| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009640
Identifier: 150009640
GI number: 150009640
Start: 3657903
End: 3658664
Strand: Direct
Name: 150009640
Synonym: BDI_3054
Alternate gene names: NA
Gene position: 3657903-3658664 (Clockwise)
Preceding gene: 150009639
Following gene: 150009641
Centisome position: 76.03
GC content: 41.86
Gene sequence:
>762_bases ATGGCATTGAATATTAAAAAATTATTGGTATCACAACCGAAGCCTGCATCGGAGAAATCACCATATTTCGATATTGCAGA AAAATACGGTGTGGAAATAGATTTCCGCCCGTTCATCAAGGTTGAACCTTTATCTTCCAAGGAGTTCAGGCAGCAACGAA TCTCGGTTTTGGATCATACCGCCGTTATTTTTACGGCTCGTACGGCTATCGATCATTTCTTTCATTTATGCGAGGAATTG CGTGTGGCTATCCCGGAAACGATGAAGTATTTCTGTATGACAGAGGCGATCGCTGTTTATCTCCAGAAGTATATCGTTTA TAGAAAACGTAAGATTTTTTATGGTCAGACCGGTAAGGCAGATGATTTGGTGACTGTTATCGCCAAACATGCGAAGGAGA AATACCTAGTACCTGTTTCCGATGTACATAAAGATGATCTATTCGCTTTGTTAGACGCGAAGAAAATCAACTATACGAAA GCGGTGATGTTCCGTACGGTGAGCAATGATTTCGCGAAGGACGAGAAATTCGATTATGATATGTTGGTTTTCTTTAGTCC GTCGGGTATCTCTTCCTTATTGAAGAACTTCCCGGATTTCAAACAAGACGATATAAAGATCGGCTGTTTTGGCCCTACTA CGGCAAAGGCTGTTAAAGATGCGGGTCTGCGTTTGGACGTTGAGGCTCCCACGGTGGAAGCCCCTTCTATGACTGCTGCT TTGGATTTATATCTGAAAAAACAGCAAGACGGTAAAAAATAA
Upstream 100 bases:
>100_bases TATATATTAGTTTGTACCTTTGCGGCCAAGAAATATTGCCTTTAGTTTTTCTGTATGAAGGCATTATTTATTTGTATAAC TTTATCGAGTCAAGTACTCT
Downstream 100 bases:
>100_bases TGACGACAAAAAGGTATACCCTTTCAAAAGAAGAACGCCTGTCGTGGAAACGTTACATTGACCTATTATTCGAAAAAGGA CAATCGTTCGTGGCGTTTCC
Product: uroporphyrinogen-III synthase
Products: NA
Alternate protein names: Uroporphyrinogen-III Synthase HemD; UroporphyrinogeN-Iii Synthase; Uroporphyrinogen-Iii Synthase
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MALNIKKLLVSQPKPASEKSPYFDIAEKYGVEIDFRPFIKVEPLSSKEFRQQRISVLDHTAVIFTARTAIDHFFHLCEEL RVAIPETMKYFCMTEAIAVYLQKYIVYRKRKIFYGQTGKADDLVTVIAKHAKEKYLVPVSDVHKDDLFALLDAKKINYTK AVMFRTVSNDFAKDEKFDYDMLVFFSPSGISSLLKNFPDFKQDDIKIGCFGPTTAKAVKDAGLRLDVEAPTVEAPSMTAA LDLYLKKQQDGKK
Sequences:
>Translated_253_residues MALNIKKLLVSQPKPASEKSPYFDIAEKYGVEIDFRPFIKVEPLSSKEFRQQRISVLDHTAVIFTARTAIDHFFHLCEEL RVAIPETMKYFCMTEAIAVYLQKYIVYRKRKIFYGQTGKADDLVTVIAKHAKEKYLVPVSDVHKDDLFALLDAKKINYTK AVMFRTVSNDFAKDEKFDYDMLVFFSPSGISSLLKNFPDFKQDDIKIGCFGPTTAKAVKDAGLRLDVEAPTVEAPSMTAA LDLYLKKQQDGKK >Mature_252_residues ALNIKKLLVSQPKPASEKSPYFDIAEKYGVEIDFRPFIKVEPLSSKEFRQQRISVLDHTAVIFTARTAIDHFFHLCEELR VAIPETMKYFCMTEAIAVYLQKYIVYRKRKIFYGQTGKADDLVTVIAKHAKEKYLVPVSDVHKDDLFALLDAKKINYTKA VMFRTVSNDFAKDEKFDYDMLVFFSPSGISSLLKNFPDFKQDDIKIGCFGPTTAKAVKDAGLRLDVEAPTVEAPSMTAAL DLYLKKQQDGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28846; Mature: 28715
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNIKKLLVSQPKPASEKSPYFDIAEKYGVEIDFRPFIKVEPLSSKEFRQQRISVLDHT CCCCHHHHHHCCCCCCCCCCCCCHHHHHHCCEECCCCCEEECCCCHHHHHHHHHHHHHHH AVIFTARTAIDHFFHLCEELRVAIPETMKYFCMTEAIAVYLQKYIVYRKRKIFYGQTGKA HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC DDLVTVIAKHAKEKYLVPVSDVHKDDLFALLDAKKINYTKAVMFRTVSNDFAKDEKFDYD HHHHHHHHHHHHCCEECCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCE MLVFFSPSGISSLLKNFPDFKQDDIKIGCFGPTTAKAVKDAGLRLDVEAPTVEAPSMTAA EEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCHHHH LDLYLKKQQDGKK HHHHHHCCCCCCC >Mature Secondary Structure ALNIKKLLVSQPKPASEKSPYFDIAEKYGVEIDFRPFIKVEPLSSKEFRQQRISVLDHT CCCHHHHHHCCCCCCCCCCCCCHHHHHHCCEECCCCCEEECCCCHHHHHHHHHHHHHHH AVIFTARTAIDHFFHLCEELRVAIPETMKYFCMTEAIAVYLQKYIVYRKRKIFYGQTGKA HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC DDLVTVIAKHAKEKYLVPVSDVHKDDLFALLDAKKINYTKAVMFRTVSNDFAKDEKFDYD HHHHHHHHHHHHCCEECCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCE MLVFFSPSGISSLLKNFPDFKQDDIKIGCFGPTTAKAVKDAGLRLDVEAPTVEAPSMTAA EEEEECCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCHHHH LDLYLKKQQDGKK HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA