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The map label for this gene is rnpA [H]

Identifier: 150009641

GI number: 150009641

Start: 3658664

End: 3659050

Strand: Direct

Name: rnpA [H]

Synonym: BDI_3055

Alternate gene names: 150009641

Gene position: 3658664-3659050 (Clockwise)

Preceding gene: 150009640

Following gene: 150009642

Centisome position: 76.04

GC content: 43.93

Gene sequence:

>387_bases
ATGACGACAAAAAGGTATACCCTTTCAAAAGAAGAACGCCTGTCGTGGAAACGTTACATTGACCTATTATTCGAAAAAGG
ACAATCGTTCGTGGCGTTTCCACTGCGGGTCGTTTATTTACCGATGGAGGAAGAGATGCCTGCCCGTGCTTCCTTCTTAG
TGAGTGTACCGAAGAAAAGATTTAAGAGAGCCGTAAAACGTAACTTGATCAAACGACAGGTACGTGAGGCTTACCGGGTT
CGTAAATATGATTTACTGGAACCGTTGGAAGCGAAGAATAAGGGCATGTTAATCGCTTTCCTGTACCTCGATAAAGAGAT
CCATCCGTACGCTGCGATGGAAAAGGCAATGAAGAAAGCGATCCATATCCTTCGGGATAAAGAATAA

Upstream 100 bases:

>100_bases
CGGGTCTGCGTTTGGACGTTGAGGCTCCCACGGTGGAAGCCCCTTCTATGACTGCTGCTTTGGATTTATATCTGAAAAAA
CAGCAAGACGGTAAAAAATA

Downstream 100 bases:

>100_bases
TGAGACGCTTTTTTACCACATTACTCTTATTGCCGGTTTATTTCTACAAATATTGTATCTCTCTTATGACACCGGCTTCG
TGCAGGTATACGCCCACTTG

Product: ribonuclease P

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5 [H]

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTTKRYTLSKEERLSWKRYIDLLFEKGQSFVAFPLRVVYLPMEEEMPARASFLVSVPKKRFKRAVKRNLIKRQVREAYRV
RKYDLLEPLEAKNKGMLIAFLYLDKEIHPYAAMEKAMKKAIHILRDKE

Sequences:

>Translated_128_residues
MTTKRYTLSKEERLSWKRYIDLLFEKGQSFVAFPLRVVYLPMEEEMPARASFLVSVPKKRFKRAVKRNLIKRQVREAYRV
RKYDLLEPLEAKNKGMLIAFLYLDKEIHPYAAMEKAMKKAIHILRDKE
>Mature_127_residues
TTKRYTLSKEERLSWKRYIDLLFEKGQSFVAFPLRVVYLPMEEEMPARASFLVSVPKKRFKRAVKRNLIKRQVREAYRVR
KYDLLEPLEAKNKGMLIAFLYLDKEIHPYAAMEKAMKKAIHILRDKE

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- InterPro:   IPR020539 [H]

Pfam domain/function: PF00825 Ribonuclease_P [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 15382; Mature: 15250

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKRYTLSKEERLSWKRYIDLLFEKGQSFVAFPLRVVYLPMEEEMPARASFLVSVPKKR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCHHH
FKRAVKRNLIKRQVREAYRVRKYDLLEPLEAKNKGMLIAFLYLDKEIHPYAAMEKAMKKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
IHILRDKE
HHHHCCCC
>Mature Secondary Structure 
TTKRYTLSKEERLSWKRYIDLLFEKGQSFVAFPLRVVYLPMEEEMPARASFLVSVPKKR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCHHH
FKRAVKRNLIKRQVREAYRVRKYDLLEPLEAKNKGMLIAFLYLDKEIHPYAAMEKAMKKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
IHILRDKE
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA