| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009719
Identifier: 150009719
GI number: 150009719
Start: 3780101
End: 3781918
Strand: Direct
Name: 150009719
Synonym: BDI_3134
Alternate gene names: NA
Gene position: 3780101-3781918 (Clockwise)
Preceding gene: 150009718
Following gene: 150009720
Centisome position: 78.57
GC content: 46.42
Gene sequence:
>1818_bases ATGAGAAGAACTATAATTTATTCCTTGTGTTGCGCTTCCTTATTACTTTCTTCCTGTGATTTGGATGTTCCTGTGACCGA CCGTTTGCCGGATGAGGAAGTTTGGAAGGATGATAATCTGATAACAGGAGTGTTCTCTAGATTGTATAACCAGATGCAGA TGGAACATAACTCCACTTATTTTGAGGGATGGGATGTTTGGAATGTCAGCTTAGTGACCGCTTCAGATGAGGGTACAGGA GCTTACCAAGCTGGGGATCTTGGTACGGGTGACGTTGCCCGTGCGAATTTCAATGATGAGTGGTTTGGTCTGTGGGAGGA CGGTTTTAAGGCTGTTCGAGCGACGAATCTGGTATTACAAGAGCTGAATGCGGCCGAGATGCCGGAAAGCAAACGGCAGC AATTGATCGCCGAGGCTCGTTTTATTCGTGCGTTCCATTATTTTAATCTGGTAAAACGCTACGGAGGCGTTCCTATCGTG ACAGAAGTACAGCAATATACCGGTCCGGAAGACTTGTATGGCTTACAAGTTTCCCGTGATAAGGAGCAAGAAGTCTGGGA TTTTATTCTAACTGAATTAGACGAGTCCGCTTTGGAATTACCGGAGACCCGTGAATCTGTGGAAAGAACCCGTGCCACTC GATATGCGGCTTATGCGTTGCAATCTCGTGCGGCATTGTATGCGGCATCGATCGCTAAATACGGCAAAGTGCAATTGAAC GGTATCGTTGGCGTGAATAGCGATGACGCTAACGCATATTGGGCGAAATCGATCGAGGCGGCGGATAAAGTGATTAACTC GGGTAAATATACGCTTTACAACCAGTATGCGGACCGGGTGGAGAACTTCCGGAATATGTTTCTGGAGAAAAGAGGATGTT CGGAGTTTATCTTCTGGAAAGAGTTTCTGGCTACCGATCTAGGCCATTCTTGGGATTTATTGAATGTGCCGTTTAGCTTC GTGCAGAATGGCTATGGTTGCGGGCAGAATCCCACACTCGATTTAATAGAGGCTTTTGAATATAAAGATGGTTCAGACGG TACCTTGAAATTGAAGGATGCTTCTGGCAATTATATCAAATATGACTCTCCATTGGATCTATTTAAGGACAAGGACCCAC GTCTTCGGGCGACTTTCTATTTACCGATGGATGAATGTAGGGGAGGGATCGTCGAGATTCGTCGGGGTATTTACGATGCC TCTAAATCTGGGGATGCCCGTTTTATCACCAGCAATAACGTGAACGAGTATTATGGTGAGGAAGGTAATCAGATGAAGAT CTTAGGTAAGGATGGCGTATGGGATACCGGGGATGTTGGAAAGACCGGCTTCTATACGAAGAAGTTCTCAGACGAGGGAG TGATGGATATCTCCGGGAATAAATCAGATGCTCCATGGCCGGTGTTCCGTCTGGCCGAGATGTATTTGAACAAGGCGGAA GCCGCTATGGAATTAGGCAAGACGGGCGATGCCGCTACCGCATTGAATATGGTTCGTGAGAGAGCGGGCATCCGTACGCT TTCTGCCGGGGAGGTTTCATTGGATCGTATCCGTAATGAGCGCCGTGTAGAGTTGGCGTATGAGAATCATCGTCATTGGG ATTTAAAGCGTTGGCATATCGCGCATATCAAAATGGCTGATTTCCCGACCATGGCGCTTTATCCATGGTATATCTGGGGG GAAGGTAAATATATCTTTACGACTGGTAAGGCTCCGAAACCTAATAAGGTATTCTTGGAACGTAACTATTACATAAAGAT CAAGGATAGCGATATGGGTAGTAACCCGATGTTGGCTCCTAATAATCCCGGTTTCTAA
Upstream 100 bases:
>100_bases AGGCAATAGAAGGTTGGCAAAGTTTCTATTATCCACAATTGAAAGTATATTCATTCGGTGTTAACGTTAGTTTCTAATAG GATTTAAAAGAAAAATGAAG
Downstream 100 bases:
>100_bases TTAATGAAAGGAAAAAGAATCATGAAAAAGATCATATATAATATAGCGATTGTCTTGGCGGCTTCTTGCCTCTTTGCCTC CTGTGAGGATGATAATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; RagB/SusD Domain-Containing Protein; RagB/SusD Family Protein; Ragb/Susd Domain Protein; Lipoprotein; Lipoprotein RagB; Liporotein
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MRRTIIYSLCCASLLLSSCDLDVPVTDRLPDEEVWKDDNLITGVFSRLYNQMQMEHNSTYFEGWDVWNVSLVTASDEGTG AYQAGDLGTGDVARANFNDEWFGLWEDGFKAVRATNLVLQELNAAEMPESKRQQLIAEARFIRAFHYFNLVKRYGGVPIV TEVQQYTGPEDLYGLQVSRDKEQEVWDFILTELDESALELPETRESVERTRATRYAAYALQSRAALYAASIAKYGKVQLN GIVGVNSDDANAYWAKSIEAADKVINSGKYTLYNQYADRVENFRNMFLEKRGCSEFIFWKEFLATDLGHSWDLLNVPFSF VQNGYGCGQNPTLDLIEAFEYKDGSDGTLKLKDASGNYIKYDSPLDLFKDKDPRLRATFYLPMDECRGGIVEIRRGIYDA SKSGDARFITSNNVNEYYGEEGNQMKILGKDGVWDTGDVGKTGFYTKKFSDEGVMDISGNKSDAPWPVFRLAEMYLNKAE AAMELGKTGDAATALNMVRERAGIRTLSAGEVSLDRIRNERRVELAYENHRHWDLKRWHIAHIKMADFPTMALYPWYIWG EGKYIFTTGKAPKPNKVFLERNYYIKIKDSDMGSNPMLAPNNPGF
Sequences:
>Translated_605_residues MRRTIIYSLCCASLLLSSCDLDVPVTDRLPDEEVWKDDNLITGVFSRLYNQMQMEHNSTYFEGWDVWNVSLVTASDEGTG AYQAGDLGTGDVARANFNDEWFGLWEDGFKAVRATNLVLQELNAAEMPESKRQQLIAEARFIRAFHYFNLVKRYGGVPIV TEVQQYTGPEDLYGLQVSRDKEQEVWDFILTELDESALELPETRESVERTRATRYAAYALQSRAALYAASIAKYGKVQLN GIVGVNSDDANAYWAKSIEAADKVINSGKYTLYNQYADRVENFRNMFLEKRGCSEFIFWKEFLATDLGHSWDLLNVPFSF VQNGYGCGQNPTLDLIEAFEYKDGSDGTLKLKDASGNYIKYDSPLDLFKDKDPRLRATFYLPMDECRGGIVEIRRGIYDA SKSGDARFITSNNVNEYYGEEGNQMKILGKDGVWDTGDVGKTGFYTKKFSDEGVMDISGNKSDAPWPVFRLAEMYLNKAE AAMELGKTGDAATALNMVRERAGIRTLSAGEVSLDRIRNERRVELAYENHRHWDLKRWHIAHIKMADFPTMALYPWYIWG EGKYIFTTGKAPKPNKVFLERNYYIKIKDSDMGSNPMLAPNNPGF >Mature_605_residues MRRTIIYSLCCASLLLSSCDLDVPVTDRLPDEEVWKDDNLITGVFSRLYNQMQMEHNSTYFEGWDVWNVSLVTASDEGTG AYQAGDLGTGDVARANFNDEWFGLWEDGFKAVRATNLVLQELNAAEMPESKRQQLIAEARFIRAFHYFNLVKRYGGVPIV TEVQQYTGPEDLYGLQVSRDKEQEVWDFILTELDESALELPETRESVERTRATRYAAYALQSRAALYAASIAKYGKVQLN GIVGVNSDDANAYWAKSIEAADKVINSGKYTLYNQYADRVENFRNMFLEKRGCSEFIFWKEFLATDLGHSWDLLNVPFSF VQNGYGCGQNPTLDLIEAFEYKDGSDGTLKLKDASGNYIKYDSPLDLFKDKDPRLRATFYLPMDECRGGIVEIRRGIYDA SKSGDARFITSNNVNEYYGEEGNQMKILGKDGVWDTGDVGKTGFYTKKFSDEGVMDISGNKSDAPWPVFRLAEMYLNKAE AAMELGKTGDAATALNMVRERAGIRTLSAGEVSLDRIRNERRVELAYENHRHWDLKRWHIAHIKMADFPTMALYPWYIWG EGKYIFTTGKAPKPNKVFLERNYYIKIKDSDMGSNPMLAPNNPGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68817; Mature: 68817
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTIIYSLCCASLLLSSCDLDVPVTDRLPDEEVWKDDNLITGVFSRLYNQMQMEHNSTY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCE FEGWDVWNVSLVTASDEGTGAYQAGDLGTGDVARANFNDEWFGLWEDGFKAVRATNLVLQ ECCEEEEEEEEEEECCCCCCCEECCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHH ELNAAEMPESKRQQLIAEARFIRAFHYFNLVKRYGGVPIVTEVQQYTGPEDLYGLQVSRD HCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHEEEEECCC KEQEVWDFILTELDESALELPETRESVERTRATRYAAYALQSRAALYAASIAKYGKVQLN CHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GIVGVNSDDANAYWAKSIEAADKVINSGKYTLYNQYADRVENFRNMFLEKRGCSEFIFWK EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHH EFLATDLGHSWDLLNVPFSFVQNGYGCGQNPTLDLIEAFEYKDGSDGTLKLKDASGNYIK HHHHHHCCCCCCEECCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEE YDSPLDLFKDKDPRLRATFYLPMDECRGGIVEIRRGIYDASKSGDARFITSNNVNEYYGE ECCCHHHHCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHCC EGNQMKILGKDGVWDTGDVGKTGFYTKKFSDEGVMDISGNKSDAPWPVFRLAEMYLNKAE CCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH AAMELGKTGDAATALNMVRERAGIRTLSAGEVSLDRIRNERRVELAYENHRHWDLKRWHI HHHHHCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEE AHIKMADFPTMALYPWYIWGEGKYIFTTGKAPKPNKVFLERNYYIKIKDSDMGSNPMLAP EEEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCCC NNPGF CCCCC >Mature Secondary Structure MRRTIIYSLCCASLLLSSCDLDVPVTDRLPDEEVWKDDNLITGVFSRLYNQMQMEHNSTY CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCE FEGWDVWNVSLVTASDEGTGAYQAGDLGTGDVARANFNDEWFGLWEDGFKAVRATNLVLQ ECCEEEEEEEEEEECCCCCCCEECCCCCCCCEEECCCCCCCEEEHHHHHHHHHHHHHHHH ELNAAEMPESKRQQLIAEARFIRAFHYFNLVKRYGGVPIVTEVQQYTGPEDLYGLQVSRD HCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCHHEEEEECCC KEQEVWDFILTELDESALELPETRESVERTRATRYAAYALQSRAALYAASIAKYGKVQLN CHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE GIVGVNSDDANAYWAKSIEAADKVINSGKYTLYNQYADRVENFRNMFLEKRGCSEFIFWK EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHH EFLATDLGHSWDLLNVPFSFVQNGYGCGQNPTLDLIEAFEYKDGSDGTLKLKDASGNYIK HHHHHHCCCCCCEECCCHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCEEE YDSPLDLFKDKDPRLRATFYLPMDECRGGIVEIRRGIYDASKSGDARFITSNNVNEYYGE ECCCHHHHCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHCC EGNQMKILGKDGVWDTGDVGKTGFYTKKFSDEGVMDISGNKSDAPWPVFRLAEMYLNKAE CCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH AAMELGKTGDAATALNMVRERAGIRTLSAGEVSLDRIRNERRVELAYENHRHWDLKRWHI HHHHHCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEE AHIKMADFPTMALYPWYIWGEGKYIFTTGKAPKPNKVFLERNYYIKIKDSDMGSNPMLAP EEEEECCCCCEEEEEEEEEECCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCCC NNPGF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA