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The map label for this gene is yggV [C]

Identifier: 150009597

GI number: 150009597

Start: 3601607

End: 3602188

Strand: Direct

Name: yggV [C]

Synonym: BDI_3010

Alternate gene names: 150009597

Gene position: 3601607-3602188 (Clockwise)

Preceding gene: 150009596

Following gene: 150009598

Centisome position: 74.86

GC content: 43.47

Gene sequence:

>582_bases
ATGAAACTTGTATTCGCGACAAATAATCAACACAAACTGGACGAGGTCCGCAAGATAACCGCCGGATACGCGGAAATCAT
AAGTTTATCCGATATCGATTGCCATGACGATATCCCCGAGACGGCAGATACCTTAGAGGGAAATGCTTTGCTAAAAGCCC
GCTATATCAAGGAGAAATTCGGATATGATTGTTTCGCTGACGACACGGGATTAGAAGTCGAGGTATTGAATAATGCTCCG
GGAGTCTATTCGGCTCGTTACGCAGGAACAGAGCACGACTCGGAAGCTAATATGAACAAGCTGTTGTCCGAAATGAATCA
TAAAGAAAACAGAAAAGCACGTTTCCGCACGGTCATAGCTCTAGTCCTTGACGGAAAAGAATATACCTTCGACGGTATCG
TGAATGGCTCTATCACTACCGAAAAACGCGGAGATAGCGGATTTGGATACGATCCTATATTCATGCCTGATACCTATACA
CAAACTTTCGCCGAGATGGGTAACGATACAAAAAACCAGATCAGCCATCGTGCGAAAGCCGTCATGAAGTTAACATCATT
TTTATCTGATTACAATTGTTAA

Upstream 100 bases:

>100_bases
GATAAAGACTTAAAAAAGAATATACAAACAATTTAAAGCATTTCCATACGTTATATATCTACCGTATAGAAATGCTTTCT
TATTTAATAGATTACGAAAT

Downstream 100 bases:

>100_bases
TATGAGACATATACTTACTATCATTCTATTTTCATTTTTTTCATTCACTGTATTAGCCGCTAATTTTAATACAACCGGAT
GGAAAACGTATCTTTCTTAC

Product: putative deoxyribonucleoside-triphosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKLVFATNNQHKLDEVRKITAGYAEIISLSDIDCHDDIPETADTLEGNALLKARYIKEKFGYDCFADDTGLEVEVLNNAP
GVYSARYAGTEHDSEANMNKLLSEMNHKENRKARFRTVIALVLDGKEYTFDGIVNGSITTEKRGDSGFGYDPIFMPDTYT
QTFAEMGNDTKNQISHRAKAVMKLTSFLSDYNC

Sequences:

>Translated_193_residues
MKLVFATNNQHKLDEVRKITAGYAEIISLSDIDCHDDIPETADTLEGNALLKARYIKEKFGYDCFADDTGLEVEVLNNAP
GVYSARYAGTEHDSEANMNKLLSEMNHKENRKARFRTVIALVLDGKEYTFDGIVNGSITTEKRGDSGFGYDPIFMPDTYT
QTFAEMGNDTKNQISHRAKAVMKLTSFLSDYNC
>Mature_193_residues
MKLVFATNNQHKLDEVRKITAGYAEIISLSDIDCHDDIPETADTLEGNALLKARYIKEKFGYDCFADDTGLEVEVLNNAP
GVYSARYAGTEHDSEANMNKLLSEMNHKENRKARFRTVIALVLDGKEYTFDGIVNGSITTEKRGDSGFGYDPIFMPDTYT
QTFAEMGNDTKNQISHRAKAVMKLTSFLSDYNC

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family

Homologues:

Organism=Escherichia coli, GI1789324, Length=193, Percent_Identity=37.3056994818653, Blast_Score=116, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17556833, Length=191, Percent_Identity=29.8429319371728, Blast_Score=76, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6322529, Length=196, Percent_Identity=33.1632653061224, Blast_Score=79, Evalue=7e-16,
Organism=Drosophila melanogaster, GI19920712, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NTPA_PARD8 (A6LGA4)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001304340.1
- ProteinModelPortal:   A6LGA4
- SMR:   A6LGA4
- STRING:   A6LGA4
- GeneID:   5308159
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_3010
- eggNOG:   COG0127
- HOGENOM:   HBG697237
- OMA:   VYTADWA
- ProtClustDB:   PRK14823
- BioCyc:   PDIS435591:BDI_3010-MONOMER
- HAMAP:   MF_01405
- InterPro:   IPR002637
- InterPro:   IPR020922
- PANTHER:   PTHR11067
- TIGRFAMs:   TIGR00042

Pfam domain/function: PF01725 Ham1p_like

EC number: =3.6.1.15

Molecular weight: Translated: 21645; Mature: 21645

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVFATNNQHKLDEVRKITAGYAEIISLSDIDCHDDIPETADTLEGNALLKARYIKEKF
CEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
GYDCFADDTGLEVEVLNNAPGVYSARYAGTEHDSEANMNKLLSEMNHKENRKARFRTVIA
CCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LVLDGKEYTFDGIVNGSITTEKRGDSGFGYDPIFMPDTYTQTFAEMGNDTKNQISHRAKA
EEECCCEEEECCEECCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
VMKLTSFLSDYNC
HHHHHHHHHHCCC
>Mature Secondary Structure
MKLVFATNNQHKLDEVRKITAGYAEIISLSDIDCHDDIPETADTLEGNALLKARYIKEKF
CEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
GYDCFADDTGLEVEVLNNAPGVYSARYAGTEHDSEANMNKLLSEMNHKENRKARFRTVIA
CCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LVLDGKEYTFDGIVNGSITTEKRGDSGFGYDPIFMPDTYTQTFAEMGNDTKNQISHRAKA
EEECCCEEEECCEECCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
VMKLTSFLSDYNC
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA