Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009532

Identifier: 150009532

GI number: 150009532

Start: 3523976

End: 3525547

Strand: Direct

Name: 150009532

Synonym: BDI_2945

Alternate gene names: NA

Gene position: 3523976-3525547 (Clockwise)

Preceding gene: 150009531

Following gene: 150009533

Centisome position: 73.24

GC content: 45.23

Gene sequence:

>1572_bases
ATGAAAAAGATAATTATAGCCATGATGGCAGCAGTCTCATTACTGAATTTCAGCGGATGCGACTCCTTGGACATGGAACC
CGTAAGTAGTATTTCCGACGCAAACTATTGGAAATCCCCGGACCTGTTTAAGGCATTCAACATAGGTTTACACGGATTGC
TCCGTTCACAATCCAGTTATAACATATTCGTATTGGGCGAACCTCGCTCGGACATCTACGGAGATCAGCCGTTCGGAGGC
GAGGCTACCCAAGGCGTAGAGCGTTTCTCATACAATACGATCAACGCAGAGTTTACAGGAATCAGCAACTTCGCTAATTT
TTATACGACACTGAACCAAATCAACTTGATGATCCGTAGAACGAACGAGACCGATTTATTAGGCGAGGCCGAAAAGAACT
ATTACTTAGGGCAGGCTTACGGTTTACGCGCCTATATCTATTTCCATTTGTTACGCTCTTGGGGAGACGTTATCATTACT
ACGGAGCCAACCTTAGGTAGCGAATTGGACATCTCTCACCTTGATAAGGCCGCTTCTCCAGCGAGTGAGGTGATGGATCT
GATCAAGAAGGATATCGATGCCTCGGAAAAAGCTTTTGGCGGAGATTATTCTTATAAACAAGGAAAGTGTTATTGGTCTA
AACCCGCTACCTTGATGCTGAAAGGTGAGGTTTATCTATGGAGCGGACGCCAGATGGGTGGCGGCACGGGCGATTATACC
GTAGCCAAGACAGCCTTGCAAGATCTTCAACAAAACGGCAACTTAAAGCTGCAAGAGAAATTCACGGACGTTTTCTCTTT
CAACAATAAGGAGAACAGCGAGATGATCTTCGCACTCCATAGTGGTAAGGAGGATGATTTCATGATGTGGAGAGACTATA
ACTGGCGTAACAATATGGTACCTCAACGTGAGTACATGGCAGGCTACTGTGACGAGACAGGAACTCCATTCCTTGAAATA
CCGGGATACAACCTACAAGGCTTAATGCGCTACCAAGTAAAGAAAGATCATTACCTAAAATCATTCCGCGAAGGTGATAC
CCGCTTGAAAGGTACCTTGAAGGCCGTTTATAAAAAGCACGAAGACGGCACCTTGGAGTATATCGCACCAATCCAATACA
AGTTCCAAGGAACCACCTTGGAAGGTAGTAACGAGAGAAGTTGGTACGATGATTATCCTATCTATCGCTATGCGGATGCC
TTGCTATTATTAGCCGAGGCTAAGGCCTTGCTCGGAGAAGATCCTTCTACAGAGATCAACGCCGTTCGCGAGCGTGCTTA
CGGTTCCGAATATTTTAACGCACATAAGAACGAGGTGGCTTATCCGAATGACAAAGGAAGTTTCTATAACGATAACCCGT
TTGAGGCGGGCGACGAGAATGTGATGGAAGCTATCCTTAAAGAGAGACTTCGCGAGTTCTTCTTTGAGGGTAAACGTTGG
TACGACTTGAGACGCTTCGGTAAGGATTATGTATTAAAATATACCACAGCACAAGAATCACGTTTATTATGGCCGATCAA
TGAAGGGGCATTGACAAACAATCCCGCATTGAAACAGACTCCCGGATACTAA

Upstream 100 bases:

>100_bases
GGTCAAGGTCTTGATAACGGTAGATACCCAACTCCTAAAACGGTTCTTCTTGGTTTATCCGTAACATTTTAGTCAAACCC
ATTAAAAAAGACAGACATTT

Downstream 100 bases:

>100_bases
TCGTACATAGGTTTAAGGCGATTGGATATAACTAGGTTTTTGGCACGAATTCCAAAGGGGCTTTGTTCATATGAATGAAT
ATCGCTACCTTTGGAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; Lipoprotein

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSYNIFVLGEPRSDIYGDQPFGG
EATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRRTNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIIT
TEPTLGSELDISHLDKAASPASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT
VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMVPQREYMAGYCDETGTPFLEI
PGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKHEDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADA
LLLLAEAKALLGEDPSTEINAVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW
YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY

Sequences:

>Translated_523_residues
MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSYNIFVLGEPRSDIYGDQPFGG
EATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRRTNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIIT
TEPTLGSELDISHLDKAASPASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT
VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMVPQREYMAGYCDETGTPFLEI
PGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKHEDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADA
LLLLAEAKALLGEDPSTEINAVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW
YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY
>Mature_523_residues
MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSYNIFVLGEPRSDIYGDQPFGG
EATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRRTNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIIT
TEPTLGSELDISHLDKAASPASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT
VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMVPQREYMAGYCDETGTPFLEI
PGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKHEDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADA
LLLLAEAKALLGEDPSTEINAVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW
YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59894; Mature: 59894

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSY
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
NIFVLGEPRSDIYGDQPFGGEATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRR
EEEEEECCCHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHEEEEEEE
TNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIITTEPTLGSELDISHLDKAASP
CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC
ASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCCEEEEECEEEEEECCCCCCCCCCHH
VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMV
HHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
PQREYMAGYCDETGTPFLEIPGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKH
CCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
EDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADALLLLAEAKALLGEDPSTEIN
CCCCEEEEECEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
AVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY
HHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIIIAMMAAVSLLNFSGCDSLDMEPVSSISDANYWKSPDLFKAFNIGLHGLLRSQSSY
CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
NIFVLGEPRSDIYGDQPFGGEATQGVERFSYNTINAEFTGISNFANFYTTLNQINLMIRR
EEEEEECCCHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHEEEEEEE
TNETDLLGEAEKNYYLGQAYGLRAYIYFHLLRSWGDVIITTEPTLGSELDISHLDKAASP
CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC
ASEVMDLIKKDIDASEKAFGGDYSYKQGKCYWSKPATLMLKGEVYLWSGRQMGGGTGDYT
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEECCCCEEEEECEEEEEECCCCCCCCCCHH
VAKTALQDLQQNGNLKLQEKFTDVFSFNNKENSEMIFALHSGKEDDFMMWRDYNWRNNMV
HHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCC
PQREYMAGYCDETGTPFLEIPGYNLQGLMRYQVKKDHYLKSFREGDTRLKGTLKAVYKKH
CCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
EDGTLEYIAPIQYKFQGTTLEGSNERSWYDDYPIYRYADALLLLAEAKALLGEDPSTEIN
CCCCEEEEECEEEEEECCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
AVRERAYGSEYFNAHKNEVAYPNDKGSFYNDNPFEAGDENVMEAILKERLREFFFEGKRW
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
YDLRRFGKDYVLKYTTAQESRLLWPINEGALTNNPALKQTPGY
HHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA