| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009713
Identifier: 150009713
GI number: 150009713
Start: 3768254
End: 3770959
Strand: Direct
Name: 150009713
Synonym: BDI_3128
Alternate gene names: NA
Gene position: 3768254-3770959 (Clockwise)
Preceding gene: 150009712
Following gene: 150009714
Centisome position: 78.32
GC content: 38.91
Gene sequence:
>2706_bases ATGAAAAATCGTATATTATTAGTTTTGTGTTTATTATCTTTTTATCTCTCGTCAGAGGCGCAAAAAGATAATTATGGAGC AGGTGCTGCCAATGTTCGTTTTATTCCCTCGAAAGGCTTGTTGGGTGGACGTACCGATTTTGATTATTTGAAACTGGAGA ATCATCCGGGTAATAGTGGTGTCCCATTGGGGGGAATTGGAGTTGGAAATGTTGAATTTGCTCCGGATGGTCGTTTCGCA CGTATTGGTTTGAATAATATTCATTTGCCGATTCGTAAAAGTACAGCATCTTTTTTCTCCTTATGGTATAAAGGGGCAAA AGAAACCGCAGTTGTGAGGTTAGTTCGTGATTCTTTACCTCAGTATGGGTTATTGGGTGTCGAAGATATTTATTATACAG GACTATTTCCACGGGTAGAGATGGATTTTGGGAATTCTATTCCTGGAATAAATGCGACGATACGTGCTTTTTCCCCGTTG ATTCCGCATGATGTGAAGAATTCTAGTTTACCTGTTGTTTTCTTTGATGTAGATTTGGTTTCGCAAGAAGGGGGAGAGGT CTCTATTGCATTTTCCTGGGAAGATTTTATTGGAAGGGGGATAAAAGAACCAGATGATATTAAAGGAATGGATGGGCAAT TATTCGGACAGGAGCGTAATAGTTTGTGTAATGGGGAGGCTTGGCCTGAGCGTCCATTAGAACAAACCTATTCGGAATCT TGGAGTTGTGGGAAGATGCAGGGAATACGTCAATTCGCTTCGGGTCCGTTAAAACCTAAACGTGCGAATTTTCAAAACTA TGTTAATGAAGTCGCCGTATTAGCGGAATCTAGAGAAGATGTGGAAGTATCGGTATTACCCTCATTTAATATAAAAGAGA CTCATGAGGCTTGGGACTTGTTTAAGCAAGAAGGACGTTTTGAGGATATATCCAAGGATGTTTCCTTATTAAGTATTCCG GGTAAACAGATGGGAGGTAGTGCTGTTGCGTTAAAAACAAAATTGAAGGCCAAAGAAAAGAAGACCGTTCGTTTCATGTT AGTTTGGTTTTATCCGGAGATGATGATTGACCGGGAAAATGACCCGTTAGAATATTATTGGGTTGGGGGTAGTGACTATG GGCGGTATTTCCATAATTATTTCAATCGTTTAGAACAATTGGTTGATTATGGATACGGAAATCGTGAGAGATTTAGGGAA AAAACAACAGAATGGCAGTTGCCTGTCTTGAATAGTACCATGCCAGATTGGTATAAGTTTAAGCTGATTAATAGCGGTTA TGTGATCTATACAAATATGATTTTAAATAAGAAAGGAGATGTAACTGTAAATGAAGGAGGTATGGGTGGATTGGCCGGAA CGATGGATCAACGAATTTCATCTCATCCATTCTATCAGAAATTTTTCACTCAACTAGATCGTTCTGAGATGATGATATTC GCTGACGCTCAGCAATCAAAAGGTAATATTACCCATTTTATCGGTCATTATTATTTTGGTATGGGAACTGTTGGCGGACG TATACCCACAGAGGATGGCTGGATGATTGATAATACGGGTGGTTGGATTATCCAACTGGTAAAAGATTATGAACAGACAG GAGATTTTCATTATTTAAGTCGTTATGCTGGGAGAGTGTATAATGGTATGGACTTTTTAAAGTCATTAATGCCAGAAGGC CTCAACATTCCTATAGGAGGAACAACTTATGATGATTTTACACATCCACCTGTGTATAGTTATGGAGCAAGTATTTATTT AGCGACGTTAAGAGCAGCGCAGGTTGTTGCTCAAGCGATGAAAGATACTGTTCGTGAAAATGAATATAAAGAACAATTTG ATAAAACCCAGAAAGATATGATTCGTCTATTATGGAATGGGCGGTTCTTTTCTTATGGTTGTGAATTGGATGGCTCAGGC AGGAAAGATAATCTCTTATTCACTGGACAGTTGGGAGGACAATTTGTGAGTCGTTATTGTGGTTGGGGAGATGTTATTCC GATGGAGATGACGAAAGCCTCATTGGTCTCACAATTTAAGATTTCATTGTCTAAGACTCCGGATTATTATGCTAATAAAG TCTGGGATATTACCCTAAATAGAGGGATAGATAATAGAGGTTCGCAATGTTGGCCATTTTATTTAGAAAGTTATACAGGA TATACTGCATGGCAAGCAGGATATTGTCAGGATGCTTTAGATATAATGAAACACATTCAACTCGTTCATTTGAGACAGGG ATGGACTTGGTGTCAGAATCTATGGAATCCGGCAGAGCTTTCATATATGTCAGCACCTGTAGTTTGGTTTTCGACAGATG TGTTAGCCGGAGCAGGCCTGAACGTACCACGTCAAGAATTGCGTTTAGCGCCTATTGTGGAAGGGAAAGATAAAGTTGTA CTTCCGTTGTATTATCCGACGTTTTGGGCAACACTTTCATTAGATCCAATTCGGAAAAAAGCATTATTAGAGATTACTAA AACATTTGGAGATGATGAGGTGGTACTATCGAAAATTGTGTCAGTTCCAAATGGTGTGGCTGCGGAGCATAAGCGAGAAA TTGCGATTCCTGCATTTACTGTTGAAAAAGGTAAAATGCTAGATTTATCTCCCTATTGGGATCAAATAGTACAGAGAAAT ACAGAAAAATCAATTTTGCCTCGTGCTGATGAAGTGGATTTTTTAATGTTAGATTATAAAGAATAG
Upstream 100 bases:
>100_bases GCGAATCCGAAATTAATTCAAAATCCGGGGTATTAATTGGATAGAAGAACCTGATGCTGAAACTGATGAGTCAGGTTCTT CTTTTAAATGACTGTAAAAA
Downstream 100 bases:
>100_bases AGAGACTTGACTTTTACTTTGTCTGGCTCATTAATTTTAATGAGCATAAGTTATGTTGGAGAAAATATGGCAATATTGCG TATGCATAATCTGTAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 901; Mature: 901
Protein sequence:
>901_residues MKNRILLVLCLLSFYLSSEAQKDNYGAGAANVRFIPSKGLLGGRTDFDYLKLENHPGNSGVPLGGIGVGNVEFAPDGRFA RIGLNNIHLPIRKSTASFFSLWYKGAKETAVVRLVRDSLPQYGLLGVEDIYYTGLFPRVEMDFGNSIPGINATIRAFSPL IPHDVKNSSLPVVFFDVDLVSQEGGEVSIAFSWEDFIGRGIKEPDDIKGMDGQLFGQERNSLCNGEAWPERPLEQTYSES WSCGKMQGIRQFASGPLKPKRANFQNYVNEVAVLAESREDVEVSVLPSFNIKETHEAWDLFKQEGRFEDISKDVSLLSIP GKQMGGSAVALKTKLKAKEKKTVRFMLVWFYPEMMIDRENDPLEYYWVGGSDYGRYFHNYFNRLEQLVDYGYGNRERFRE KTTEWQLPVLNSTMPDWYKFKLINSGYVIYTNMILNKKGDVTVNEGGMGGLAGTMDQRISSHPFYQKFFTQLDRSEMMIF ADAQQSKGNITHFIGHYYFGMGTVGGRIPTEDGWMIDNTGGWIIQLVKDYEQTGDFHYLSRYAGRVYNGMDFLKSLMPEG LNIPIGGTTYDDFTHPPVYSYGASIYLATLRAAQVVAQAMKDTVRENEYKEQFDKTQKDMIRLLWNGRFFSYGCELDGSG RKDNLLFTGQLGGQFVSRYCGWGDVIPMEMTKASLVSQFKISLSKTPDYYANKVWDITLNRGIDNRGSQCWPFYLESYTG YTAWQAGYCQDALDIMKHIQLVHLRQGWTWCQNLWNPAELSYMSAPVVWFSTDVLAGAGLNVPRQELRLAPIVEGKDKVV LPLYYPTFWATLSLDPIRKKALLEITKTFGDDEVVLSKIVSVPNGVAAEHKREIAIPAFTVEKGKMLDLSPYWDQIVQRN TEKSILPRADEVDFLMLDYKE
Sequences:
>Translated_901_residues MKNRILLVLCLLSFYLSSEAQKDNYGAGAANVRFIPSKGLLGGRTDFDYLKLENHPGNSGVPLGGIGVGNVEFAPDGRFA RIGLNNIHLPIRKSTASFFSLWYKGAKETAVVRLVRDSLPQYGLLGVEDIYYTGLFPRVEMDFGNSIPGINATIRAFSPL IPHDVKNSSLPVVFFDVDLVSQEGGEVSIAFSWEDFIGRGIKEPDDIKGMDGQLFGQERNSLCNGEAWPERPLEQTYSES WSCGKMQGIRQFASGPLKPKRANFQNYVNEVAVLAESREDVEVSVLPSFNIKETHEAWDLFKQEGRFEDISKDVSLLSIP GKQMGGSAVALKTKLKAKEKKTVRFMLVWFYPEMMIDRENDPLEYYWVGGSDYGRYFHNYFNRLEQLVDYGYGNRERFRE KTTEWQLPVLNSTMPDWYKFKLINSGYVIYTNMILNKKGDVTVNEGGMGGLAGTMDQRISSHPFYQKFFTQLDRSEMMIF ADAQQSKGNITHFIGHYYFGMGTVGGRIPTEDGWMIDNTGGWIIQLVKDYEQTGDFHYLSRYAGRVYNGMDFLKSLMPEG LNIPIGGTTYDDFTHPPVYSYGASIYLATLRAAQVVAQAMKDTVRENEYKEQFDKTQKDMIRLLWNGRFFSYGCELDGSG RKDNLLFTGQLGGQFVSRYCGWGDVIPMEMTKASLVSQFKISLSKTPDYYANKVWDITLNRGIDNRGSQCWPFYLESYTG YTAWQAGYCQDALDIMKHIQLVHLRQGWTWCQNLWNPAELSYMSAPVVWFSTDVLAGAGLNVPRQELRLAPIVEGKDKVV LPLYYPTFWATLSLDPIRKKALLEITKTFGDDEVVLSKIVSVPNGVAAEHKREIAIPAFTVEKGKMLDLSPYWDQIVQRN TEKSILPRADEVDFLMLDYKE >Mature_901_residues MKNRILLVLCLLSFYLSSEAQKDNYGAGAANVRFIPSKGLLGGRTDFDYLKLENHPGNSGVPLGGIGVGNVEFAPDGRFA RIGLNNIHLPIRKSTASFFSLWYKGAKETAVVRLVRDSLPQYGLLGVEDIYYTGLFPRVEMDFGNSIPGINATIRAFSPL IPHDVKNSSLPVVFFDVDLVSQEGGEVSIAFSWEDFIGRGIKEPDDIKGMDGQLFGQERNSLCNGEAWPERPLEQTYSES WSCGKMQGIRQFASGPLKPKRANFQNYVNEVAVLAESREDVEVSVLPSFNIKETHEAWDLFKQEGRFEDISKDVSLLSIP GKQMGGSAVALKTKLKAKEKKTVRFMLVWFYPEMMIDRENDPLEYYWVGGSDYGRYFHNYFNRLEQLVDYGYGNRERFRE KTTEWQLPVLNSTMPDWYKFKLINSGYVIYTNMILNKKGDVTVNEGGMGGLAGTMDQRISSHPFYQKFFTQLDRSEMMIF ADAQQSKGNITHFIGHYYFGMGTVGGRIPTEDGWMIDNTGGWIIQLVKDYEQTGDFHYLSRYAGRVYNGMDFLKSLMPEG LNIPIGGTTYDDFTHPPVYSYGASIYLATLRAAQVVAQAMKDTVRENEYKEQFDKTQKDMIRLLWNGRFFSYGCELDGSG RKDNLLFTGQLGGQFVSRYCGWGDVIPMEMTKASLVSQFKISLSKTPDYYANKVWDITLNRGIDNRGSQCWPFYLESYTG YTAWQAGYCQDALDIMKHIQLVHLRQGWTWCQNLWNPAELSYMSAPVVWFSTDVLAGAGLNVPRQELRLAPIVEGKDKVV LPLYYPTFWATLSLDPIRKKALLEITKTFGDDEVVLSKIVSVPNGVAAEHKREIAIPAFTVEKGKMLDLSPYWDQIVQRN TEKSILPRADEVDFLMLDYKE
Specific function: Unknown
COG id: COG4354
COG function: function code G; Predicted bile acid beta-glucosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102275; Mature: 102275
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRILLVLCLLSFYLSSEAQKDNYGAGAANVRFIPSKGLLGGRTDFDYLKLENHPGNSG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCC VPLGGIGVGNVEFAPDGRFARIGLNNIHLPIRKSTASFFSLWYKGAKETAVVRLVRDSLP CCCCCCCCCCEEECCCCCEEEECCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCC QYGLLGVEDIYYTGLFPRVEMDFGNSIPGINATIRAFSPLIPHDVKNSSLPVVFFDVDLV CCCCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEE SQEGGEVSIAFSWEDFIGRGIKEPDDIKGMDGQLFGQERNSLCNGEAWPERPLEQTYSES CCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCHHHHHHHCC WSCGKMQGIRQFASGPLKPKRANFQNYVNEVAVLAESREDVEVSVLPSFNIKETHEAWDL CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH FKQEGRFEDISKDVSLLSIPGKQMGGSAVALKTKLKAKEKKTVRFMLVWFYPEMMIDREN HHHCCCHHHHHCCCEEEECCCHHCCCCEEEEEHHHHHCCCCEEEEEEEEECCHHEECCCC DPLEYYWVGGSDYGRYFHNYFNRLEQLVDYGYGNRERFREKTTEWQLPVLNSTMPDWYKF CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECEECCCCCCCCEEE KLINSGYVIYTNMILNKKGDVTVNEGGMGGLAGTMDQRISSHPFYQKFFTQLDRSEMMIF EEECCCEEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEE ADAQQSKGNITHFIGHYYFGMGTVGGRIPTEDGWMIDNTGGWIIQLVKDYEQTGDFHYLS EECCCCCCCHHEEHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHH RYAGRVYNGMDFLKSLMPEGLNIPIGGTTYDDFTHPPVYSYGASIYLATLRAAQVVAQAM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH KDTVRENEYKEQFDKTQKDMIRLLWNGRFFSYGCELDGSGRKDNLLFTGQLGGQFVSRYC HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEECCCCCCCCEEEEECCCHHHHHHHC GWGDVIPMEMTKASLVSQFKISLSKTPDYYANKVWDITLNRGIDNRGSQCWPFYLESYTG CCCCCCCHHHHHHHHHHHHHHEECCCCCHHHCEEEEEEEECCCCCCCCCCCHHHHHCCCC YTAWQAGYCQDALDIMKHIQLVHLRQGWTWCQNLWNPAELSYMSAPVVWFSTDVLAGAGL CCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCEEEEEHHHHCCCCC NVPRQELRLAPIVEGKDKVVLPLYYPTFWATLSLDPIRKKALLEITKTFGDDEVVLSKIV CCCHHHCEECCEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHH SVPNGVAAEHKREIAIPAFTVEKGKMLDLSPYWDQIVQRNTEKSILPRADEVDFLMLDYK HCCCCCCHHCCCEEECEEEEECCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEECC E C >Mature Secondary Structure MKNRILLVLCLLSFYLSSEAQKDNYGAGAANVRFIPSKGLLGGRTDFDYLKLENHPGNSG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCC VPLGGIGVGNVEFAPDGRFARIGLNNIHLPIRKSTASFFSLWYKGAKETAVVRLVRDSLP CCCCCCCCCCEEECCCCCEEEECCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCC QYGLLGVEDIYYTGLFPRVEMDFGNSIPGINATIRAFSPLIPHDVKNSSLPVVFFDVDLV CCCCCCCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEE SQEGGEVSIAFSWEDFIGRGIKEPDDIKGMDGQLFGQERNSLCNGEAWPERPLEQTYSES CCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCHHHHHHHCC WSCGKMQGIRQFASGPLKPKRANFQNYVNEVAVLAESREDVEVSVLPSFNIKETHEAWDL CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH FKQEGRFEDISKDVSLLSIPGKQMGGSAVALKTKLKAKEKKTVRFMLVWFYPEMMIDREN HHHCCCHHHHHCCCEEEECCCHHCCCCEEEEEHHHHHCCCCEEEEEEEEECCHHEECCCC DPLEYYWVGGSDYGRYFHNYFNRLEQLVDYGYGNRERFREKTTEWQLPVLNSTMPDWYKF CCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEECEECCCCCCCCEEE KLINSGYVIYTNMILNKKGDVTVNEGGMGGLAGTMDQRISSHPFYQKFFTQLDRSEMMIF EEECCCEEEEEEEEECCCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCEEEE ADAQQSKGNITHFIGHYYFGMGTVGGRIPTEDGWMIDNTGGWIIQLVKDYEQTGDFHYLS EECCCCCCCHHEEHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHH RYAGRVYNGMDFLKSLMPEGLNIPIGGTTYDDFTHPPVYSYGASIYLATLRAAQVVAQAM HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHH KDTVRENEYKEQFDKTQKDMIRLLWNGRFFSYGCELDGSGRKDNLLFTGQLGGQFVSRYC HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEECCCCCCCCEEEEECCCHHHHHHHC GWGDVIPMEMTKASLVSQFKISLSKTPDYYANKVWDITLNRGIDNRGSQCWPFYLESYTG CCCCCCCHHHHHHHHHHHHHHEECCCCCHHHCEEEEEEEECCCCCCCCCCCHHHHHCCCC YTAWQAGYCQDALDIMKHIQLVHLRQGWTWCQNLWNPAELSYMSAPVVWFSTDVLAGAGL CCEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCEEEEEHHHHCCCCC NVPRQELRLAPIVEGKDKVVLPLYYPTFWATLSLDPIRKKALLEITKTFGDDEVVLSKIV CCCHHHCEECCEECCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHH SVPNGVAAEHKREIAIPAFTVEKGKMLDLSPYWDQIVQRNTEKSILPRADEVDFLMLDYK HCCCCCCHHCCCEEECEEEEECCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEECC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA