| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009515
Identifier: 150009515
GI number: 150009515
Start: 3502149
End: 3503396
Strand: Direct
Name: 150009515
Synonym: BDI_2928
Alternate gene names: NA
Gene position: 3502149-3503396 (Clockwise)
Preceding gene: 150009514
Following gene: 150009516
Centisome position: 72.79
GC content: 36.22
Gene sequence:
>1248_bases ATGATTAATCTATATATTTTCTCGAACAAAAGTCGAGGTGGCTTATACGGAGTAGGTACCTATATTCGTGAATTGATTAC CGCCTTGCGAAGTAAAAGTAATAGTATCCACATCCATGTAGTTCACATATTATGTGACCAACTTCAAATCGAAAAAAAAG AAGTGAAAGATGTTTCATACTGGTATTTCCCAGAGCCGATCTCAAAAGAATGGAATCTTCTAGATCAAGAACAACGAAAA GTTTACTCTCGGAATATTGTCTATCTACTCAGAAATTATATTCAAGACCAAAAAAATCTAGTTTTTCATTTAAATTCATA CAGAGATAAATCACTTGCATTAGAACTAAAAATTGCATTTGATTGCAAAGTGATTACTGTCACTCATTTTTCTGAATGGA GTTCAGTTATTCATGATAACTTAGAAAAACTTCGAATTATCTTACGAAAAAAAGAAACAAATGAATTGGAAGATTTAATC CAAAAATCATTCGAGGAGGAAAGGACATGTTATGAAAGAATGGATCAAGTGATCAGCCTGTCAAACTATATGCAAGAATT ATTGTATCACGATTATGGAGTAGATATAAATCGTATAATAATTATTCCAAACGGAATGAGCGACAAGATAAAAGAAGAAG TTGACCAGAAGAGATTACGAAAAAAATGGCACTTGTACCCAGAAGAACAAATGATTATTTTTGTCGGACGGTTAGAAGAG ATCAAGGGAACTCATTTCTTGATTCGAGCCTTTCAATTAATTTTACAAGAAAGCCCCAATTGCCGTTTATGGATAGTTGG TGATGGCGATTATCAAAATTCTTTCTCCGAAGCCAATCCTATCTTCTCCAAAATAACTTTCACTGGTTTCGTTGATCAAA CCTCGCTTTTTGAGTTATACCGTTTAGCTGATGTCGGTGTCGTACCTTCCCTATTCGAGCCTTTTGGTTATGTACCTGTC GAAATGATGATGCATGAATTACCCATCGTCGCAACCGCCACATCCGGGTTGAACGAGGTCGTAGACGAATCTTGCGGATT GAAAGTACCATTAATAGTATCTCCTGATAGTGTAGAGATCGACACCTCCCTGTTAGCGCAGAAGATCGTCTACCTATTAC AGAACCCGAAAGAAGCGAAACGACTCGGGAAGAACGGTCGCAAACGGTATTTGGAGAAATATTCCTCGGAAGTATTCGGG AAAAACATGATCGCATTTTATAAATCCTTATTCCAAGAATGTAAATAA
Upstream 100 bases:
>100_bases AGGGCATGTATAGATTGACTGCCCTTGGAGCAATTGAGACTTCGTGGCAACAGCTTTTATAATATAAGTTGTAAGTATAT TCTATCAACATACCATAAAA
Downstream 100 bases:
>100_bases TAATCAACGAACCTGATACTATATGGATACGCTCAATCAAATCGACATATCGATCATTATCCCGATATATAACGTGGAGA AATATTTGACGGTTTGTATC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MINLYIFSNKSRGGLYGVGTYIRELITALRSKSNSIHIHVVHILCDQLQIEKKEVKDVSYWYFPEPISKEWNLLDQEQRK VYSRNIVYLLRNYIQDQKNLVFHLNSYRDKSLALELKIAFDCKVITVTHFSEWSSVIHDNLEKLRIILRKKETNELEDLI QKSFEEERTCYERMDQVISLSNYMQELLYHDYGVDINRIIIIPNGMSDKIKEEVDQKRLRKKWHLYPEEQMIIFVGRLEE IKGTHFLIRAFQLILQESPNCRLWIVGDGDYQNSFSEANPIFSKITFTGFVDQTSLFELYRLADVGVVPSLFEPFGYVPV EMMMHELPIVATATSGLNEVVDESCGLKVPLIVSPDSVEIDTSLLAQKIVYLLQNPKEAKRLGKNGRKRYLEKYSSEVFG KNMIAFYKSLFQECK
Sequences:
>Translated_415_residues MINLYIFSNKSRGGLYGVGTYIRELITALRSKSNSIHIHVVHILCDQLQIEKKEVKDVSYWYFPEPISKEWNLLDQEQRK VYSRNIVYLLRNYIQDQKNLVFHLNSYRDKSLALELKIAFDCKVITVTHFSEWSSVIHDNLEKLRIILRKKETNELEDLI QKSFEEERTCYERMDQVISLSNYMQELLYHDYGVDINRIIIIPNGMSDKIKEEVDQKRLRKKWHLYPEEQMIIFVGRLEE IKGTHFLIRAFQLILQESPNCRLWIVGDGDYQNSFSEANPIFSKITFTGFVDQTSLFELYRLADVGVVPSLFEPFGYVPV EMMMHELPIVATATSGLNEVVDESCGLKVPLIVSPDSVEIDTSLLAQKIVYLLQNPKEAKRLGKNGRKRYLEKYSSEVFG KNMIAFYKSLFQECK >Mature_415_residues MINLYIFSNKSRGGLYGVGTYIRELITALRSKSNSIHIHVVHILCDQLQIEKKEVKDVSYWYFPEPISKEWNLLDQEQRK VYSRNIVYLLRNYIQDQKNLVFHLNSYRDKSLALELKIAFDCKVITVTHFSEWSSVIHDNLEKLRIILRKKETNELEDLI QKSFEEERTCYERMDQVISLSNYMQELLYHDYGVDINRIIIIPNGMSDKIKEEVDQKRLRKKWHLYPEEQMIIFVGRLEE IKGTHFLIRAFQLILQESPNCRLWIVGDGDYQNSFSEANPIFSKITFTGFVDQTSLFELYRLADVGVVPSLFEPFGYVPV EMMMHELPIVATATSGLNEVVDESCGLKVPLIVSPDSVEIDTSLLAQKIVYLLQNPKEAKRLGKNGRKRYLEKYSSEVFG KNMIAFYKSLFQECK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 48602; Mature: 48602
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLYIFSNKSRGGLYGVGTYIRELITALRSKSNSIHIHVVHILCDQLQIEKKEVKDVSY CEEEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEE WYFPEPISKEWNLLDQEQRKVYSRNIVYLLRNYIQDQKNLVFHLNSYRDKSLALELKIAF EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEE DCKVITVTHFSEWSSVIHDNLEKLRIILRKKETNELEDLIQKSFEEERTCYERMDQVISL EEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNYMQELLYHDYGVDINRIIIIPNGMSDKIKEEVDQKRLRKKWHLYPEEQMIIFVGRLEE HHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHH IKGTHFLIRAFQLILQESPNCRLWIVGDGDYQNSFSEANPIFSKITFTGFVDQTSLFELY HCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCHHHHEEEEECCCHHHHHHHH RLADVGVVPSLFEPFGYVPVEMMMHELPIVATATSGLNEVVDESCGLKVPLIVSPDSVEI HHHHCCCCHHHHCCCCCCHHHHHHHHCCEEEECCCCHHHHHHHCCCCEEEEEECCCCCCH DTSLLAQKIVYLLQNPKEAKRLGKNGRKRYLEKYSSEVFGKNMIAFYKSLFQECK HHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MINLYIFSNKSRGGLYGVGTYIRELITALRSKSNSIHIHVVHILCDQLQIEKKEVKDVSY CEEEEEEECCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEE WYFPEPISKEWNLLDQEQRKVYSRNIVYLLRNYIQDQKNLVFHLNSYRDKSLALELKIAF EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEE DCKVITVTHFSEWSSVIHDNLEKLRIILRKKETNELEDLIQKSFEEERTCYERMDQVISL EEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SNYMQELLYHDYGVDINRIIIIPNGMSDKIKEEVDQKRLRKKWHLYPEEQMIIFVGRLEE HHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHH IKGTHFLIRAFQLILQESPNCRLWIVGDGDYQNSFSEANPIFSKITFTGFVDQTSLFELY HCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCHHHHEEEEECCCHHHHHHHH RLADVGVVPSLFEPFGYVPVEMMMHELPIVATATSGLNEVVDESCGLKVPLIVSPDSVEI HHHHCCCCHHHHCCCCCCHHHHHHHHCCEEEECCCCHHHHHHHCCCCEEEEEECCCCCCH DTSLLAQKIVYLLQNPKEAKRLGKNGRKRYLEKYSSEVFGKNMIAFYKSLFQECK HHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]