| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is obg [H]
Identifier: 150009607
GI number: 150009607
Start: 3615128
End: 3615907
Strand: Direct
Name: obg [H]
Synonym: BDI_3020
Alternate gene names: 150009607
Gene position: 3615128-3615907 (Clockwise)
Preceding gene: 150009606
Following gene: 150009608
Centisome position: 75.14
GC content: 41.67
Gene sequence:
>780_bases ATGTCTACAATTCTTTTTGATAAAATAGTATTTGGCCCGATACATAGTCGGCGTCTAGGTGTCTCTTTAGGGATGAATTT ACTTCCTACAGACGGGAAATTATGCTCTTTTAATTGCATTTATTGCGAATGTGGATTGAATGAGAATCATAGGACCCATA GTAAACTGCCTACTCGTACGGAAGTGAGGGAAGCCTTAGAGCAAAAACTAAGTTCCATGAAAGCGGAAGGGATCGCTCCG GATGTAATTACATTCGCCGGAAACGGAGAGCCTACGATACACCCGGAATTCGGTGGAATCATTGATGATACGATCGCTAC CCGGGATCGATTTTTCCCTGATGCTAAAATCGCCGTGCTTTCTAATTCTACGATGCTCCAGAAAGAGGAGGTCTTTCAAG CCTTGAATAAAATAGAGGATAACATATTGAAACTGGATTCTGTATTAGACAGTCGGATTCGGCAGATAGACGTACCTAAT TCTCCGGCGTTTAATTTCGAGTCTTTATTAAAGCAATTATGTCGTTTTAACGGAAACTTGATTATACAGACCATGTTCTT GAAGGGGGAAGTGAATGGGAAATCGGTTAATAATATGACAGAAGAGGAGATAGCGGGCTGGATCTCCGCCTTAAAACAAA TCCGTCCGAAACAAGTCATGATTTATACGATAGATAGGGAGACCCCGGTTAAAGCTTTGAAAAAAGCTACTAAAGAAGAA TTAGATGCGATTGCAGAACGGGCCCGGAAGGAGGGTTTTGACGTGACGGTATCTTATTAA
Upstream 100 bases:
>100_bases TGATACGGAGGAGATAAGCGGTTCTGATAAAACAGATCTTTATGCTTTGCTTCGCTGGAAATTTTAGAGTAGATTTGCGT GGGTAAAAACAAACAGCGCT
Downstream 100 bases:
>100_bases ACTAACTAATTTAGAGAAACACAATAAGTAGTATGAGAACATTCAGTAAAAAGAAAAAATTGCCTCGACTCTTGACGCTT TGTGGAGCGGTAGCGGTCTC
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: GTP-binding protein obg [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSTILFDKIVFGPIHSRRLGVSLGMNLLPTDGKLCSFNCIYCECGLNENHRTHSKLPTRTEVREALEQKLSSMKAEGIAP DVITFAGNGEPTIHPEFGGIIDDTIATRDRFFPDAKIAVLSNSTMLQKEEVFQALNKIEDNILKLDSVLDSRIRQIDVPN SPAFNFESLLKQLCRFNGNLIIQTMFLKGEVNGKSVNNMTEEEIAGWISALKQIRPKQVMIYTIDRETPVKALKKATKEE LDAIAERARKEGFDVTVSY
Sequences:
>Translated_259_residues MSTILFDKIVFGPIHSRRLGVSLGMNLLPTDGKLCSFNCIYCECGLNENHRTHSKLPTRTEVREALEQKLSSMKAEGIAP DVITFAGNGEPTIHPEFGGIIDDTIATRDRFFPDAKIAVLSNSTMLQKEEVFQALNKIEDNILKLDSVLDSRIRQIDVPN SPAFNFESLLKQLCRFNGNLIIQTMFLKGEVNGKSVNNMTEEEIAGWISALKQIRPKQVMIYTIDRETPVKALKKATKEE LDAIAERARKEGFDVTVSY >Mature_258_residues STILFDKIVFGPIHSRRLGVSLGMNLLPTDGKLCSFNCIYCECGLNENHRTHSKLPTRTEVREALEQKLSSMKAEGIAPD VITFAGNGEPTIHPEFGGIIDDTIATRDRFFPDAKIAVLSNSTMLQKEEVFQALNKIEDNILKLDSVLDSRIRQIDVPNS PAFNFESLLKQLCRFNGNLIIQTMFLKGEVNGKSVNNMTEEEIAGWISALKQIRPKQVMIYTIDRETPVKALKKATKEEL DAIAERARKEGFDVTVSY
Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t
COG id: COG0731
COG function: function code C; Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR014100 - InterPro: IPR006074 - InterPro: IPR006073 - InterPro: IPR006169 - InterPro: IPR002917 - InterPro: IPR007197 [H]
Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 29050; Mature: 28919
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTILFDKIVFGPIHSRRLGVSLGMNLLPTDGKLCSFNCIYCECGLNENHRTHSKLPTRT CCCHHHHHHHHCCCCCCHHHHHHCCEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHH EVREALEQKLSSMKAEGIAPDVITFAGNGEPTIHPEFGGIIDDTIATRDRFFPDAKIAVL HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEE SNSTMLQKEEVFQALNKIEDNILKLDSVLDSRIRQIDVPNSPAFNFESLLKQLCRFNGNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCE IIQTMFLKGEVNGKSVNNMTEEEIAGWISALKQIRPKQVMIYTIDRETPVKALKKATKEE EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH LDAIAERARKEGFDVTVSY HHHHHHHHHHCCCCEEEEC >Mature Secondary Structure STILFDKIVFGPIHSRRLGVSLGMNLLPTDGKLCSFNCIYCECGLNENHRTHSKLPTRT CCHHHHHHHHCCCCCCHHHHHHCCEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHH EVREALEQKLSSMKAEGIAPDVITFAGNGEPTIHPEFGGIIDDTIATRDRFFPDAKIAVL HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHHHHCCCCCEEEEE SNSTMLQKEEVFQALNKIEDNILKLDSVLDSRIRQIDVPNSPAFNFESLLKQLCRFNGNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCE IIQTMFLKGEVNGKSVNNMTEEEIAGWISALKQIRPKQVMIYTIDRETPVKALKKATKEE EEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH LDAIAERARKEGFDVTVSY HHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA