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The map label for this gene is deoC [H]

Identifier: 150009557

GI number: 150009557

Start: 3553982

End: 3554920

Strand: Direct

Name: deoC [H]

Synonym: BDI_2970

Alternate gene names: 150009557

Gene position: 3553982-3554920 (Clockwise)

Preceding gene: 150009556

Following gene: 150009559

Centisome position: 73.87

GC content: 47.82

Gene sequence:

>939_bases
ATGGCACATCATCACGATTGCGAATGTGGACATGATCATCATCATGAACATGAACACGAATCAAATTCCGTACAGATAGA
CCGTTATCATGAAGCTTTCAATAAGTTTGAGCCGGCCCTGCCGGATACCCAGACCACCGAGACTGTAAACGCTCTTTTAG
AGAAACATTTCCAAGAAAACTTTACACCGGAAGTATTGAAAACGATTCATGGCTGCATCGACTTGACCTCATTGACCAGT
CTGGATACCAAAGAAAACATCTGGAAGATGGTCGACACGGTAAATGATTTCGAGGGAACTCGTCCGGATGTCCCGAACGT
AGCCGCTATTTGCGTCTATCCCCTATTCGTGGAAACGGTTAAGCAGGCACTTACTGCGCAAGAGGTTAAGATTGCGTCGG
TTGCCGGAGGTTTTCCTTCCTCACAGACATTTACGGAAGTCAAGATCGCCGAAACGGCCATGGCAGTCATGCAAGGAGCC
GATGAAATCGACGTTGTCATGAACCTAGGCTATTTCATGGAAGACAATTTCGAGGAATTGACCGAGGAATTGCAAGAGAT
CAAGGAGAGCTGTCGCCACGCCCATTTAAAGGTAATCTTAGAGACCGGAGCTTTAGTCACAACGGAGAACATCCAAAAAG
CATCCATCCTAGCCATGTATTCCGGCGCGGACTTCATCAAGACCTCTACCGGCAAAGGATACCCGGGAGCCACTTTCGAG
GCCGCCTATACCATGTGCAAGGCCATCAAAACCTACCATTCCATCACCGGAAACAAGGTTGGCATCAAGATCTCCGGAGG
CGTACGCACGGCGGAAGACGCAGTTCGATATTATACGATCGTAAAGGAGATACTAGGCGATGAATGGCTTAACAAAGATT
TGTTCCGTATAGGAGCGAGCAGTCTGGTCGGTGATATAGAAAAACGACTCGGGAAATAG

Upstream 100 bases:

>100_bases
CAGACCGGAGTAGATCTTACCGCCGCTTTCGAGAAGAATCTCCAAAAGAAAACAGACCGAGATAAAGAACGACATATAAA
CAATCAAAAACTATAAGCAT

Downstream 100 bases:

>100_bases
TCCATTCTAATAAACCGGGCGCAGATGGCTTAGAATCCTGTGTCCGGTAAGCACTCTCAAAGTCAGTTAACTTACCTTGG
CATCGAAGTTAACTGACTTC

Product: deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAHHHDCECGHDHHHEHEHESNSVQIDRYHEAFNKFEPALPDTQTTETVNALLEKHFQENFTPEVLKTIHGCIDLTSLTS
LDTKENIWKMVDTVNDFEGTRPDVPNVAAICVYPLFVETVKQALTAQEVKIASVAGGFPSSQTFTEVKIAETAMAVMQGA
DEIDVVMNLGYFMEDNFEELTEELQEIKESCRHAHLKVILETGALVTTENIQKASILAMYSGADFIKTSTGKGYPGATFE
AAYTMCKAIKTYHSITGNKVGIKISGGVRTAEDAVRYYTIVKEILGDEWLNKDLFRIGASSLVGDIEKRLGK

Sequences:

>Translated_312_residues
MAHHHDCECGHDHHHEHEHESNSVQIDRYHEAFNKFEPALPDTQTTETVNALLEKHFQENFTPEVLKTIHGCIDLTSLTS
LDTKENIWKMVDTVNDFEGTRPDVPNVAAICVYPLFVETVKQALTAQEVKIASVAGGFPSSQTFTEVKIAETAMAVMQGA
DEIDVVMNLGYFMEDNFEELTEELQEIKESCRHAHLKVILETGALVTTENIQKASILAMYSGADFIKTSTGKGYPGATFE
AAYTMCKAIKTYHSITGNKVGIKISGGVRTAEDAVRYYTIVKEILGDEWLNKDLFRIGASSLVGDIEKRLGK
>Mature_311_residues
AHHHDCECGHDHHHEHEHESNSVQIDRYHEAFNKFEPALPDTQTTETVNALLEKHFQENFTPEVLKTIHGCIDLTSLTSL
DTKENIWKMVDTVNDFEGTRPDVPNVAAICVYPLFVETVKQALTAQEVKIASVAGGFPSSQTFTEVKIAETAMAVMQGAD
EIDVVMNLGYFMEDNFEELTEELQEIKESCRHAHLKVILETGALVTTENIQKASILAMYSGADFIKTSTGKGYPGATFEA
AYTMCKAIKTYHSITGNKVGIKISGGVRTAEDAVRYYTIVKEILGDEWLNKDLFRIGASSLVGDIEKRLGK

Specific function: Nucleotide and deoxyribonucleotide catabolism. [C]

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 2 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116063554, Length=250, Percent_Identity=43.6, Blast_Score=201, Evalue=9e-52,
Organism=Escherichia coli, GI1790841, Length=232, Percent_Identity=37.5, Blast_Score=127, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17533015, Length=249, Percent_Identity=43.3734939759036, Blast_Score=199, Evalue=1e-51,
Organism=Drosophila melanogaster, GI19922098, Length=250, Percent_Identity=38, Blast_Score=160, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 34700; Mature: 34569

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHHHDCECGHDHHHEHEHESNSVQIDRYHEAFNKFEPALPDTQTTETVNALLEKHFQEN
CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
FTPEVLKTIHGCIDLTSLTSLDTKENIWKMVDTVNDFEGTRPDVPNVAAICVYPLFVETV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
KQALTAQEVKIASVAGGFPSSQTFTEVKIAETAMAVMQGADEIDVVMNLGYFMEDNFEEL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCHHHH
TEELQEIKESCRHAHLKVILETGALVTTENIQKASILAMYSGADFIKTSTGKGYPGATFE
HHHHHHHHHHHHHHHHHHHEECCCEEEECCCCHHHEEEEECCCCCEECCCCCCCCCCHHH
AAYTMCKAIKTYHSITGNKVGIKISGGVRTAEDAVRYYTIVKEILGDEWLNKDLFRIGAS
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SLVGDIEKRLGK
HHHHHHHHHHCC
>Mature Secondary Structure 
AHHHDCECGHDHHHEHEHESNSVQIDRYHEAFNKFEPALPDTQTTETVNALLEKHFQEN
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
FTPEVLKTIHGCIDLTSLTSLDTKENIWKMVDTVNDFEGTRPDVPNVAAICVYPLFVETV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
KQALTAQEVKIASVAGGFPSSQTFTEVKIAETAMAVMQGADEIDVVMNLGYFMEDNFEEL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCHHHH
TEELQEIKESCRHAHLKVILETGALVTTENIQKASILAMYSGADFIKTSTGKGYPGATFE
HHHHHHHHHHHHHHHHHHHEECCCEEEECCCCHHHEEEEECCCCCEECCCCCCCCCCHHH
AAYTMCKAIKTYHSITGNKVGIKISGGVRTAEDAVRYYTIVKEILGDEWLNKDLFRIGAS
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SLVGDIEKRLGK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA