| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009491
Identifier: 150009491
GI number: 150009491
Start: 3466442
End: 3467380
Strand: Reverse
Name: 150009491
Synonym: BDI_2904
Alternate gene names: NA
Gene position: 3467380-3466442 (Counterclockwise)
Preceding gene: 150009492
Following gene: 150009490
Centisome position: 72.07
GC content: 36.63
Gene sequence:
>939_bases TTGTATTATGAAAAAACTTTTTTAATTATTAGTGTTTTATTGGGTATATTGTTTTATCCTGTAAATGCTCAACAGCGAAT AGTGGAGGGATCTAATATCAATATATCAGAGGTTCCTTGGCAGGTTGCGATTCAAACGAAAGGTGTTTTTAACGGAGGAG GGTCTATATTGGCTCCAAACTTGATTTTAACAGCTGCTCATGTGGTGGAAAAATATACTGCAAAAGAGGTTAAAGTGGGA GTTGGTAGTTCTAAATATTCAAATATTGGTGCGAATTGGTATTCTGTTTCAAATATTGTTTATCACCCTTCTTTGGATAT TGCTTTATTAATATTGTCTAGGCCTTTGTCTTATTCTACAAATGTAAAAGCTATAGATATTCTTTCAGCTAATAAGGCTT CTTATTATAATGTAGGAAATATACTTCGAGTTACAGGTTGGGGGATTACTTTTCTTGTGATTGATGATCCTTTTAAAGAA TGGAAAATGTCAGATGATTTAAAAAAGGTAGATCTTCCTATTGTTTCAAATTCTACTATAGGAGCTGCTAATAGTTTTGT TATTACATATGATGGTAAGCATAGTCCTTCTAAAGGTGATAGTGGTGGAGCATTGACAATTTGGGATTCTTCTTTACAGA GACATGTTGTAATTGGAACTGTACATGGAAATCCTAGTACTCAGAGAGCTTATTGTGCGTATGTTCGATCTTCCTCCTTC CTCGACTTCCTCCTTCCTTACTATCCCATATCCATCACCGGTGGTTCAGACCAAGTCTGTTCTTCTTCAACATTCTCTGT AAGTTATCCAAACTCCACAGTTACTTGGTCATGCACGGGGCCTTTGCGAATAACCTCGCAAAGCAATACTTCTTGTACGG TCTCTTCTACCGGTAACGGACCTGCCGTATTGAAAGCCACAATCAAGAGCGGAAAGTAA
Upstream 100 bases:
>100_bases GGGATAGAAAGAGATATCCATTGTGTAAATCGGATTCCTCAGTAATTGATATTTCTGTACTTTCTGTTCGAGAATTGAAT GAATAAACTTTTTAATATGA
Downstream 100 bases:
>100_bases TTAGTGGAGGCTATACCTCTTGTATGATCACCTATCGGAACACTGTGAATGGAAACGATACATGGTGTACGAGCCATTCC GGAAATATCTTCACCATCGA
Product: putative serine protease
Products: NA
Alternate protein names: Trypsin-Like Serine Protease; Peptidase S1a Subfamily; Hypodermin-A
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPNLILTAAHVVEKYTAKEVKVG VGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYSTNVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKE WKMSDDLKKVDLPIVSNSTIGAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNGPAVLKATIKSGK
Sequences:
>Translated_312_residues MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPNLILTAAHVVEKYTAKEVKVG VGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYSTNVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKE WKMSDDLKKVDLPIVSNSTIGAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNGPAVLKATIKSGK >Mature_312_residues MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPNLILTAAHVVEKYTAKEVKVG VGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYSTNVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKE WKMSDDLKKVDLPIVSNSTIGAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNGPAVLKATIKSGK
Specific function: Unknown
COG id: COG5640
COG function: function code O; Secreted trypsin-like serine protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4506153, Length=213, Percent_Identity=30.9859154929577, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI66347875, Length=254, Percent_Identity=24.8031496062992, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI13173471, Length=241, Percent_Identity=28.2157676348548, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI78191798, Length=244, Percent_Identity=27.4590163934426, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI291167777, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI291167775, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI145701030, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI15451940, Length=241, Percent_Identity=29.8755186721992, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI18859959, Length=246, Percent_Identity=28.0487804878049, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI20129689, Length=199, Percent_Identity=31.1557788944724, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581459, Length=197, Percent_Identity=31.4720812182741, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652712, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652714, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652710, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24652708, Length=194, Percent_Identity=30.4123711340206, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24581087, Length=218, Percent_Identity=31.651376146789, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI17986089, Length=164, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707268, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI78707270, Length=198, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI17933738, Length=198, Percent_Identity=29.7979797979798, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920566, Length=148, Percent_Identity=32.4324324324324, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI281362515, Length=139, Percent_Identity=33.8129496402878, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24647630, Length=204, Percent_Identity=31.8627450980392, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24584310, Length=113, Percent_Identity=36.283185840708, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI221330452, Length=204, Percent_Identity=29.9019607843137, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221474989, Length=222, Percent_Identity=27.9279279279279, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24653378, Length=224, Percent_Identity=29.0178571428571, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358525, Length=211, Percent_Identity=27.4881516587678, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24581077, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24658930, Length=137, Percent_Identity=31.3868613138686, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24653960, Length=203, Percent_Identity=26.6009852216749, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI17136562, Length=194, Percent_Identity=31.4432989690722, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI19922026, Length=238, Percent_Identity=27.7310924369748, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33619; Mature: 33619
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00135 TRYPSIN_SER ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPN CCCCHHHHHHHHHHHHHEECCCCHHEEECCCCCEEECCCEEEEEEECEEECCCCCEECCH LILTAAHVVEKYTAKEVKVGVGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYST HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECEEEECCCCCEEEEEEECCCCCCC NVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKEWKMSDDLKKVDLPIVSNSTI CCEEEEEEECCCCCEEECCCEEEEECCCEEEEEECCCHHHCCCCCCCHHCCCEEECCCCC GAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF CCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCCCC LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNG HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCEEEEEECCCC PAVLKATIKSGK CEEEEEEECCCC >Mature Secondary Structure MYYEKTFLIISVLLGILFYPVNAQQRIVEGSNINISEVPWQVAIQTKGVFNGGGSILAPN CCCCHHHHHHHHHHHHHEECCCCHHEEECCCCCEEECCCEEEEEEECEEECCCCCEECCH LILTAAHVVEKYTAKEVKVGVGSSKYSNIGANWYSVSNIVYHPSLDIALLILSRPLSYST HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECEEEECCCCCEEEEEEECCCCCCC NVKAIDILSANKASYYNVGNILRVTGWGITFLVIDDPFKEWKMSDDLKKVDLPIVSNSTI CCEEEEEEECCCCCEEECCCEEEEECCCEEEEEECCCHHHCCCCCCCHHCCCEEECCCCC GAANSFVITYDGKHSPSKGDSGGALTIWDSSLQRHVVIGTVHGNPSTQRAYCAYVRSSSF CCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCEEEEEECCCCC LDFLLPYYPISITGGSDQVCSSSTFSVSYPNSTVTWSCTGPLRITSQSNTSCTVSSTGNG HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCCEEEEEECCCC PAVLKATIKSGK CEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA