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The map label for this gene is 150009543

Identifier: 150009543

GI number: 150009543

Start: 3539852

End: 3540454

Strand: Reverse

Name: 150009543

Synonym: BDI_2956

Alternate gene names: NA

Gene position: 3540454-3539852 (Counterclockwise)

Preceding gene: 150009544

Following gene: 150009542

Centisome position: 73.59

GC content: 50.58

Gene sequence:

>603_bases
ATGGAAGAAAAGAAGATAAATAACATCTCGTCTGTTTGCGTGTATTGCGCGTCCAGCACGAAGATTCCCCCGATTTATTT
TGACGCCGCCAAGGAATTGGGGTGTCTTTTGGGAGAGCGAAAACTACGGGTAGTCAATGGTGCCGGGAATATCGGTTTGA
TGTGCACTGTCTCCGACGCTGCGTTAGCGGCTGGTGGAACGGTAACGGGCGTTATCCCCCATTTTATGGTGGAGCAGGAT
TGGTATCATAAAGGCTTGACCGAGTTGATTGAGGTCGAGACGATGCACGAACGTAAACAGCTCATGGCAAACCTCTCGGA
TGCGGTGATCGCCCTTCCCGGTGGATGCGGTACATTAGAGGAACTTCTGGAGATCATCACTTGGAAACAACTCGGTCTCT
ACCTCAATCCGATCGTAATCCTCAATATTAATCATTACTATGATCCCTTGTTGGAACTTTTGAGGAACGCCATGAACGAG
AATTTCATGCGTCCCCAGCACGCCAAGATGTGGGCGGTAGCCGACACGCCGGAAGAAGCTATCCGTCTCATCTACGCCGA
GCCGAAATGGGACGCAAGCCTTCGGAAGATCGCGGCGATTTAA

Upstream 100 bases:

>100_bases
CCGTGAGATAACGGACGCATTGGCGAAAGTCTTCCCCGATGATCCTTGTCTGGGGGATTTCGCCTTATTTGGCTACGATA
TAAATCAAGAATAAAAAGAT

Downstream 100 bases:

>100_bases
ATCTTAAAAATGAATATGATAATGAAAAAACTAGGTTTATTAATGATGTTGTTGCTCCTGTCAAGGATCGCTTTGTTCTG
CCAGGCACAGACGGCGGGTA

Product: putative lysine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEEKKINNISSVCVYCASSTKIPPIYFDAAKELGCLLGERKLRVVNGAGNIGLMCTVSDAALAAGGTVTGVIPHFMVEQD
WYHKGLTELIEVETMHERKQLMANLSDAVIALPGGCGTLEELLEIITWKQLGLYLNPIVILNINHYYDPLLELLRNAMNE
NFMRPQHAKMWAVADTPEEAIRLIYAEPKWDASLRKIAAI

Sequences:

>Translated_200_residues
MEEKKINNISSVCVYCASSTKIPPIYFDAAKELGCLLGERKLRVVNGAGNIGLMCTVSDAALAAGGTVTGVIPHFMVEQD
WYHKGLTELIEVETMHERKQLMANLSDAVIALPGGCGTLEELLEIITWKQLGLYLNPIVILNINHYYDPLLELLRNAMNE
NFMRPQHAKMWAVADTPEEAIRLIYAEPKWDASLRKIAAI
>Mature_200_residues
MEEKKINNISSVCVYCASSTKIPPIYFDAAKELGCLLGERKLRVVNGAGNIGLMCTVSDAALAAGGTVTGVIPHFMVEQD
WYHKGLTELIEVETMHERKQLMANLSDAVIALPGGCGTLEELLEIITWKQLGLYLNPIVILNINHYYDPLLELLRNAMNE
NFMRPQHAKMWAVADTPEEAIRLIYAEPKWDASLRKIAAI

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=200, Percent_Identity=38, Blast_Score=144, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 22255; Mature: 22255

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKKINNISSVCVYCASSTKIPPIYFDAAKELGCLLGERKLRVVNGAGNIGLMCTVSDA
CCCCHHCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCH
ALAAGGTVTGVIPHFMVEQDWYHKGLTELIEVETMHERKQLMANLSDAVIALPGGCGTLE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHH
ELLEIITWKQLGLYLNPIVILNINHYYDPLLELLRNAMNENFMRPQHAKMWAVADTPEEA
HHHHHHHHHHHCCEECCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHH
IRLIYAEPKWDASLRKIAAI
EEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MEEKKINNISSVCVYCASSTKIPPIYFDAAKELGCLLGERKLRVVNGAGNIGLMCTVSDA
CCCCHHCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCH
ALAAGGTVTGVIPHFMVEQDWYHKGLTELIEVETMHERKQLMANLSDAVIALPGGCGTLE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHH
ELLEIITWKQLGLYLNPIVILNINHYYDPLLELLRNAMNENFMRPQHAKMWAVADTPEEA
HHHHHHHHHHHCCEECCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHH
IRLIYAEPKWDASLRKIAAI
EEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]