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The map label for this gene is ribF [H]

Identifier: 150009685

GI number: 150009685

Start: 3717285

End: 3718205

Strand: Reverse

Name: ribF [H]

Synonym: BDI_3100

Alternate gene names: 150009685

Gene position: 3718205-3717285 (Counterclockwise)

Preceding gene: 150009706

Following gene: 150009684

Centisome position: 77.28

GC content: 45.49

Gene sequence:

>921_bases
ATGATTGTTGTAAGAGATTTTGACAGACTGAAAGGAAAGGAACTGGTGGCTACGATCGGATTTTTCGATGGTGTGCATCT
AGGACACCGTTTCTTAATCGACGAGATGAAAGAGATTGCCAAAGCACGTAACCTGCCATCGGCCGTAATCACCTTCCCGG
AACATCCCCGGGCCGTATTGCATGCGGATTACCAACCGAAGCTATTAAATTCTTTCGAGGAAAAGTTACAGCAATTAGAG
ACTACCGGAGTAGATTATTGCATCGTATTGGATTTTACGATCGAGCTATCCCGGCTCTCGGCCAAGGAATTCATTACCTC
TATTTTAGCGAAGAGCCTGCATGTAAAGACCTTATTGATCGGATATGACCATCGTTTCGGGCACGATCGGACGGATGGCT
TCGAGCAATATGTCGTTTATGGCACCGAATGTGGTATCGAGGTGCTGAAGGCATCTCCCTATGACGAAGGAAATACGGCC
GTCAGCTCTTCCGAAATCCGGAAATTACTTCAAGCCGGAAATGTAGCTGAAGCCGCTTATTTACTGACCTATCCCTATCA
ATTGCTGGGCCATATCGTCAGCGGCTATAAAGTGGGACGCACGCTAGGATTTCCCACGGCGAATATACGGGTAGATGAAC
CTTTTAAAGTCATTCCGGGTATTGGCGTATATGCCGTATGGGTGGAGGTGGAAGGCGAACGATATAAGGGAATGCTTTAT
ATCGGTGACCGTCCGACACTCAATAATGGGAAGGACATATCCATGGAGGTCAATATTCTGGATTTCTCCGGAGATATCTA
CAATGATAGCATTCGTGTCTCATTCGTTCAATACGTACGCGGAGACATCAAATTCGATTCCTTAGAAGAATTGAAAGCCC
AACTGGAGAAAGACAGATGCACCGTAAATAATTTATTATAA

Upstream 100 bases:

>100_bases
CAGTAAACATACACGTAAAGTATCCATATATAAGAACATGATTATTAAAAATTATCCCGTACATTTGTCTTTCGATTGGA
ATAGAAATGAATAAGGCGCA

Downstream 100 bases:

>100_bases
TATGGAAAGATATTACGAAGCGATTGATTTATTAAAAGGCATGATCTCCCGTCCGTCTTTCAGCCGGGACGAGACCGCCG
TAGCGGATTTCCTGCAAGCA

Product: putative riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MIVVRDFDRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPKLLNSFEEKLQQLE
TTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHRFGHDRTDGFEQYVVYGTECGIEVLKASPYDEGNTA
VSSSEIRKLLQAGNVAEAAYLLTYPYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGERYKGMLY
IGDRPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVNNLL

Sequences:

>Translated_306_residues
MIVVRDFDRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPKLLNSFEEKLQQLE
TTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHRFGHDRTDGFEQYVVYGTECGIEVLKASPYDEGNTA
VSSSEIRKLLQAGNVAEAAYLLTYPYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGERYKGMLY
IGDRPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVNNLL
>Mature_306_residues
MIVVRDFDRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVLHADYQPKLLNSFEEKLQQLE
TTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLIGYDHRFGHDRTDGFEQYVVYGTECGIEVLKASPYDEGNTA
VSSSEIRKLLQAGNVAEAAYLLTYPYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGERYKGMLY
IGDRPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRCTVNNLL

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=289, Percent_Identity=39.1003460207612, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 34508; Mature: 34508

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVRDFDRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVL
CEEEECHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEE
HADYQPKLLNSFEEKLQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLI
ECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCEEEEEE
GYDHRFGHDRTDGFEQYVVYGTECGIEVLKASPYDEGNTAVSSSEIRKLLQAGNVAEAAY
ECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
LLTYPYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGERYKGMLY
HHHHHHHHHHHHHCCHHCCCEECCCCCCEEECCCCEECCCCCEEEEEEEECCCEEEEEEE
IGDRPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRC
ECCCCCCCCCCEEEEEEEEEEECCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
TVNNLL
HHHCCC
>Mature Secondary Structure
MIVVRDFDRLKGKELVATIGFFDGVHLGHRFLIDEMKEIAKARNLPSAVITFPEHPRAVL
CEEEECHHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEE
HADYQPKLLNSFEEKLQQLETTGVDYCIVLDFTIELSRLSAKEFITSILAKSLHVKTLLI
ECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHCEEEEEE
GYDHRFGHDRTDGFEQYVVYGTECGIEVLKASPYDEGNTAVSSSEIRKLLQAGNVAEAAY
ECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHH
LLTYPYQLLGHIVSGYKVGRTLGFPTANIRVDEPFKVIPGIGVYAVWVEVEGERYKGMLY
HHHHHHHHHHHHHCCHHCCCEECCCCCCEEECCCCEECCCCCEEEEEEEECCCEEEEEEE
IGDRPTLNNGKDISMEVNILDFSGDIYNDSIRVSFVQYVRGDIKFDSLEELKAQLEKDRC
ECCCCCCCCCCEEEEEEEEEEECCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
TVNNLL
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]