| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009721
Identifier: 150009721
GI number: 150009721
Start: 3782969
End: 3783916
Strand: Direct
Name: 150009721
Synonym: BDI_3136
Alternate gene names: NA
Gene position: 3782969-3783916 (Clockwise)
Preceding gene: 150009720
Following gene: 150009722
Centisome position: 78.63
GC content: 50.95
Gene sequence:
>948_bases ATGAGCAAGAGAAAGAATAACCGCTTGGGCAAGGCGGGCATAACATTTTATACCTATGCCACCGAACGCATCCGGGAGAA ACGTTTAGCGGGGAAACATAACACCGCCGATTTATATAGGACGACCCGTAATTGGATCTGCGCCTTTCTGGGTAGGAGAA ACCTTCTTTTCCCGGAGATAACCCCGGGCTTAATAAGCCGTTTTGTCGCTTATCTGCAATCCGCCGGCTTGCGAGTGAAT ACCGTGAATACATACCTCAGCAACTTTCGCTCGATTTATAACCAAGCTTGCCGGGATGGTCTGTTGCCGGCTTGCGTCGT ATCGCCTTTCGCATACTTGAACTTGAAGCGGGAAAGAGCCGGATCTAGGGCGTTGGGAAACGAGTCGCTCCGGGAGATCG TGACCTTGAAGTCTGAGGAGCCGGATTTGGCGTGCGTGATCGACTATTGTACGTTCGCCTATTTATCTTGCGGCATGCCT TTCGCGGATATGGCTCGCTTGACTACGGCGAACCTGTATGGCGAGGAGATCGTATATCGGCGTAAGAAGACGGGGACCTT AATCCGTGTCGGGATAACAGCGGGGATGCGGCGGTTGATTAATAAGTATGCGGACGCTTCTTCCCCGTACCTTTTCCCTA TTTTATCTCCGGGTAGAGAGGTAGGGCATGAGGAATACAAGGCGATACTGCGTTCGTATAATAACTCGTTGAAGAAGATC GGTCGTGCGCTATCTCGTCCCATTCATCTGACCTCGTATGTTTTCCGCCATACATGGGCAACGAACGCCTTGCGGAAACA AGTCCCTTTATCGATCATTAGCCAAGCGTTGGGGCATACCTCGGAAAAAACAACACGTTTTTATCTGGCCTCTTTGGAAC AGTCGGAATTGAATCGTGCGAACGCTAGGGTGACGGAAGAGGTGGATTTGCTTTTGGCGGCTGGGTGA
Upstream 100 bases:
>100_bases CCGACTTGATTCACGAGCCCGAGATGGACTTGGCTTGATTTTGTTTTTATGCTATTTTTGATGGTAGATAATAATACGTT TAATCATCAAAAAAGGAGAT
Downstream 100 bases:
>100_bases TGCCCTTATTCGCGAAATAAGGGGAAGAGCCTATTCAGCATAAAAATTACCTATAATAGGCTATTTTCAACGGAAGGCTT GGCAAATGTAAAAAATATTA
Product: putative integrase/transposase
Products: NA
Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Integrase Family Protein; Site-Specific Recombinase IntIA; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Bacteriophage Integrase; Phage Integrase Family Protein; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSKRKNNRLGKAGITFYTYATERIREKRLAGKHNTADLYRTTRNWICAFLGRRNLLFPEITPGLISRFVAYLQSAGLRVN TVNTYLSNFRSIYNQACRDGLLPACVVSPFAYLNLKRERAGSRALGNESLREIVTLKSEEPDLACVIDYCTFAYLSCGMP FADMARLTTANLYGEEIVYRRKKTGTLIRVGITAGMRRLINKYADASSPYLFPILSPGREVGHEEYKAILRSYNNSLKKI GRALSRPIHLTSYVFRHTWATNALRKQVPLSIISQALGHTSEKTTRFYLASLEQSELNRANARVTEEVDLLLAAG
Sequences:
>Translated_315_residues MSKRKNNRLGKAGITFYTYATERIREKRLAGKHNTADLYRTTRNWICAFLGRRNLLFPEITPGLISRFVAYLQSAGLRVN TVNTYLSNFRSIYNQACRDGLLPACVVSPFAYLNLKRERAGSRALGNESLREIVTLKSEEPDLACVIDYCTFAYLSCGMP FADMARLTTANLYGEEIVYRRKKTGTLIRVGITAGMRRLINKYADASSPYLFPILSPGREVGHEEYKAILRSYNNSLKKI GRALSRPIHLTSYVFRHTWATNALRKQVPLSIISQALGHTSEKTTRFYLASLEQSELNRANARVTEEVDLLLAAG >Mature_314_residues SKRKNNRLGKAGITFYTYATERIREKRLAGKHNTADLYRTTRNWICAFLGRRNLLFPEITPGLISRFVAYLQSAGLRVNT VNTYLSNFRSIYNQACRDGLLPACVVSPFAYLNLKRERAGSRALGNESLREIVTLKSEEPDLACVIDYCTFAYLSCGMPF ADMARLTTANLYGEEIVYRRKKTGTLIRVGITAGMRRLINKYADASSPYLFPILSPGREVGHEEYKAILRSYNNSLKKIG RALSRPIHLTSYVFRHTWATNALRKQVPLSIISQALGHTSEKTTRFYLASLEQSELNRANARVTEEVDLLLAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35609; Mature: 35477
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRKNNRLGKAGITFYTYATERIREKRLAGKHNTADLYRTTRNWICAFLGRRNLLFPEI CCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TPGLISRFVAYLQSAGLRVNTVNTYLSNFRSIYNQACRDGLLPACVVSPFAYLNLKRERA CHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHC GSRALGNESLREIVTLKSEEPDLACVIDYCTFAYLSCGMPFADMARLTTANLYGEEIVYR CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RKKTGTLIRVGITAGMRRLINKYADASSPYLFPILSPGREVGHEEYKAILRSYNNSLKKI HHCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHH GRALSRPIHLTSYVFRHTWATNALRKQVPLSIISQALGHTSEKTTRFYLASLEQSELNRA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NARVTEEVDLLLAAG HCHHHHHHHEEEECC >Mature Secondary Structure SKRKNNRLGKAGITFYTYATERIREKRLAGKHNTADLYRTTRNWICAFLGRRNLLFPEI CCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TPGLISRFVAYLQSAGLRVNTVNTYLSNFRSIYNQACRDGLLPACVVSPFAYLNLKRERA CHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHC GSRALGNESLREIVTLKSEEPDLACVIDYCTFAYLSCGMPFADMARLTTANLYGEEIVYR CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RKKTGTLIRVGITAGMRRLINKYADASSPYLFPILSPGREVGHEEYKAILRSYNNSLKKI HHCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHH GRALSRPIHLTSYVFRHTWATNALRKQVPLSIISQALGHTSEKTTRFYLASLEQSELNRA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NARVTEEVDLLLAAG HCHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA