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The map label for this gene is yijO [C]

Identifier: 150009576

GI number: 150009576

Start: 3578798

End: 3579943

Strand: Reverse

Name: yijO [C]

Synonym: BDI_2989

Alternate gene names: 150009576

Gene position: 3579943-3578798 (Counterclockwise)

Preceding gene: 150009585

Following gene: 150009573

Centisome position: 74.41

GC content: 40.58

Gene sequence:

>1146_bases
ATGTTGGATAAAATTCAGTTTCTACTAAGCTTACAGATATTAGGCTTTTGTGTTTTTGGTGGTATTACCCTGCTACTACG
GGCCCGTGAGAATAGGGCAAAACAGATTTTGGGGTGGAGTATGTTATTATGGGCGTTTTTAGCGGCGGTACGAGTATCGG
TTAACCTGTATTTAGAGGATTCAAAAGAGATATTTCATCCGGATGTGCTGATTATGGGATGTATTGTGGTAGCTACATTA
GCTTGTTACGTGATAGAAGTGTTACGACCTTGCTATATGACCGTTCGCCGTTTCTTTATTTTTACCAGTCCGATATGGGT
ATTGGGTATTTCTTTTTTGATTTACCGGCTATCCGGTGGAAATATTCATCGTTATAACTCTTTTGGCGAGGTATTCGATA
CCTTGAATCTGGATGTGGTTATAAGGCTTTTGATTTTATTTTTCACGCTTCTGTATATGATCGTTCCTATTTATCTGATC
TTGCGCTATAGTGAGGGATTTAAGGTGTATTTAAGGGAAAATGTATCGGACCCGGAAGATTATGATCTGGACTGGTTGAA
AAAGACCATGCTGATCCTTTCTTCTATGTATATTTTTTATTTGGTATTGTTGTTTACGGATCGGGTTAGCCTATATGTAA
TCGACAAAACGTTTTTATTGGTTTTATGGTACTATTTCTTTTATAAGGCCTTGTTCCTAAAGGTTATCCATTTGGATCAC
ACATTCGAGAGCGGATGGGGATTACCCGATTTGGAGGAGGATACGGATGATGATCAAGGTAGTGAGGAACAGAAAGGCAT
CATACGCCAAAGGTATGTTGAGGAAGTACAGGCGTGGTTTGAACGTGAAAAGCCCTATCTACGGGAAGATTTACGCTTAA
CGGATTTACAGCGGATCTTCCCGATGAGCCGCTCTTATCTATCCCAATTGTTTAATAAAGAATTAGGTTGTTCCTTCTCG
GATTACGTAAACCATTTCAGGGTAGAGGAAAGCAAACGTTTATTGGAAGCCGAACCTCTGGCCAGTATACAAGAGATAGC
CGAACGTTCGGGCTTCCATTCTATCAGTACGTTCCGTCGTGCGTTTATTAAGCAGACAGGGGTTATTCCTTCCGAATACA
GGAGAGACGGGAACGAGTCAATTTAA

Upstream 100 bases:

>100_bases
AGATCGTTCAAATTGTCTAAGGCGTTCATATTGTTAACTGAGGAGTCAAAAAGAACATTCGGGGGGGCGTATTGTTTAAT
AGATAGGAGGTAGTGTTATT

Downstream 100 bases:

>100_bases
CCGGTAACTGACGAAAGCGAATCGCTTGCTATCGGGTGCCCAAGAGTTTACGTTTATCGTACCTTGCCCGCCGAATAGTT
TGACTAAAGTCTTAGGTTCT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator Arac Family; Response Regulator Receiver Protein; AraC Family Two Component Transcriptional Regulator; Helix-Turn-Helix- Domain Containing Protein AraC Type; Two Component Transcriptional Regulator Arac Family; Two-Component Response Regulator; Helix-Turn-Helix Domain-Containing Protein; Regulatory Helix-Turn-Helix Protein AraC Family; Two Component Transcriptional Regulator AraC Family

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MLDKIQFLLSLQILGFCVFGGITLLLRARENRAKQILGWSMLLWAFLAAVRVSVNLYLEDSKEIFHPDVLIMGCIVVATL
ACYVIEVLRPCYMTVRRFFIFTSPIWVLGISFLIYRLSGGNIHRYNSFGEVFDTLNLDVVIRLLILFFTLLYMIVPIYLI
LRYSEGFKVYLRENVSDPEDYDLDWLKKTMLILSSMYIFYLVLLFTDRVSLYVIDKTFLLVLWYYFFYKALFLKVIHLDH
TFESGWGLPDLEEDTDDDQGSEEQKGIIRQRYVEEVQAWFEREKPYLREDLRLTDLQRIFPMSRSYLSQLFNKELGCSFS
DYVNHFRVEESKRLLEAEPLASIQEIAERSGFHSISTFRRAFIKQTGVIPSEYRRDGNESI

Sequences:

>Translated_381_residues
MLDKIQFLLSLQILGFCVFGGITLLLRARENRAKQILGWSMLLWAFLAAVRVSVNLYLEDSKEIFHPDVLIMGCIVVATL
ACYVIEVLRPCYMTVRRFFIFTSPIWVLGISFLIYRLSGGNIHRYNSFGEVFDTLNLDVVIRLLILFFTLLYMIVPIYLI
LRYSEGFKVYLRENVSDPEDYDLDWLKKTMLILSSMYIFYLVLLFTDRVSLYVIDKTFLLVLWYYFFYKALFLKVIHLDH
TFESGWGLPDLEEDTDDDQGSEEQKGIIRQRYVEEVQAWFEREKPYLREDLRLTDLQRIFPMSRSYLSQLFNKELGCSFS
DYVNHFRVEESKRLLEAEPLASIQEIAERSGFHSISTFRRAFIKQTGVIPSEYRRDGNESI
>Mature_381_residues
MLDKIQFLLSLQILGFCVFGGITLLLRARENRAKQILGWSMLLWAFLAAVRVSVNLYLEDSKEIFHPDVLIMGCIVVATL
ACYVIEVLRPCYMTVRRFFIFTSPIWVLGISFLIYRLSGGNIHRYNSFGEVFDTLNLDVVIRLLILFFTLLYMIVPIYLI
LRYSEGFKVYLRENVSDPEDYDLDWLKKTMLILSSMYIFYLVLLFTDRVSLYVIDKTFLLVLWYYFFYKALFLKVIHLDH
TFESGWGLPDLEEDTDDDQGSEEQKGIIRQRYVEEVQAWFEREKPYLREDLRLTDLQRIFPMSRSYLSQLFNKELGCSFS
DYVNHFRVEESKRLLEAEPLASIQEIAERSGFHSISTFRRAFIKQTGVIPSEYRRDGNESI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44966; Mature: 44966

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKIQFLLSLQILGFCVFGGITLLLRARENRAKQILGWSMLLWAFLAAVRVSVNLYLED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
SKEIFHPDVLIMGCIVVATLACYVIEVLRPCYMTVRRFFIFTSPIWVLGISFLIYRLSGG
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
NIHRYNSFGEVFDTLNLDVVIRLLILFFTLLYMIVPIYLILRYSEGFKVYLRENVSDPED
CEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
YDLDWLKKTMLILSSMYIFYLVLLFTDRVSLYVIDKTFLLVLWYYFFYKALFLKVIHLDH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
TFESGWGLPDLEEDTDDDQGSEEQKGIIRQRYVEEVQAWFEREKPYLREDLRLTDLQRIF
CHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHH
PMSRSYLSQLFNKELGCSFSDYVNHFRVEESKRLLEAEPLASIQEIAERSGFHSISTFRR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH
AFIKQTGVIPSEYRRDGNESI
HHHHHHCCCCHHHHCCCCCCC
>Mature Secondary Structure
MLDKIQFLLSLQILGFCVFGGITLLLRARENRAKQILGWSMLLWAFLAAVRVSVNLYLED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
SKEIFHPDVLIMGCIVVATLACYVIEVLRPCYMTVRRFFIFTSPIWVLGISFLIYRLSGG
CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
NIHRYNSFGEVFDTLNLDVVIRLLILFFTLLYMIVPIYLILRYSEGFKVYLRENVSDPED
CEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
YDLDWLKKTMLILSSMYIFYLVLLFTDRVSLYVIDKTFLLVLWYYFFYKALFLKVIHLDH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
TFESGWGLPDLEEDTDDDQGSEEQKGIIRQRYVEEVQAWFEREKPYLREDLRLTDLQRIF
CHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHH
PMSRSYLSQLFNKELGCSFSDYVNHFRVEESKRLLEAEPLASIQEIAERSGFHSISTFRR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHH
AFIKQTGVIPSEYRRDGNESI
HHHHHHCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA