| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009622
Identifier: 150009622
GI number: 150009622
Start: 3634800
End: 3636467
Strand: Direct
Name: 150009622
Synonym: BDI_3036
Alternate gene names: NA
Gene position: 3634800-3636467 (Clockwise)
Preceding gene: 150009619
Following gene: 150009624
Centisome position: 75.55
GC content: 47.96
Gene sequence:
>1668_bases ATGAAAAAGAAATTTATATATAGCTTTATGATAGCCGCTGCCGCCGCGGCATTTTCTTCCTGTTCTAATTTTTTGGAAGA GCGTCCTACAGACGCGTTTGATGAGGAGACCGCGTTCCAAAGCCCTACGTTGGTCTATGTAAACACGGTTGCGAGCTTGT ACAATAATATGTTCAAGATCATGGGTAACGACCGTCATGTATATGACTTGAATACCTTCTCCAGCGATGAGGCTATGCTT CCTTGCCGTATCGGTGACTGGGAAGATGGCGGTTTATGGCAGAATATTTTCTTACACCGTTGGGGTACGATGAATGATTT GACCAAGAACTCTTGGGATTTCTTGTATGAGCAGATCGGAAAATGTAACCAGAGTGTTGATAAGTTGCAAGCCTTTGCCG AGGAACAACCGGACGTGGAATATTTCAAGGTTTATCTGGAAGAGGTCCGTGCGGTCCGTGCGTTTTTCTATTATGAGTTG TTGGATTTGTTCGCTCGTGTTCCGTTGGTAACTTCCTCTACGACACCGATGTCTGAGGTAAAGCAATCTGAGCGTAGCGT TGTATTTAACTTTGTCCGTTCGGAGTTGGAGGAGGCGTTGCCTTATCTTTCAGATAACCGCAGTAACCAAAAAGGTGAGT ATTACGGACGTATTACCAAGCCGGTGGCTTATATGATCTTGGCTAAGTTGGCGTTGAATGCGGAGGTTTATGCGGACGAC AATTGGACGGACGGCAATCGTCCGGCTGGAAAGAACATCAAGTTTACCGTTGACGGTAAAGAGATGAACGCTTGGGAAGC TACGATCGCTTATGTGGATAAGCTGGAGGCTTTGGGCTATAAATTGCAGGGAAACTTCTCGGAGAATTTCGCCGTAGCGA ACGAGACCTCGGTTGAGAATATTTTCACGGTTCCTATGGACCCGGTCGCTTATCCGGACGCTAAGGACTACAATTTGGTA CGTACCCGCCATTATGATCATGCAACCGCTTACGGCCAATCCGGATGGAATGGCTCTTGCGCTACGGTGAAGGCGATGAA CGTGTTTAAGTTCGGTACGGCGGATGAGGATCCTCGTTGTAAGCTTACTTATTTTACGGGCGAGGTAACCGGTCCGGACG GAAAGACGATCTATACGGAATGGGACGGACAGAAAGTGCCTTTGAAATATGAGCCGAACGCCCCGAAGGTATATATGGAT GCCTCCGATGGTTTGTTGGTGAAGACCGCCGGAGCTCGTATGGCTAAATATGAGTTCGACCAGAATGCTCAGGATGGTGG AAACTTGCATGGAAATGACTGCGTGATCTTCCGTTTCGCCGACGCGTTGCTGATGAAGGCGGAAGCCAAGATTCGTCTGG GACAGAATGGAGACGATGAGGTGAACCAAGTTCGTAACCGTGTAGGCGCCAAACCGCTACAAAACGTAACGCTGGATACG CTATTAGACGAGCGTATGCTTGAATTAGCTTGGGAAGGCGTACGCCGGCAGGATTTGATCCGTTTCGGCAAGTTTACCGA GGCTACGGTAGACCGCTATGTAGGCGTGAAACATTTCGCCAGCTCGCTGGATTATCAAGAGGATAAGACGGGATATACAA CGGTATTCTCCATCTATGCCGATATCCTTAGCCTGAATCCTAACTTGACACAGAATCCGGGATATTAA
Upstream 100 bases:
>100_bases GATTATAATGACCTAGGTATGGATAACAAACGTTTCTATCCGTTATCCCGTACGTATTCATTAGGTTTGAGTGTTAACTT CTAAATCCATTTAAAGAGTC
Downstream 100 bases:
>100_bases TACGATTCATTTTAATCTTTAAGGCTTTATCAGGGGGCTGTCCGTTATTGGGCAGCCCTTTCTTCTTTTTGCTTGATTTT CCCTAGTATCTTCGGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; SusD Family Protein; Lipoprotein; SusD Outer Membrane Protein; RagB/SusD Family Protein
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKIMGNDRHVYDLNTFSSDEAML PCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIGKCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYEL LDLFARVPLVTSSTTPMSEVKQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVENIFTVPMDPVAYPDAKDYNLV RTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRCKLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMD ASDGLLVKTAGARMAKYEFDQNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYADILSLNPNLTQNPGY
Sequences:
>Translated_555_residues MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKIMGNDRHVYDLNTFSSDEAML PCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIGKCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYEL LDLFARVPLVTSSTTPMSEVKQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVENIFTVPMDPVAYPDAKDYNLV RTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRCKLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMD ASDGLLVKTAGARMAKYEFDQNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYADILSLNPNLTQNPGY >Mature_555_residues MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKIMGNDRHVYDLNTFSSDEAML PCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIGKCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYEL LDLFARVPLVTSSTTPMSEVKQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVENIFTVPMDPVAYPDAKDYNLV RTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRCKLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMD ASDGLLVKTAGARMAKYEFDQNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYADILSLNPNLTQNPGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62956; Mature: 62956
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHH MGNDRHVYDLNTFSSDEAMLPCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIG CCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH KCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYELLDLFARVPLVTSSTTPMSEV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH KQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCEEEECC NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVEN CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCE IFTVPMDPVAYPDAKDYNLVRTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRC EEECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCE KLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMDASDGLLVKTAGARMAKYEFD EEEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCEEEECC QNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT CCCCCCCCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCHHCCHHHH LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYA HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH DILSLNPNLTQNPGY HHHHCCCCCCCCCCC >Mature Secondary Structure MKKKFIYSFMIAAAAAAFSSCSNFLEERPTDAFDEETAFQSPTLVYVNTVASLYNNMFKI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHH MGNDRHVYDLNTFSSDEAMLPCRIGDWEDGGLWQNIFLHRWGTMNDLTKNSWDFLYEQIG CCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHH KCNQSVDKLQAFAEEQPDVEYFKVYLEEVRAVRAFFYYELLDLFARVPLVTSSTTPMSEV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHH KQSERSVVFNFVRSELEEALPYLSDNRSNQKGEYYGRITKPVAYMILAKLALNAEVYADD HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCEEEECC NWTDGNRPAGKNIKFTVDGKEMNAWEATIAYVDKLEALGYKLQGNFSENFAVANETSVEN CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEECCCCCCCE IFTVPMDPVAYPDAKDYNLVRTRHYDHATAYGQSGWNGSCATVKAMNVFKFGTADEDPRC EEECCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCE KLTYFTGEVTGPDGKTIYTEWDGQKVPLKYEPNAPKVYMDASDGLLVKTAGARMAKYEFD EEEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEECCCCCEEEECC QNAQDGGNLHGNDCVIFRFADALLMKAEAKIRLGQNGDDEVNQVRNRVGAKPLQNVTLDT CCCCCCCCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCHHCCHHHH LLDERMLELAWEGVRRQDLIRFGKFTEATVDRYVGVKHFASSLDYQEDKTGYTTVFSIYA HHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH DILSLNPNLTQNPGY HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA