| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009500
Identifier: 150009500
GI number: 150009500
Start: 3480342
End: 3482483
Strand: Reverse
Name: 150009500
Synonym: BDI_2913
Alternate gene names: NA
Gene position: 3482483-3480342 (Counterclockwise)
Preceding gene: 150009501
Following gene: 150009492
Centisome position: 72.38
GC content: 47.39
Gene sequence:
>2142_bases ATGAAGTTGATGAAAAGAGTGTGGGCGGCTTTGTTGCTTTTAGCCGCTTCCGGCCAGTTATATGCCGATGAGGGCATGTG GGTGCTGAAGGAATTAAATAAGCAGAATTTGGCGAGAATGGCCGAGTTGGGTTTTACCCCATCCTATGATCAGTTGTATA GTGAGACGGATCCTTGCGTGGCGAACGCCGTGGTAATCTTCGGTGGGGGATGTACTGGTATTACGGTCTCTAACGAGGGA TTGATCTTCACGAATCACCATTGTGGTTTCGGAGCCATCCAGCAGTTGAGTAGTGTGGAGCACGACTATCTGAAAGATGG TTTTGTCTCTCAAAGTAAACAGGAAGAACTTCCGGTTCCAGGCTTGACAGTACGTTACCTGAAAGAGACCGTAGACGTGA GCGATCGTATCAACAGCCAGATCTCCGGTATCGAGGATGAGTTCCAGCGTTTGTCGGCGGCTGATTCTATCGGTCGTGTG ATTTGTGATTCCGTGGGAAATAATGAGTTCCTAGCGGCTGATGTTGTCCCTTTCTATAGCAATAATAAATATTTCTTGGT AGTGTACGATGTTTATCGTGACGTGCGTATGGTTTTCGCTCCGCCTAGCTCTATCGGTAAGTTCGGTGGCGATACGGATA ACTGGATGTGGCCTCGGCATACCGGTGATTTTTCCGTATTCCGTGTGTACGCCAACGCGGATAATAAACCGGCGGAATAC AATGCGGATAATAAGCCTTATACCCCGAGATATGTAGCGGAGGTGTCTATGCAAGGCTATCAAGATAAAGATTATGCCAT GACAATCGGTTTTCCGGGAAGCACGGATCGTTATTTGTGCTCTTGGGGCGTGCAACAGCGTATCGAGAATAGTAATAAGC CCCGTATCGAGGTGCGTGGCATCAAGCAGGGCATCTGGAAAGAGGCGATGTTGGCTAGCGACGCCGTACGTATCAAATAT GCCTCTAAGTATGCGGGAAGCTCCAATTATTGGAAGAACTCGATCGGTATGAATAAAGGATTGGCGAATCTAAACGTGAT CGAACGTAAACGTGCGGAGGAGACGGCCTTCGCTGATTGGGTAGCGAAAGATCAGGCCCGGGGCGCTAAATATGGCGAGG TCTTGAATTTGCTGGAAAAAGGATATACCTCGACCAATAAATATAGAGAGGCTTTGACCTATTTGAATGAGGCGTTTTCT AGTGGAGCGGAGATTATTCGTTTGGCCCGTATGGTGCAATCGGTGGATATTGAAGGAGCTACCCCGGAAGAGATTACTGT CTTTTTAGAGGATCGTATCCAACCGTTCTTCAAGGATTACGAGCCGTCTTTGGATCAGAAGGTACTGGCCGCGATGATGA AGATCGCGAAAGAACGTGTATCTCCGGAGTTCTTGCCGGATATTTATACGAGCGTTGATAAGAAGTATAAAGGAAATTAT GAGAAATATGCGGCGGATGTATTTAAGAAGACTTCCTTATTGTCGTACGACAAGATCGCCGAGATGTTGAGAAATCCGAA GCAATATGAGAAATTGAGAAAAGATCCGGCGGCGGAACTGAGCTTGTCCGTATTGGTGTCTATCTTCCAGTTACAGCAGT TGATGGGTGATGCGGAGTATGATATCGCTAAGGGAGAACGTTTGTATTTCGCGGGCTTGAAGGAGATGTATCCGGAGAAA GCCTTGTCTTCCGACGCTAATTTCACGATGCGTTTGAGCTATGGTTCTATCGGAGGGTATCGTCCTTATGATGCCGCATG GTACAATTATTACTCAACGGATAAAGGTATCCTAGAGAAAGAGGACCCGACGAGCGATGAGTTCTGGGTACAACCGGAGA TACTGGATCTGGTTCGTAGCCGTGATTTCGGACCTTACGCGAATGAAAAAGGGGAATTGCAGCTGTGCTTCCTCTCGAAC AATGATATCACGGGTGGTAATTCCGGTAGCCCGGTATTCGATAAGAACGCCCGTTTGATTGGACTTGCTTTCGACGGTAA CTGGGAGGCGATGAGTGGTGATATCGCTTTTGAACCGGATTTGCAACGTTGCATCGGCGTAGATATCCGCTATGTCCTTT TCATGATCGATAAATGGGGTAAATGCCCGAGGTTGATTGAGGAGTTGAAACTGGTTCGATGA
Upstream 100 bases:
>100_bases AAGATGCGGAACGTAAGAAGATCAAGGAATGGCTGTCGGCTCGTGTGGAAATGAAAAATATTAAATTACTAATCGAATAA TTTAGACTAATCAGAGTAGA
Downstream 100 bases:
>100_bases GAGAAAAAAGAGATGGGCATCCGTGATTTCCGCGGATGCCCATTCTAAGGAGCTTATAATGCCCATCGTAAGGTGCTTTG AATGCCTATTGTAAGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 713; Mature: 713
Protein sequence:
>713_residues MKLMKRVWAALLLLAASGQLYADEGMWVLKELNKQNLARMAELGFTPSYDQLYSETDPCVANAVVIFGGGCTGITVSNEG LIFTNHHCGFGAIQQLSSVEHDYLKDGFVSQSKQEELPVPGLTVRYLKETVDVSDRINSQISGIEDEFQRLSAADSIGRV ICDSVGNNEFLAADVVPFYSNNKYFLVVYDVYRDVRMVFAPPSSIGKFGGDTDNWMWPRHTGDFSVFRVYANADNKPAEY NADNKPYTPRYVAEVSMQGYQDKDYAMTIGFPGSTDRYLCSWGVQQRIENSNKPRIEVRGIKQGIWKEAMLASDAVRIKY ASKYAGSSNYWKNSIGMNKGLANLNVIERKRAEETAFADWVAKDQARGAKYGEVLNLLEKGYTSTNKYREALTYLNEAFS SGAEIIRLARMVQSVDIEGATPEEITVFLEDRIQPFFKDYEPSLDQKVLAAMMKIAKERVSPEFLPDIYTSVDKKYKGNY EKYAADVFKKTSLLSYDKIAEMLRNPKQYEKLRKDPAAELSLSVLVSIFQLQQLMGDAEYDIAKGERLYFAGLKEMYPEK ALSSDANFTMRLSYGSIGGYRPYDAAWYNYYSTDKGILEKEDPTSDEFWVQPEILDLVRSRDFGPYANEKGELQLCFLSN NDITGGNSGSPVFDKNARLIGLAFDGNWEAMSGDIAFEPDLQRCIGVDIRYVLFMIDKWGKCPRLIEELKLVR
Sequences:
>Translated_713_residues MKLMKRVWAALLLLAASGQLYADEGMWVLKELNKQNLARMAELGFTPSYDQLYSETDPCVANAVVIFGGGCTGITVSNEG LIFTNHHCGFGAIQQLSSVEHDYLKDGFVSQSKQEELPVPGLTVRYLKETVDVSDRINSQISGIEDEFQRLSAADSIGRV ICDSVGNNEFLAADVVPFYSNNKYFLVVYDVYRDVRMVFAPPSSIGKFGGDTDNWMWPRHTGDFSVFRVYANADNKPAEY NADNKPYTPRYVAEVSMQGYQDKDYAMTIGFPGSTDRYLCSWGVQQRIENSNKPRIEVRGIKQGIWKEAMLASDAVRIKY ASKYAGSSNYWKNSIGMNKGLANLNVIERKRAEETAFADWVAKDQARGAKYGEVLNLLEKGYTSTNKYREALTYLNEAFS SGAEIIRLARMVQSVDIEGATPEEITVFLEDRIQPFFKDYEPSLDQKVLAAMMKIAKERVSPEFLPDIYTSVDKKYKGNY EKYAADVFKKTSLLSYDKIAEMLRNPKQYEKLRKDPAAELSLSVLVSIFQLQQLMGDAEYDIAKGERLYFAGLKEMYPEK ALSSDANFTMRLSYGSIGGYRPYDAAWYNYYSTDKGILEKEDPTSDEFWVQPEILDLVRSRDFGPYANEKGELQLCFLSN NDITGGNSGSPVFDKNARLIGLAFDGNWEAMSGDIAFEPDLQRCIGVDIRYVLFMIDKWGKCPRLIEELKLVR >Mature_713_residues MKLMKRVWAALLLLAASGQLYADEGMWVLKELNKQNLARMAELGFTPSYDQLYSETDPCVANAVVIFGGGCTGITVSNEG LIFTNHHCGFGAIQQLSSVEHDYLKDGFVSQSKQEELPVPGLTVRYLKETVDVSDRINSQISGIEDEFQRLSAADSIGRV ICDSVGNNEFLAADVVPFYSNNKYFLVVYDVYRDVRMVFAPPSSIGKFGGDTDNWMWPRHTGDFSVFRVYANADNKPAEY NADNKPYTPRYVAEVSMQGYQDKDYAMTIGFPGSTDRYLCSWGVQQRIENSNKPRIEVRGIKQGIWKEAMLASDAVRIKY ASKYAGSSNYWKNSIGMNKGLANLNVIERKRAEETAFADWVAKDQARGAKYGEVLNLLEKGYTSTNKYREALTYLNEAFS SGAEIIRLARMVQSVDIEGATPEEITVFLEDRIQPFFKDYEPSLDQKVLAAMMKIAKERVSPEFLPDIYTSVDKKYKGNY EKYAADVFKKTSLLSYDKIAEMLRNPKQYEKLRKDPAAELSLSVLVSIFQLQQLMGDAEYDIAKGERLYFAGLKEMYPEK ALSSDANFTMRLSYGSIGGYRPYDAAWYNYYSTDKGILEKEDPTSDEFWVQPEILDLVRSRDFGPYANEKGELQLCFLSN NDITGGNSGSPVFDKNARLIGLAFDGNWEAMSGDIAFEPDLQRCIGVDIRYVLFMIDKWGKCPRLIEELKLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80621; Mature: 80621
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMKRVWAALLLLAASGQLYADEGMWVLKELNKQNLARMAELGFTPSYDQLYSETDPCV CHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCHHHHHHHHHHCCCCCHHHHHCCCCCHH ANAVVIFGGGCTGITVSNEGLIFTNHHCGFGAIQQLSSVEHDYLKDGFVSQSKQEELPVP HCEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GLTVRYLKETVDVSDRINSQISGIEDEFQRLSAADSIGRVICDSVGNNEFLAADVVPFYS CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEC NNKYFLVVYDVYRDVRMVFAPPSSIGKFGGDTDNWMWPRHTGDFSVFRVYANADNKPAEY CCEEEEEEEEHHHCCEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC NADNKPYTPRYVAEVSMQGYQDKDYAMTIGFPGSTDRYLCSWGVQQRIENSNKPRIEVRG CCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC IKQGIWKEAMLASDAVRIKYASKYAGSSNYWKNSIGMNKGLANLNVIERKRAEETAFADW CHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VAKDQARGAKYGEVLNLLEKGYTSTNKYREALTYLNEAFSSGAEIIRLARMVQSVDIEGA HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC TPEEITVFLEDRIQPFFKDYEPSLDQKVLAAMMKIAKERVSPEFLPDIYTSVDKKYKGNY CHHHEEEHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH EKYAADVFKKTSLLSYDKIAEMLRNPKQYEKLRKDPAAELSLSVLVSIFQLQQLMGDAEY HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC DIAKGERLYFAGLKEMYPEKALSSDANFTMRLSYGSIGGYRPYDAAWYNYYSTDKGILEK CCCCCCEEEECCHHHHCHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHEEECCCCCCCCC EDPTSDEFWVQPEILDLVRSRDFGPYANEKGELQLCFLSNNDITGGNSGSPVFDKNARLI CCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE GLAFDGNWEAMSGDIAFEPDLQRCIGVDIRYVLFMIDKWGKCPRLIEELKLVR EEEECCCCCEECCCEEECCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MKLMKRVWAALLLLAASGQLYADEGMWVLKELNKQNLARMAELGFTPSYDQLYSETDPCV CHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHCHHHHHHHHHHCCCCCHHHHHCCCCCHH ANAVVIFGGGCTGITVSNEGLIFTNHHCGFGAIQQLSSVEHDYLKDGFVSQSKQEELPVP HCEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GLTVRYLKETVDVSDRINSQISGIEDEFQRLSAADSIGRVICDSVGNNEFLAADVVPFYS CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEC NNKYFLVVYDVYRDVRMVFAPPSSIGKFGGDTDNWMWPRHTGDFSVFRVYANADNKPAEY CCEEEEEEEEHHHCCEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC NADNKPYTPRYVAEVSMQGYQDKDYAMTIGFPGSTDRYLCSWGVQQRIENSNKPRIEVRG CCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEC IKQGIWKEAMLASDAVRIKYASKYAGSSNYWKNSIGMNKGLANLNVIERKRAEETAFADW CHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHH VAKDQARGAKYGEVLNLLEKGYTSTNKYREALTYLNEAFSSGAEIIRLARMVQSVDIEGA HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCC TPEEITVFLEDRIQPFFKDYEPSLDQKVLAAMMKIAKERVSPEFLPDIYTSVDKKYKGNY CHHHEEEHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH EKYAADVFKKTSLLSYDKIAEMLRNPKQYEKLRKDPAAELSLSVLVSIFQLQQLMGDAEY HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC DIAKGERLYFAGLKEMYPEKALSSDANFTMRLSYGSIGGYRPYDAAWYNYYSTDKGILEK CCCCCCEEEECCHHHHCHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHEEECCCCCCCCC EDPTSDEFWVQPEILDLVRSRDFGPYANEKGELQLCFLSNNDITGGNSGSPVFDKNARLI CCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEE GLAFDGNWEAMSGDIAFEPDLQRCIGVDIRYVLFMIDKWGKCPRLIEELKLVR EEEECCCCCEECCCEEECCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA