BacMap

Definition	Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession	NC_009615
Length	4,811,379

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The map label for this gene is cshA [H]

Identifier: 150009493

GI number: 150009493

Start: 3468400

End: 3470232

Strand: Direct

Name: cshA [H]

Synonym: BDI_2906

Alternate gene names: 150009493

Gene position: 3468400-3470232 (Clockwise)

Preceding gene: 150009489

Following gene: 150009494

Centisome position: 72.09

GC content: 48.72

Gene sequence:

>1833_bases
TTGAAAACATTTGAAGAATTAGGAGTTGCCGCACCGATATTAAAGGCAATCCAAGAGATGGGCTACGAATCGCCCATGCC
CGTACAGGAAGAAGTGATTCCTTTCTTACTGGGAGAAGATAACGACGTAATCGCATTGGCACAAACAGGAACCGGCAAGA
CAGCCGCTTACGGCCTGCCGATCCTGCAAAAGATCAATGTCTCTCAATATCAGCCTCAAGCGCTTATCCTTTGTCCGACA
CGCGAGCTTTGCCTACAGATAGCGGACGATTTGAACGATTATTCTAAATACATCGATAACCTGAAGGTTCTCCCTGTATA
CGGAGGTTCCAGTATAGAGAGCCAGATCAAGACACTGAAGAGAGGCGTACACGTGGTAGTGGCTACCCCGGGACGTTTGA
TCGACTTGATGAACCGCAAGACGGTTGACTTAAGCAACGTAAAGAACGTCATTCTTGATGAGGCGGACGAGATGTTGAAC
ATGGGTTTCACCGACAGTATCAACGAGATCTTGGCGGCTATACCGGAAAACCGCAATATGCTGCTCTTCTCCGCTACCAT
GCCGAAAGAGATTGCCTCTATCACCAAGAAATACATGAAGGACCCGAAAGAGATCGTCATTGGCAGGAAGAACGAGGGAA
ACAAGAATATCCGCGATATCTATTACATGGTTCGTGCGCAGGATAAATATCTCGCGTTGAAACGTCTAGCCGATTATTAC
CCGAACATCTACGGTATCATCTTCTGCCGTACCCGTAAGGAGACACAGGAGATCGCCGATAAATTGATTCAAGACGGCTA
TAACGCCGACTCCTTGCACGGCGAGCTGAGCCAAGCGCAACGTGATTACGTGATGCAGAAGTTCCGTATCAAGAATATCC
AGTTATTGGTCGCTACGGACGTAGCCGCACGTGGTTTGGACGTGGATGACTTAACCCATGTAATCAATTACGGTCTGCCG
GATGAGGTAGAATCTTATACCCACCGCCGCGGACGTACGGGCCGTGCGGGAAAAACGGGTATCGCTATCTCTATCTGCCA
CGTAAGGGAAAAAGGCAAGATCCGCGAGATCGAACGAATCATTAACAAGAAATTCGATAAAGGCAAGATGCCTACCGGTG
AGCAAATCTGTGAGAAGCAATTGTTCAACTTGGTGGACCAGATCGAGAAAGTGAAAGTGAACGAGGAGGAAATCGCTAGT
TTGATGCCTTCTATCTACCGTAAATTGGAATGGCTGGATAAGGAAGATATCATCAAGCGTGTCGTATCCTTGGAGTTCAA
CCGGATGATCGACTATTATAAAGATAACGATGATATCGAGGTTGTAGACGAGAGCGCCCCAAGAGAAAGAGGCAAACGTG
GTGGTAGAGGCGAAGCGGAAGAAGGCTACACCCGTTTCTTTATCAACTTTGGAAAGACAGACGAGCTTACACCTCCTCAA
CTTATAGAGTTGGTTAATAAGTGTGTACCGGGTAAGGTTCGTATCGGTCGTATCGACTTACGTGATAATTTCTCATTCTT
CGAGGTAGAAGAGGGAGAAGCCAACCGTGTCATGGACTCGATGAACGGCTTCGAGGTAGACGGACGACGTATCTCCGTAG
AACCGGCGCAAGCGAAAGGCGAAGGTGGTAAAGGCAGTCGTGGTAGCCGTGGAGGTAGCCGTAGCGGAAACGGTTTCAGA
GACCGACGGGATAGCGGTAGAAAAGGCAGAGATAGCCGTCGGGAAAGCGACCGTGGAGACCGTGGCGGTAGACGTTCCGG
CCGTGGCGATGACAAACCGAAGCGTAAATTCTATGAGGACGCTCCTCGTGGAAAGAAAAAACGCAGTAAATAA

Upstream 100 bases:

>100_bases
CGCTGATTTTTAGCGAATTTAGCATAACAATCCTATAGAATCCGAATTATTTACGTACCTTTGCGGCCACTGAATATTAT
CATATATACACAATCGCATT

Downstream 100 bases:

>100_bases
AAATAGATATTCATAACCCTTCCTAATGAGCTCGGCATCGAACCGGGCTCATTTTTTAATTAAGGTTATAAAGGTCTTAA
ATTATGCGTACCTACAAAGT

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MKTFEELGVAAPILKAIQEMGYESPMPVQEEVIPFLLGEDNDVIALAQTGTGKTAAYGLPILQKINVSQYQPQALILCPT
RELCLQIADDLNDYSKYIDNLKVLPVYGGSSIESQIKTLKRGVHVVVATPGRLIDLMNRKTVDLSNVKNVILDEADEMLN
MGFTDSINEILAAIPENRNMLLFSATMPKEIASITKKYMKDPKEIVIGRKNEGNKNIRDIYYMVRAQDKYLALKRLADYY
PNIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDYVMQKFRIKNIQLLVATDVAARGLDVDDLTHVINYGLP
DEVESYTHRRGRTGRAGKTGIAISICHVREKGKIREIERIINKKFDKGKMPTGEQICEKQLFNLVDQIEKVKVNEEEIAS
LMPSIYRKLEWLDKEDIIKRVVSLEFNRMIDYYKDNDDIEVVDESAPRERGKRGGRGEAEEGYTRFFINFGKTDELTPPQ
LIELVNKCVPGKVRIGRIDLRDNFSFFEVEEGEANRVMDSMNGFEVDGRRISVEPAQAKGEGGKGSRGSRGGSRSGNGFR
DRRDSGRKGRDSRRESDRGDRGGRRSGRGDDKPKRKFYEDAPRGKKKRSK

Sequences:

>Translated_610_residues
MKTFEELGVAAPILKAIQEMGYESPMPVQEEVIPFLLGEDNDVIALAQTGTGKTAAYGLPILQKINVSQYQPQALILCPT
RELCLQIADDLNDYSKYIDNLKVLPVYGGSSIESQIKTLKRGVHVVVATPGRLIDLMNRKTVDLSNVKNVILDEADEMLN
MGFTDSINEILAAIPENRNMLLFSATMPKEIASITKKYMKDPKEIVIGRKNEGNKNIRDIYYMVRAQDKYLALKRLADYY
PNIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDYVMQKFRIKNIQLLVATDVAARGLDVDDLTHVINYGLP
DEVESYTHRRGRTGRAGKTGIAISICHVREKGKIREIERIINKKFDKGKMPTGEQICEKQLFNLVDQIEKVKVNEEEIAS
LMPSIYRKLEWLDKEDIIKRVVSLEFNRMIDYYKDNDDIEVVDESAPRERGKRGGRGEAEEGYTRFFINFGKTDELTPPQ
LIELVNKCVPGKVRIGRIDLRDNFSFFEVEEGEANRVMDSMNGFEVDGRRISVEPAQAKGEGGKGSRGSRGGSRSGNGFR
DRRDSGRKGRDSRRESDRGDRGGRRSGRGDDKPKRKFYEDAPRGKKKRSK
>Mature_610_residues
MKTFEELGVAAPILKAIQEMGYESPMPVQEEVIPFLLGEDNDVIALAQTGTGKTAAYGLPILQKINVSQYQPQALILCPT
RELCLQIADDLNDYSKYIDNLKVLPVYGGSSIESQIKTLKRGVHVVVATPGRLIDLMNRKTVDLSNVKNVILDEADEMLN
MGFTDSINEILAAIPENRNMLLFSATMPKEIASITKKYMKDPKEIVIGRKNEGNKNIRDIYYMVRAQDKYLALKRLADYY
PNIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDYVMQKFRIKNIQLLVATDVAARGLDVDDLTHVINYGLP
DEVESYTHRRGRTGRAGKTGIAISICHVREKGKIREIERIINKKFDKGKMPTGEQICEKQLFNLVDQIEKVKVNEEEIAS
LMPSIYRKLEWLDKEDIIKRVVSLEFNRMIDYYKDNDDIEVVDESAPRERGKRGGRGEAEEGYTRFFINFGKTDELTPPQ
LIELVNKCVPGKVRIGRIDLRDNFSFFEVEEGEANRVMDSMNGFEVDGRRISVEPAQAKGEGGKGSRGSRGGSRSGNGFR
DRRDSGRKGRDSRRESDRGDRGGRRSGRGDDKPKRKFYEDAPRGKKKRSK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=375, Percent_Identity=35.4666666666667, Blast_Score=251, Evalue=2e-66,
Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=37.6068376068376, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=37.6068376068376, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=37.8016085790885, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=37.8016085790885, Blast_Score=244, Evalue=3e-64,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=37.8016085790885, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=37.940379403794, Blast_Score=243, Evalue=5e-64,
Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=37.940379403794, Blast_Score=243, Evalue=5e-64,
Organism=Homo sapiens, GI20149629, Length=388, Percent_Identity=35.8247422680412, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI50659095, Length=415, Percent_Identity=33.9759036144578, Blast_Score=235, Evalue=1e-61,
Organism=Homo sapiens, GI13129006, Length=428, Percent_Identity=33.411214953271, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=36.4902506963788, Blast_Score=232, Evalue=1e-60,
Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=36.6946778711485, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI164664518, Length=355, Percent_Identity=34.3661971830986, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI224593278, Length=402, Percent_Identity=34.0796019900498, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI148613856, Length=397, Percent_Identity=34.0050377833753, Blast_Score=228, Evalue=2e-59,
Organism=Homo sapiens, GI38201710, Length=397, Percent_Identity=34.0050377833753, Blast_Score=228, Evalue=2e-59,
Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=35.042735042735, Blast_Score=228, Evalue=2e-59,
Organism=Homo sapiens, GI41327771, Length=398, Percent_Identity=32.6633165829146, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI4503529, Length=379, Percent_Identity=34.3007915567282, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=35.933147632312, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI4758138, Length=351, Percent_Identity=36.4672364672365, Blast_Score=223, Evalue=5e-58,
Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=35.933147632312, Blast_Score=223, Evalue=6e-58,
Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=35.933147632312, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI83700235, Length=378, Percent_Identity=34.9206349206349, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=35.933147632312, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=32.5648414985591, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=32.5648414985591, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI55749865, Length=359, Percent_Identity=33.1476323119777, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI8922886, Length=378, Percent_Identity=34.6560846560847, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI164419732, Length=384, Percent_Identity=35.15625, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI6005743, Length=378, Percent_Identity=34.3915343915344, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI188035877, Length=385, Percent_Identity=32.7272727272727, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI21040371, Length=355, Percent_Identity=33.2394366197183, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI4758112, Length=355, Percent_Identity=32.9577464788732, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI18375623, Length=355, Percent_Identity=32.9577464788732, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=34.8167539267016, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI41327776, Length=388, Percent_Identity=32.4742268041237, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI62241022, Length=359, Percent_Identity=34.5403899721448, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI256223453, Length=353, Percent_Identity=31.4447592067989, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI62241024, Length=336, Percent_Identity=34.5238095238095, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI41327779, Length=352, Percent_Identity=31.8181818181818, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI38569505, Length=381, Percent_Identity=29.6587926509186, Blast_Score=171, Evalue=3e-42,
Organism=Homo sapiens, GI38569503, Length=381, Percent_Identity=29.6587926509186, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=29.4765840220386, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI38327634, Length=397, Percent_Identity=28.7153652392947, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=25.1256281407035, Blast_Score=140, Evalue=4e-33,
Organism=Homo sapiens, GI154759257, Length=400, Percent_Identity=26.5, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI256773275, Length=395, Percent_Identity=26.0759493670886, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI9966805, Length=351, Percent_Identity=27.6353276353276, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI17505907, Length=227, Percent_Identity=32.15859030837, Blast_Score=116, Evalue=6e-26,
Organism=Homo sapiens, GI20336298, Length=227, Percent_Identity=32.15859030837, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI4826686, Length=143, Percent_Identity=36.3636363636364, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI4557365, Length=343, Percent_Identity=26.530612244898, Blast_Score=79, Evalue=2e-14,
Organism=Escherichia coli, GI87082221, Length=388, Percent_Identity=42.0103092783505, Blast_Score=335, Evalue=4e-93,
Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=41.3333333333333, Blast_Score=295, Evalue=5e-81,
Organism=Escherichia coli, GI1787605, Length=377, Percent_Identity=39.5225464190981, Blast_Score=281, Evalue=8e-77,
Organism=Escherichia coli, GI1790214, Length=356, Percent_Identity=33.7078651685393, Blast_Score=201, Evalue=1e-52,
Organism=Escherichia coli, GI1788930, Length=392, Percent_Identity=35.4591836734694, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI48994977, Length=355, Percent_Identity=23.943661971831, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71987143, Length=360, Percent_Identity=37.5, Blast_Score=271, Evalue=1e-72,
Organism=Caenorhabditis elegans, GI71995724, Length=375, Percent_Identity=37.0666666666667, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17507121, Length=375, Percent_Identity=36.8, Blast_Score=259, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI17555296, Length=372, Percent_Identity=38.9784946236559, Blast_Score=254, Evalue=9e-68,
Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=36.2204724409449, Blast_Score=239, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=382, Percent_Identity=36.3874345549738, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17510307, Length=382, Percent_Identity=36.3874345549738, Blast_Score=236, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=37.3595505617978, Blast_Score=236, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI71995514, Length=382, Percent_Identity=36.3874345549738, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=35.6020942408377, Blast_Score=235, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI115533224, Length=365, Percent_Identity=35.3424657534247, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17552114, Length=356, Percent_Identity=34.2696629213483, Blast_Score=227, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17510559, Length=389, Percent_Identity=35.9897172236504, Blast_Score=225, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=36.8146214099217, Blast_Score=224, Evalue=9e-59,
Organism=Caenorhabditis elegans, GI115532546, Length=383, Percent_Identity=36.8146214099217, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=34.7826086956522, Blast_Score=223, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=34.7826086956522, Blast_Score=223, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI71995718, Length=385, Percent_Identity=35.8441558441558, Blast_Score=221, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI17552642, Length=352, Percent_Identity=33.8068181818182, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=34.0782122905028, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17536101, Length=369, Percent_Identity=33.0623306233062, Blast_Score=199, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17536099, Length=369, Percent_Identity=33.0623306233062, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17536103, Length=369, Percent_Identity=33.0623306233062, Blast_Score=198, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=31.5028901734104, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=32.258064516129, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=32.258064516129, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=29.9191374663073, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17509811, Length=366, Percent_Identity=28.4153005464481, Blast_Score=168, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17553716, Length=348, Percent_Identity=29.5977011494253, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI193206561, Length=356, Percent_Identity=28.3707865168539, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=393, Percent_Identity=29.7709923664122, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=29.5514511873351, Blast_Score=158, Evalue=9e-39,
Organism=Caenorhabditis elegans, GI17505370, Length=377, Percent_Identity=31.8302387267904, Blast_Score=152, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=27.7922077922078, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI25148203, Length=414, Percent_Identity=25.6038647342995, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=379, Percent_Identity=28.2321899736148, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI71990816, Length=363, Percent_Identity=30.3030303030303, Blast_Score=144, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=27.4932614555256, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=34.8258706467662, Blast_Score=130, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI25148291, Length=355, Percent_Identity=27.3239436619718, Blast_Score=129, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=423, Percent_Identity=26.4775413711584, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI25148205, Length=347, Percent_Identity=22.7665706051873, Blast_Score=102, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=37.2727272727273, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI25145561, Length=346, Percent_Identity=21.6763005780347, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=36.7567567567568, Blast_Score=255, Evalue=1e-68,
Organism=Saccharomyces cerevisiae, GI6324778, Length=371, Percent_Identity=37.1967654986523, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6325138, Length=370, Percent_Identity=35.9459459459459, Blast_Score=239, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6324217, Length=364, Percent_Identity=37.3626373626374, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=35.792349726776, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=35.792349726776, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6320041, Length=357, Percent_Identity=35.2941176470588, Blast_Score=223, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=38.3977900552486, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6321856, Length=392, Percent_Identity=34.1836734693878, Blast_Score=219, Evalue=9e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=385, Percent_Identity=35.5844155844156, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=34.7826086956522, Blast_Score=213, Evalue=7e-56,
Organism=Saccharomyces cerevisiae, GI6324620, Length=359, Percent_Identity=34.2618384401114, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320119, Length=368, Percent_Identity=32.0652173913043, Blast_Score=196, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=33.4210526315789, Blast_Score=190, Evalue=7e-49,
Organism=Saccharomyces cerevisiae, GI6319714, Length=373, Percent_Identity=28.9544235924933, Blast_Score=185, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6323947, Length=403, Percent_Identity=31.5136476426799, Blast_Score=171, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6321267, Length=333, Percent_Identity=31.8318318318318, Blast_Score=170, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6322427, Length=384, Percent_Identity=27.8645833333333, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=377, Percent_Identity=32.6259946949602, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321111, Length=355, Percent_Identity=30.1408450704225, Blast_Score=160, Evalue=8e-40,
Organism=Saccharomyces cerevisiae, GI6319618, Length=427, Percent_Identity=28.1030444964871, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6320173, Length=229, Percent_Identity=31.8777292576419, Blast_Score=150, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=27.790973871734, Blast_Score=147, Evalue=5e-36,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=26.1494252873563, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6322876, Length=237, Percent_Identity=29.957805907173, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6321374, Length=463, Percent_Identity=22.4622030237581, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24645031, Length=376, Percent_Identity=34.8404255319149, Blast_Score=242, Evalue=5e-64,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=36.6946778711485, Blast_Score=242, Evalue=6e-64,
Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=37.0473537604457, Blast_Score=239, Evalue=5e-63,
Organism=Drosophila melanogaster, GI21355075, Length=405, Percent_Identity=33.5802469135802, Blast_Score=239, Evalue=6e-63,
Organism=Drosophila melanogaster, GI24583281, Length=356, Percent_Identity=34.5505617977528, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=34.5505617977528, Blast_Score=233, Evalue=3e-61,
Organism=Drosophila melanogaster, GI18857967, Length=385, Percent_Identity=35.8441558441558, Blast_Score=233, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24585582, Length=385, Percent_Identity=34.5454545454545, Blast_Score=232, Evalue=7e-61,
Organism=Drosophila melanogaster, GI28574962, Length=378, Percent_Identity=37.3015873015873, Blast_Score=231, Evalue=9e-61,
Organism=Drosophila melanogaster, GI24584399, Length=343, Percent_Identity=36.1516034985423, Blast_Score=230, Evalue=3e-60,
Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=35.3099730458221, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=34.9081364829396, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24582080, Length=370, Percent_Identity=34.8648648648649, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24582078, Length=370, Percent_Identity=34.8648648648649, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI17136248, Length=370, Percent_Identity=34.8648648648649, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24582075, Length=370, Percent_Identity=34.8648648648649, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=32.7913279132791, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24644479, Length=361, Percent_Identity=35.4570637119114, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24644483, Length=361, Percent_Identity=35.4570637119114, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI281361218, Length=361, Percent_Identity=35.4570637119114, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644481, Length=361, Percent_Identity=35.4570637119114, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644487, Length=361, Percent_Identity=35.4570637119114, Blast_Score=220, Evalue=3e-57,
Organism=Drosophila melanogaster, GI45551833, Length=361, Percent_Identity=35.4570637119114, Blast_Score=220, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24644485, Length=361, Percent_Identity=35.4570637119114, Blast_Score=220, Evalue=3e-57,
Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=33.6111111111111, Blast_Score=219, Evalue=6e-57,
Organism=Drosophila melanogaster, GI21356161, Length=369, Percent_Identity=33.8753387533875, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=32.3033707865169, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=32.3033707865169, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=32.3033707865169, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=36.5384615384615, Blast_Score=189, Evalue=7e-48,
Organism=Drosophila melanogaster, GI17136814, Length=391, Percent_Identity=32.2250639386189, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI21355559, Length=406, Percent_Identity=31.7733990147783, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI17647335, Length=399, Percent_Identity=28.8220551378446, Blast_Score=175, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24666101, Length=408, Percent_Identity=28.6764705882353, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28571808, Length=406, Percent_Identity=28.8177339901478, Blast_Score=160, Evalue=3e-39,
Organism=Drosophila melanogaster, GI28571809, Length=406, Percent_Identity=28.8177339901478, Blast_Score=160, Evalue=3e-39,
Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=26.8965517241379, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24642822, Length=362, Percent_Identity=29.8342541436464, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=28.9230769230769, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI18859659, Length=420, Percent_Identity=27.1428571428571, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI28571338, Length=420, Percent_Identity=27.1428571428571, Blast_Score=141, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24643725, Length=429, Percent_Identity=27.5058275058275, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI19920478, Length=372, Percent_Identity=29.0322580645161, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=24.1379310344828, Blast_Score=117, Evalue=3e-26,
Organism=Drosophila melanogaster, GI17136666, Length=406, Percent_Identity=26.1083743842365, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24646066, Length=356, Percent_Identity=24.438202247191, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 69157; Mature: 69157

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFEELGVAAPILKAIQEMGYESPMPVQEEVIPFLLGEDNDVIALAQTGTGKTAAYGLP
CCCHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCC
ILQKINVSQYQPQALILCPTRELCLQIADDLNDYSKYIDNLKVLPVYGGSSIESQIKTLK
HHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHH
RGVHVVVATPGRLIDLMNRKTVDLSNVKNVILDEADEMLNMGFTDSINEILAAIPENRNM
CCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
LLFSATMPKEIASITKKYMKDPKEIVIGRKNEGNKNIRDIYYMVRAQDKYLALKRLADYY
EEEECCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHC
PNIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDYVMQKFRIKNIQLLVATD
CCEEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
VAARGLDVDDLTHVINYGLPDEVESYTHRRGRTGRAGKTGIAISICHVREKGKIREIERI
HHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH
INKKFDKGKMPTGEQICEKQLFNLVDQIEKVKVNEEEIASLMPSIYRKLEWLDKEDIIKR
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
VVSLEFNRMIDYYKDNDDIEVVDESAPRERGKRGGRGEAEEGYTRFFINFGKTDELTPPQ
HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHH
LIELVNKCVPGKVRIGRIDLRDNFSFFEVEEGEANRVMDSMNGFEVDGRRISVEPAQAKG
HHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHCCCCEECCCEEEECCCCCCC
EGGKGSRGSRGGSRSGNGFRDRRDSGRKGRDSRRESDRGDRGGRRSGRGDDKPKRKFYED
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHC
APRGKKKRSK
CCCCCCCCCC
>Mature Secondary Structure
MKTFEELGVAAPILKAIQEMGYESPMPVQEEVIPFLLGEDNDVIALAQTGTGKTAAYGLP
CCCHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCC
ILQKINVSQYQPQALILCPTRELCLQIADDLNDYSKYIDNLKVLPVYGGSSIESQIKTLK
HHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHH
RGVHVVVATPGRLIDLMNRKTVDLSNVKNVILDEADEMLNMGFTDSINEILAAIPENRNM
CCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
LLFSATMPKEIASITKKYMKDPKEIVIGRKNEGNKNIRDIYYMVRAQDKYLALKRLADYY
EEEECCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHC
PNIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDYVMQKFRIKNIQLLVATD
CCEEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
VAARGLDVDDLTHVINYGLPDEVESYTHRRGRTGRAGKTGIAISICHVREKGKIREIERI
HHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHH
INKKFDKGKMPTGEQICEKQLFNLVDQIEKVKVNEEEIASLMPSIYRKLEWLDKEDIIKR
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
VVSLEFNRMIDYYKDNDDIEVVDESAPRERGKRGGRGEAEEGYTRFFINFGKTDELTPPQ
HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHH
LIELVNKCVPGKVRIGRIDLRDNFSFFEVEEGEANRVMDSMNGFEVDGRRISVEPAQAKG
HHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHCCCCEECCCEEEECCCCCCC
EGGKGSRGSRGGSRSGNGFRDRRDSGRKGRDSRRESDRGDRGGRRSGRGDDKPKRKFYED
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHC
APRGKKKRSK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA