSGPTRTIEEVHFSDYVNPFIGASTNTEAAGAYHGL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCC GKTFPGATTPFGMVQVSPNTITGGDNGSGYSYEHETIEGFAFTQMSGIGWYGDLGNLLVM CCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE PTVGDLRTNSGKEGGVAGYRSRYDKSSEEAKAGYYKVLLSDYQIQAEATAAPHSGMLRFV CCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCEEEEEEECCEEEEECCCCCCCCEEEEE FPENKQSRIQLDLARRVGGTSTYQAVQVIDDHTIAGRMECTPEGGGWGNGEGSSRYTVYF ECCCCCCCEEHHHHHHCCCCCHHHEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEE YAQFSKPLKDYGVWSVDIPEGQDRHREFVESPAFQTLTANAKISERPKAYEGEHLGFFTE EEECCCCHHHCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEE FETEANEEVLFKAGISFVSLEGAEKNLKAEIKDWDFDAVRSRARSLWDTALAKMDVSGGT CCCCCCCEEEEECCCCEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHEECCCCC DEQKVIFYTSLYHTMIDPRIYTDVDGQYMGADGKAHKSDTFTKRTIFSGWDVFRSQMPLQ CCCEEEEEEEHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH TIINPVLVNDLLKSLTTMAEESGREYYERWELLNAYSGCMLGNPAISVLADAYAKGICSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCC DMEKAYRYADKTSRMFGNAELGYTPNPQSISKTLEYAYTEWCMSQLAKSLGKQEDAVYYA CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KLAQSYRNLYDAEKHSFRPREANGRFEAWPEEGKLKEWYGCMECNELQQGWFVPHDIPGM HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCH VELMGGTERVIADLDTMFDKTPTDFLWNAYYNHANEPVHHVPFLYNHLGQPWKTQKWSRF HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHH ICDKAYKNKVEGLVGNEDVGQMSAWYVLAACGLYPVCPGDTRYEISSPVFEKTEIQVGEG HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEECCEEEECCC NTFIIRANRNTPENTYIQSAKLNGMDYTRCYLDYKDIMKGGVLELEMGPEPNTNWGVNN CEEEEECCCCCCCCCEEEEEECCCCCHHHEEECHHHHHCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MIRLVRNLRWITTTALSLALVGTACSGPTRTIEEVHFSDYVNPFIGASTNTEAAGAYHGL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCC GKTFPGATTPFGMVQVSPNTITGGDNGSGYSYEHETIEGFAFTQMSGIGWYGDLGNLLVM CCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEE PTVGDLRTNSGKEGGVAGYRSRYDKSSEEAKAGYYKVLLSDYQIQAEATAAPHSGMLRFV CCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHCCEEEEEEECCEEEEECCCCCCCCEEEEE FPENKQSRIQLDLARRVGGTSTYQAVQVIDDHTIAGRMECTPEGGGWGNGEGSSRYTVYF ECCCCCCCEEHHHHHHCCCCCHHHEEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEE YAQFSKPLKDYGVWSVDIPEGQDRHREFVESPAFQTLTANAKISERPKAYEGEHLGFFTE EEECCCCHHHCCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCEEEE FETEANEEVLFKAGISFVSLEGAEKNLKAEIKDWDFDAVRSRARSLWDTALAKMDVSGGT CCCCCCCEEEEECCCCEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHEECCCCC DEQKVIFYTSLYHTMIDPRIYTDVDGQYMGADGKAHKSDTFTKRTIFSGWDVFRSQMPLQ CCCEEEEEEEHHHHHCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHH TIINPVLVNDLLKSLTTMAEESGREYYERWELLNAYSGCMLGNPAISVLADAYAKGICSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCCCCC DMEKAYRYADKTSRMFGNAELGYTPNPQSISKTLEYAYTEWCMSQLAKSLGKQEDAVYYA CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KLAQSYRNLYDAEKHSFRPREANGRFEAWPEEGKLKEWYGCMECNELQQGWFVPHDIPGM HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCH VELMGGTERVIADLDTMFDKTPTDFLWNAYYNHANEPVHHVPFLYNHLGQPWKTQKWSRF HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHH ICDKAYKNKVEGLVGNEDVGQMSAWYVLAACGLYPVCPGDTRYEISSPVFEKTEIQVGEG HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEECCEEEECCC NTFIIRANRNTPENTYIQSAKLNGMDYTRCYLDYKDIMKGGVLELEMGPEPNTNWGVNN CEEEEECCCCCCCCCEEEEEECCCCCHHHEEECHHHHHCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA